RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 YAE1D1Q9NRH1 226 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 PLEKHJ1Q9NW61 149 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 TAS2R3Q9NYW6 316 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 OPN4Q9UHM6 478 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 MRPS7Q9Y2R9 242 aaKnown RBP6.83□□□□□ -1.32
USP54-212ENST00000480210 LINC00312Q9Y6C7 94 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 HIVEP2P31629 2446 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 TEX15Q9BXT5 2789 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 TRGV10A0A0A0MS01 117 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 TRAV24A0A0B4J272 114 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 A0A1W2PP11 408 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 SULT1A3P0DMM9 295 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 SULT1A4P0DMN0 295 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 ZNF16P17020 682 aaPredicted RBP6.82□□□□□ -1.32
USP54-212ENST00000480210 PAX6P26367 422 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 BLVRBP30043 206 aaPredicted RBP6.82□□□□□ -1.32
USP54-212ENST00000480210 OR3A1P47881 315 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 SNU13P55769 128 aaKnown RBP6.82□□□□□ -1.32
USP54-212ENST00000480210 EDDM3BP56851 147 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 HOXA4Q00056 320 aaPredicted RBP6.82□□□□□ -1.32
USP54-212ENST00000480210 UNC119Q13432 240 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 IL18Q14116 193 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 GUCA2BQ16661 112 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 CR1LQ2VPA4 569 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 TMEM30BQ3MIR4 351 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 KRBOX4Q5JUW0 171 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 ZNF57Q68EA5 555 aaPredicted RBP6.82□□□□□ -1.32
USP54-212ENST00000480210 OR52W1Q6IF63 320 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 FAHD2BQ6P2I3 314 aaPredicted RBP6.82□□□□□ -1.32
USP54-212ENST00000480210 NR2C2APQ86WQ0 139 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 LAX1Q8IWV1 398 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 BVESQ8NE79 360 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 OR4S1Q8NGB4 309 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 OR10A7Q8NGE5 316 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 NANPQ8TBE9 248 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 FAHD2AQ96GK7 314 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 GHITMQ9H3K2 345 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 GAL3ST2Q9H3Q3 398 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 C7orf69Q9H7B7 122 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 UNKLQ9H9P5 680 aaKnown RBP6.82□□□□□ -1.32
USP54-212ENST00000480210 IL36RNQ9UBH0 155 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 EXTL2Q9UBQ6 330 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 METRNQ9UJH8 293 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 CDC42EP3Q9UKI2 254 aa6.82□□□□□ -1.32
USP54-212ENST00000480210 MAP1AP78559 2803 aaPredicted RBP6.81□□□□□ -1.32
USP54-212ENST00000480210 TRBV6-6A0A0A6YYG2 114 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 A0A0B4J203 849 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 TMEM30CPA0ZSE6 113 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 RAB19A4D1S5 217 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 ZNF729A6NN14 1252 aaPredicted RBP6.81□□□□□ -1.32
USP54-212ENST00000480210 SERPINE3A8MV23 424 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 C22orf46C9J442 243 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 L7N2F9 121 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 GIPP09681 153 aaPredicted RBP6.81□□□□□ -1.32
USP54-212ENST00000480210 CLEC2LP0C7M8 214 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 CHATP28329 748 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 RBMXP38159 391 aaKnown RBP6.81□□□□□ -1.32
USP54-212ENST00000480210 CEBPDP49716 269 aaPredicted RBP6.81□□□□□ -1.32
USP54-212ENST00000480210 CLDN12P56749 244 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 RAB5BP61020 215 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 GUCA2AQ02747 115 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 KRTAP1-1Q07627 177 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 HNRNPA0Q13151 305 aaKnown RBP6.81□□□□□ -1.32
USP54-212ENST00000480210 OPCMLQ14982 345 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 TUSC1Q2TAM9 212 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 PLA1AQ53H76 456 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 IGSF11Q5DX21 431 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 DNLZQ5SXM8 178 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 NCR3LG1Q68D85 454 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 OR10K2Q6IF99 312 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 DUX4L9Q6RFH8 374 aaPredicted RBP6.81□□□□□ -1.32
USP54-212ENST00000480210 FAM185AQ8N0U4 392 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 GAPTQ8N292 157 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 C12orf45Q8N5I9 185 aaPredicted RBP6.81□□□□□ -1.32
USP54-212ENST00000480210 OR10R2Q8NGX6 335 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 RNASE11Q8TAA1 199 aaKnown RBP6.81□□□□□ -1.32
USP54-212ENST00000480210 NEK7Q8TDX7 302 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 UPRTQ96BW1 309 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 PHYHIPLQ96FC7 376 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 S100A16Q96FQ6 103 aaKnown RBP6.81□□□□□ -1.32
USP54-212ENST00000480210 ZNF714Q96N38 554 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 NKX3-1Q99801 234 aaPredicted RBP6.81□□□□□ -1.32
USP54-212ENST00000480210 ATG5Q9H1Y0 275 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 ABCG5Q9H222 651 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 OR51M1Q9H341 326 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 SAV1Q9H4B6 383 aaPredicted RBP6.81□□□□□ -1.32
USP54-212ENST00000480210 METTL8Q9H825 291 aaKnown RBP6.81□□□□□ -1.32
USP54-212ENST00000480210 LPAR2Q9HBW0 351 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.81□□□□□ -1.32
USP54-212ENST00000480210 MMP26Q9NRE1 261 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 COA4Q9NYJ1 87 aa6.81□□□□□ -1.32
USP54-212ENST00000480210 NAV3Q8IVL0 2385 aa6.8□□□□□ -1.32
USP54-212ENST00000480210 A0A0B4J293 547 aa6.8□□□□□ -1.32
USP54-212ENST00000480210 ODAMA1E959 279 aa6.8□□□□□ -1.32
USP54-212ENST00000480210 FOXI3A8MTJ6 420 aaPredicted RBP6.8□□□□□ -1.32
USP54-212ENST00000480210 C17orf98A8MV24 154 aa6.8□□□□□ -1.32
USP54-212ENST00000480210 SNRPGP15A8MWD9 76 aa6.8□□□□□ -1.32
USP54-212ENST00000480210 HAX1O00165 279 aa6.8□□□□□ -1.32
USP54-212ENST00000480210 RAB27BO00194 218 aa6.8□□□□□ -1.32
USP54-212ENST00000480210 CTDSPLO15194 276 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms