RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 GABARAPL2P60520 117 aa1.96□□□□□ -2.1
CCDC58-204ENST00000479414 PAFAH1B3Q15102 231 aaKnown RBP1.96□□□□□ -2.1
CCDC58-204ENST00000479414 TMEM249Q2WGJ8 235 aa1.96□□□□□ -2.1
CCDC58-204ENST00000479414 KRTAP13-4Q3LI77 160 aa1.96□□□□□ -2.1
CCDC58-204ENST00000479414 DTD1Q8TEA8 209 aa1.96□□□□□ -2.1
CCDC58-204ENST00000479414 GALMQ96C23 342 aa1.96□□□□□ -2.1
CCDC58-204ENST00000479414 HBEGFQ99075 208 aa1.96□□□□□ -2.1
CCDC58-204ENST00000479414 BCL2L14Q9BZR8 327 aa1.96□□□□□ -2.1
CCDC58-204ENST00000479414 CHST5Q9GZS9 411 aa1.96□□□□□ -2.1
CCDC58-204ENST00000479414 MS4A12Q9NXJ0 267 aa1.96□□□□□ -2.1
CCDC58-204ENST00000479414 HEY1Q9Y5J3 304 aa1.96□□□□□ -2.1
CCDC58-204ENST00000479414 KIAA0232Q92628 1395 aa1.96□□□□□ -2.1
CCDC58-204ENST00000479414 PLXNA3P51805 1871 aa1.95□□□□□ -2.1
CCDC58-204ENST00000479414 C19orf71A6NCJ1 209 aa1.95□□□□□ -2.1
CCDC58-204ENST00000479414 NDUFS6O75380 124 aaKnown RBP1.95□□□□□ -2.1
CCDC58-204ENST00000479414 RAB36O95755 333 aa1.95□□□□□ -2.1
CCDC58-204ENST00000479414 CD99P14209 185 aa1.95□□□□□ -2.1
CCDC58-204ENST00000479414 FAM3AP98173 230 aa1.95□□□□□ -2.1
CCDC58-204ENST00000479414 XRCC4Q13426 336 aa1.95□□□□□ -2.1
CCDC58-204ENST00000479414 SS18Q15532 418 aa1.95□□□□□ -2.1
CCDC58-204ENST00000479414 MTERF4Q7Z6M4 381 aaKnown RBP1.95□□□□□ -2.1
CCDC58-204ENST00000479414 TMEM75Q8N9X5 138 aa1.95□□□□□ -2.1
CCDC58-204ENST00000479414 OR4P4Q8NGL7 312 aa1.95□□□□□ -2.1
CCDC58-204ENST00000479414 OR4K13Q8NH42 304 aa1.95□□□□□ -2.1
CCDC58-204ENST00000479414 CAPZA3Q96KX2 299 aa1.95□□□□□ -2.1
CCDC58-204ENST00000479414 GTSF1LQ9H1H1 148 aa1.95□□□□□ -2.1
CCDC58-204ENST00000479414 NRBP2Q9NSY0 501 aa1.95□□□□□ -2.1
CCDC58-204ENST00000479414 SCML1Q9UN30 329 aa1.95□□□□□ -2.1
CCDC58-204ENST00000479414 CHD2O14647 1828 aaKnown RBP1.94□□□□□ -2.1
CCDC58-204ENST00000479414 SMLR1H3BR10 107 aa1.94□□□□□ -2.1
CCDC58-204ENST00000479414 YKT6O15498 198 aa1.94□□□□□ -2.1
CCDC58-204ENST00000479414 DENRO43583 198 aaKnown RBP1.94□□□□□ -2.1
CCDC58-204ENST00000479414 IFI30P13284 250 aa1.94□□□□□ -2.1
CCDC58-204ENST00000479414 CPMP14384 443 aa1.94□□□□□ -2.1
CCDC58-204ENST00000479414 ZNF7P17097 686 aaPredicted RBP1.94□□□□□ -2.1
CCDC58-204ENST00000479414 RCVRNP35243 200 aa1.94□□□□□ -2.1
CCDC58-204ENST00000479414 PPP1CCP36873 323 aaKnown RBP1.94□□□□□ -2.1
CCDC58-204ENST00000479414 GABRA4P48169 554 aa1.94□□□□□ -2.1
CCDC58-204ENST00000479414 TRMT12Q53H54 448 aaKnown RBP1.94□□□□□ -2.1
CCDC58-204ENST00000479414 TIMM23BQ5SRD1 257 aa1.94□□□□□ -2.1
CCDC58-204ENST00000479414 DYNC2LI1Q8TCX1 351 aa1.94□□□□□ -2.1
CCDC58-204ENST00000479414 GPR119Q8TDV5 335 aa1.94□□□□□ -2.1
CCDC58-204ENST00000479414 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.94□□□□□ -2.1
CCDC58-204ENST00000479414 GTF2H4Q92759 462 aa1.94□□□□□ -2.1
CCDC58-204ENST00000479414 EBNA1BP2Q99848 306 aaKnown RBP1.94□□□□□ -2.1
CCDC58-204ENST00000479414 ACBD6Q9BR61 282 aa1.94□□□□□ -2.1
CCDC58-204ENST00000479414 C1QTNF6Q9BXI9 259 aa1.94□□□□□ -2.1
CCDC58-204ENST00000479414 GBF1Q92538 1859 aa1.93□□□□□ -2.1
CCDC58-204ENST00000479414 A0A0J9YX75 114 aa1.93□□□□□ -2.1
CCDC58-204ENST00000479414 ADAP1O75689 374 aa1.93□□□□□ -2.1
CCDC58-204ENST00000479414 ORM2P19652 201 aa1.93□□□□□ -2.1
CCDC58-204ENST00000479414 GADD45AP24522 165 aa1.93□□□□□ -2.1
CCDC58-204ENST00000479414 TMEM176BQ3YBM2 270 aaPredicted RBP1.93□□□□□ -2.1
CCDC58-204ENST00000479414 RBM48Q5RL73 367 aaKnown RBP1.93□□□□□ -2.1
CCDC58-204ENST00000479414 ZBTB8OSQ8IWT0 167 aa1.93□□□□□ -2.1
CCDC58-204ENST00000479414 BOD1L2Q8IYS8 172 aa1.93□□□□□ -2.1
CCDC58-204ENST00000479414 UPK3BQ9BT76 320 aa1.93□□□□□ -2.1
CCDC58-204ENST00000479414 TTTY12Q9BZ98 90 aa1.93□□□□□ -2.1
CCDC58-204ENST00000479414 TMEM106BQ9NUM4 274 aa1.93□□□□□ -2.1
CCDC58-204ENST00000479414 MRPS16Q9Y3D3 137 aaKnown RBP1.93□□□□□ -2.1
CCDC58-204ENST00000479414 MKRN2OSH3BPM6 223 aa1.92□□□□□ -2.1
CCDC58-204ENST00000479414 IGKV1-16P04430 117 aa1.92□□□□□ -2.1
CCDC58-204ENST00000479414 ADORA1P30542 326 aa1.92□□□□□ -2.1
CCDC58-204ENST00000479414 SPAM1P38567 509 aa1.92□□□□□ -2.1
CCDC58-204ENST00000479414 PSMB3P49720 205 aa1.92□□□□□ -2.1
CCDC58-204ENST00000479414 LINC00313P59037 77 aa1.92□□□□□ -2.1
CCDC58-204ENST00000479414 ACTBP60709 375 aa1.92□□□□□ -2.1
CCDC58-204ENST00000479414 RAB8AP61006 207 aa1.92□□□□□ -2.1
CCDC58-204ENST00000479414 ACTG1P63261 375 aa1.92□□□□□ -2.1
CCDC58-204ENST00000479414 SYCP1Q15431 976 aa1.92□□□□□ -2.1
CCDC58-204ENST00000479414 C17orf78Q8N4C9 275 aa1.92□□□□□ -2.1
CCDC58-204ENST00000479414 OR4C16Q8NGL9 310 aa1.92□□□□□ -2.1
CCDC58-204ENST00000479414 RNASE11Q8TAA1 199 aaKnown RBP1.92□□□□□ -2.1
CCDC58-204ENST00000479414 ZNF251Q9BRH9 671 aa1.92□□□□□ -2.1
CCDC58-204ENST00000479414 ASCL3Q9NQ33 180 aa1.92□□□□□ -2.1
CCDC58-204ENST00000479414 KNCNA6PVL3 124 aa1.91□□□□□ -2.1
CCDC58-204ENST00000479414 FBP1P09467 338 aa1.91□□□□□ -2.1
CCDC58-204ENST00000479414 OR4A8P0C604 315 aa1.91□□□□□ -2.1
CCDC58-204ENST00000479414 IGHV3-30-3P0DP02 117 aa1.91□□□□□ -2.1
CCDC58-204ENST00000479414 KDELR2P33947 212 aa1.91□□□□□ -2.1
CCDC58-204ENST00000479414 ZNF117Q03924 483 aa1.91□□□□□ -2.1
CCDC58-204ENST00000479414 SLAMF1Q13291 335 aa1.91□□□□□ -2.1
CCDC58-204ENST00000479414 MAPK14Q16539 360 aa1.91□□□□□ -2.1
CCDC58-204ENST00000479414 MRPL51Q4U2R6 128 aaKnown RBP1.91□□□□□ -2.1
CCDC58-204ENST00000479414 BLIDQ8IZY5 108 aa1.91□□□□□ -2.1
CCDC58-204ENST00000479414 TAMM41Q96BW9 452 aa1.91□□□□□ -2.1
CCDC58-204ENST00000479414 FAM206AQ9NX38 181 aa1.91□□□□□ -2.1
CCDC58-204ENST00000479414 COMMD9Q9P000 198 aa1.91□□□□□ -2.1
CCDC58-204ENST00000479414 COL4A2P08572 1712 aa1.91□□□□□ -2.1
CCDC58-204ENST00000479414 SLIT2O94813 1529 aa1.91□□□□□ -2.1
CCDC58-204ENST00000479414 PLCH2O75038 1416 aa1.91□□□□□ -2.1
CCDC58-204ENST00000479414 CLUHO75153 1309 aa1.91□□□□□ -2.1
CCDC58-204ENST00000479414 USP42Q9H9J4 1324 aaKnown RBP1.91□□□□□ -2.1
CCDC58-204ENST00000479414 PRRC2BQ5JSZ5 2229 aaKnown RBP1.9□□□□□ -2.1
CCDC58-204ENST00000479414 FAM25EA8MYX2 175 aa1.9□□□□□ -2.11
CCDC58-204ENST00000479414 C9J4A7 227 aa1.9□□□□□ -2.11
CCDC58-204ENST00000479414 H3BSA7 217 aa1.9□□□□□ -2.11
CCDC58-204ENST00000479414 SYNGR1O43759 233 aa1.9□□□□□ -2.11
CCDC58-204ENST00000479414 DLX6P56179 175 aa1.9□□□□□ -2.11
CCDC58-204ENST00000479414 GTF2BQ00403 316 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms