RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 SHISA3A0PJX4 238 aa7.35□□□□□ -1.23
GPNMB-211ENST00000479625 TMEM30CPA0ZSE6 113 aa7.35□□□□□ -1.23
GPNMB-211ENST00000479625 GABRPO00591 440 aa7.35□□□□□ -1.23
GPNMB-211ENST00000479625 MT-ND2P03891 347 aa7.35□□□□□ -1.23
GPNMB-211ENST00000479625 DBTP11182 482 aaKnown RBP7.35□□□□□ -1.23
GPNMB-211ENST00000479625 EPHA2P29317 976 aa7.35□□□□□ -1.23
GPNMB-211ENST00000479625 CD81P60033 236 aa7.35□□□□□ -1.23
GPNMB-211ENST00000479625 EWSR1Q01844 656 aaKnown RBP eCLIP7.35□□□□□ -1.23
GPNMB-211ENST00000479625 ZNF85Q03923 595 aa7.35□□□□□ -1.23
GPNMB-211ENST00000479625 IL13RA2Q14627 380 aa7.35□□□□□ -1.23
GPNMB-211ENST00000479625 KISS1Q15726 138 aa7.35□□□□□ -1.23
GPNMB-211ENST00000479625 CT45A1Q5HYN5 189 aa7.35□□□□□ -1.23
GPNMB-211ENST00000479625 TMEM244Q5VVB8 128 aa7.35□□□□□ -1.23
GPNMB-211ENST00000479625 IL34Q6ZMJ4 242 aa7.35□□□□□ -1.23
GPNMB-211ENST00000479625 FAM220AQ7Z4H9 259 aa7.35□□□□□ -1.23
GPNMB-211ENST00000479625 ADGRG5Q8IZF4 528 aa7.35□□□□□ -1.23
GPNMB-211ENST00000479625 PRR18Q8N4B5 295 aa7.35□□□□□ -1.23
GPNMB-211ENST00000479625 OR2G2Q8NGZ5 317 aa7.35□□□□□ -1.23
GPNMB-211ENST00000479625 CT45A3Q8NHU0 189 aa7.35□□□□□ -1.23
GPNMB-211ENST00000479625 TMEM163Q8TC26 289 aa7.35□□□□□ -1.23
GPNMB-211ENST00000479625 ABHD5Q8WTS1 349 aa7.35□□□□□ -1.23
GPNMB-211ENST00000479625 ZNF251Q9BRH9 671 aa7.35□□□□□ -1.23
GPNMB-211ENST00000479625 MRPL20Q9BYC9 149 aaKnown RBP7.35□□□□□ -1.23
GPNMB-211ENST00000479625 H2AFY2Q9P0M6 372 aaPredicted RBP7.35□□□□□ -1.23
GPNMB-211ENST00000479625 GAB2Q9UQC2 676 aa7.35□□□□□ -1.23
GPNMB-211ENST00000479625 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.35□□□□□ -1.23
GPNMB-211ENST00000479625 H0Y980 276 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 SULT1C4O75897 302 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 ISG15P05161 165 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 OR2T7P0C7T2 308 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 EGR2P11161 476 aaPredicted RBP7.34□□□□□ -1.23
GPNMB-211ENST00000479625 ANXA8P13928 327 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 KCNJ3P48549 501 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 CRIP2P52943 208 aaPredicted RBP7.34□□□□□ -1.23
GPNMB-211ENST00000479625 SYNJ2BPP57105 145 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 EFNB1P98172 346 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 DEFA5Q01523 94 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 RAB40BQ12829 278 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 GNMTQ14749 295 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 SPATS1Q496A3 300 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 ZNF691Q5VV52 312 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 ELP2Q6IA86 826 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 LCN12Q6JVE5 192 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 LIN54Q6MZP7 749 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 FAHD1Q6P587 224 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 DEFB125Q8N687 156 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 OR9G4Q8NGQ1 327 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 TMEM106AQ96A25 262 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 CCDC124Q96CT7 223 aaKnown RBP7.34□□□□□ -1.23
GPNMB-211ENST00000479625 CYYR1Q96J86 154 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 RHOVQ96L33 236 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 FAM192AQ9GZU8 254 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 CST11Q9H112 138 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 FBXL15Q9H469 300 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 FAM53CQ9NYF3 392 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 GNG12Q9UBI6 72 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 TAGLN3Q9UI15 199 aa7.34□□□□□ -1.23
GPNMB-211ENST00000479625 ANKRD34BA5PLL1 514 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 NUPR2A6NF83 97 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 FCN1O00602 326 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 LANCL1O43813 399 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 MITFO75030 526 aaPredicted RBP7.33□□□□□ -1.24
GPNMB-211ENST00000479625 OR7C1O76099 320 aaPredicted RBP7.33□□□□□ -1.24
GPNMB-211ENST00000479625 NDUFA3O95167 84 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 HTR3BO95264 441 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 TRGV3P03979 118 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 CSTBP04080 98 aaKnown RBP7.33□□□□□ -1.24
GPNMB-211ENST00000479625 CD7P09564 240 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 GZMHP20718 246 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 DAPP51397 102 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 CX3CL1P78423 397 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 DYRK1AQ13627 763 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 TRIM25Q14258 630 aaKnown RBP7.33□□□□□ -1.24
GPNMB-211ENST00000479625 ACTBL2Q562R1 376 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 C12orf73Q69YU5 71 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 UNQ5815/PRO19632Q6UWF5 114 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 C5orf24Q7Z6I8 188 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 GID4Q8IVV7 300 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 ODF3L1Q8IXM7 274 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 Q8N402 240 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 OR1L1Q8NH94 360 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 TNFAIP8L1Q8WVP5 186 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 CANT1Q8WVQ1 401 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 NEURL2Q9BR09 285 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 PRRG3Q9BZD7 231 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 FAM107BQ9H098 131 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 SRD5A3Q9H8P0 318 aa7.33□□□□□ -1.24
GPNMB-211ENST00000479625 CNOT2Q9NZN8 540 aaKnown RBP7.33□□□□□ -1.24
GPNMB-211ENST00000479625 AIPO00170 330 aa7.32□□□□□ -1.24
GPNMB-211ENST00000479625 GEMIN2O14893 280 aaKnown RBP7.32□□□□□ -1.24
GPNMB-211ENST00000479625 SULT1B1O43704 296 aa7.32□□□□□ -1.24
GPNMB-211ENST00000479625 ORC5O43913 435 aa7.32□□□□□ -1.24
GPNMB-211ENST00000479625 TPPPO94811 219 aa7.32□□□□□ -1.24
GPNMB-211ENST00000479625 CDRT1O95170 752 aa7.32□□□□□ -1.24
GPNMB-211ENST00000479625 TRBV12-3P01733 135 aa7.32□□□□□ -1.24
GPNMB-211ENST00000479625 CSN3P07498 182 aa7.32□□□□□ -1.24
GPNMB-211ENST00000479625 RBM11P57052 281 aaKnown RBP7.32□□□□□ -1.24
GPNMB-211ENST00000479625 ADARB1P78563 741 aaKnown RBP7.32□□□□□ -1.24
GPNMB-211ENST00000479625 KLF5Q13887 457 aaPredicted RBP7.32□□□□□ -1.24
GPNMB-211ENST00000479625 RSU1Q15404 277 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms