RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 SPIN3Q5JUX0 258 aa3.34□□□□□ -1.87
COPA-203ENST00000481040 HES3Q5TGS1 186 aa3.34□□□□□ -1.87
COPA-203ENST00000481040 CYHR1Q6ZMK1 362 aa3.34□□□□□ -1.87
COPA-203ENST00000481040 YIPF7Q8N8F6 280 aa3.34□□□□□ -1.87
COPA-203ENST00000481040 OR2V1Q8NHB1 315 aa3.34□□□□□ -1.87
COPA-203ENST00000481040 SPPL2BQ8TCT7 592 aa3.34□□□□□ -1.87
COPA-203ENST00000481040 MAL2Q969L2 176 aa3.34□□□□□ -1.87
COPA-203ENST00000481040 ACY3Q96HD9 319 aa3.34□□□□□ -1.87
COPA-203ENST00000481040 FOPNLQ96NB1 174 aa3.34□□□□□ -1.87
COPA-203ENST00000481040 EIF5A2Q9GZV4 153 aaKnown RBP3.34□□□□□ -1.87
COPA-203ENST00000481040 GTSF1LQ9H1H1 148 aa3.34□□□□□ -1.87
COPA-203ENST00000481040 NPATQ14207 1427 aa3.34□□□□□ -1.88
COPA-203ENST00000481040 ATRXP46100 2492 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 IGHV3-43A0A0B4J1X8 118 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 B4DEV8 164 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 D6RAR5 112 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 MED6O75586 246 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 NRASP01111 189 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 HRASP01112 189 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 KRASP01116 189 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 LHBP01229 141 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 LTAP01374 205 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 OR13C7P0DN81 318 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 OR12D1P0DN82 309 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 OR4D2P58180 307 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 ARF6P62330 175 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 EBLN2Q6P2I7 272 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 SFXN4Q6P4A7 337 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 NEGR1Q7Z3B1 354 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 ATP5L2Q7Z4Y8 100 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 NIT1Q86X76 327 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 FRZBQ92765 325 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 IP6K3Q96PC2 410 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 OR52B2Q96RD2 323 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 PECRQ9BY49 303 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 GNB1LQ9BYB4 327 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 VCXQ9H320 206 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 LINC00574Q9H8X3 128 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 ANAPC11Q9NYG5 84 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 OPN4Q9UHM6 478 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 CELA1Q9UNI1 258 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 ERCC6L2Q5T890 1561 aa3.33□□□□□ -1.88
COPA-203ENST00000481040 NACAE9PAV3 2078 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 C5orf49A4QMS7 147 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 CLDN24A6NM45 220 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 FADS1O60427 444 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 CDRT1O95170 752 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 FBP1P09467 338 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 CD36P16671 472 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 ORM2P19652 201 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 ALOX5APP20292 161 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 DDTP30046 118 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 RAB5BP61020 215 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 VBP1P61758 197 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 RPS24P62847 133 aaKnown RBP3.32□□□□□ -1.88
COPA-203ENST00000481040 HLA-DRB3P79483 266 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 FABP5Q01469 135 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 ZNF816Q0VGE8 651 aaPredicted RBP3.32□□□□□ -1.88
COPA-203ENST00000481040 MMDQ15546 238 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 TIFABQ6ZNK6 161 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 AMN1Q8IY45 258 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 CLDN22Q8N7P3 220 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 TMEM105Q8N8V8 129 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 ZFP62Q8NB50 900 aaPredicted RBP3.32□□□□□ -1.88
COPA-203ENST00000481040 TMA16Q96EY4 203 aaKnown RBP3.32□□□□□ -1.88
COPA-203ENST00000481040 OR2V2Q96R30 315 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 SHANK2-AS3Q9BTD1 123 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 PLA2G12AQ9BZM1 189 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 HES4Q9HCC6 221 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 IL37Q9NZH6 218 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 ZNF492Q9P255 531 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 VPS29Q9UBQ0 182 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 FLT4P35916 1363 aa3.32□□□□□ -1.88
COPA-203ENST00000481040 H3BSA7 217 aa3.31□□□□□ -1.88
COPA-203ENST00000481040 K7EQS6 105 aa3.31□□□□□ -1.88
COPA-203ENST00000481040 K7ERS5 55 aa3.31□□□□□ -1.88
COPA-203ENST00000481040 PTHLHP12272 177 aa3.31□□□□□ -1.88
COPA-203ENST00000481040 HSPA9P38646 679 aaKnown RBP3.31□□□□□ -1.88
COPA-203ENST00000481040 SNAP25P60880 206 aa3.31□□□□□ -1.88
COPA-203ENST00000481040 EMX1Q04741 257 aaPredicted RBP3.31□□□□□ -1.88
COPA-203ENST00000481040 JOSD1Q15040 202 aaPredicted RBP3.31□□□□□ -1.88
COPA-203ENST00000481040 PTGES3Q15185 160 aaKnown RBP3.31□□□□□ -1.88
COPA-203ENST00000481040 SPA17Q15506 151 aa3.31□□□□□ -1.88
COPA-203ENST00000481040 LINC00483Q53H64 154 aa3.31□□□□□ -1.88
COPA-203ENST00000481040 UNQ9165/PRO28630Q6UXU0 137 aa3.31□□□□□ -1.88
COPA-203ENST00000481040 TMEM144Q7Z5S9 345 aa3.31□□□□□ -1.88
COPA-203ENST00000481040 OR51D1Q8NGF3 324 aa3.31□□□□□ -1.88
COPA-203ENST00000481040 JOSD2Q8TAC2 188 aa3.31□□□□□ -1.88
COPA-203ENST00000481040 KCTD4Q8WVF5 259 aa3.31□□□□□ -1.88
COPA-203ENST00000481040 SDHCQ99643 169 aaPredicted RBP3.31□□□□□ -1.88
COPA-203ENST00000481040 TSSK6Q9BXA6 273 aa3.31□□□□□ -1.88
COPA-203ENST00000481040 ALX4Q9H161 411 aaPredicted RBP3.31□□□□□ -1.88
COPA-203ENST00000481040 C11orf49Q9H6J7 331 aa3.31□□□□□ -1.88
COPA-203ENST00000481040 NAV1Q8NEY1 1877 aa3.3□□□□□ -1.88
COPA-203ENST00000481040 TTC21AQ8NDW8 1320 aa3.3□□□□□ -1.88
COPA-203ENST00000481040 TRAV8-1A0A0A6YYK1 113 aa3.3□□□□□ -1.88
COPA-203ENST00000481040 IGHV3-21A0A0B4J1V1 117 aa3.3□□□□□ -1.88
COPA-203ENST00000481040 SMIM9A6NGZ8 99 aa3.3□□□□□ -1.88
COPA-203ENST00000481040 OR5H14A6NHG9 310 aa3.3□□□□□ -1.88
COPA-203ENST00000481040 ZNF850A8MQ14 1090 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms