RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 EIF3GO75821 320 aaKnown RBP eCLIP6.51□□□□□ -1.37
DDX39B-218ENST00000478365 VENTXO95231 258 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 OR2H2O95918 312 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 SFTPBP07988 381 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 GTF2F2P13984 249 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 RAB3BP20337 219 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 RPS19P39019 145 aaKnown RBP6.51□□□□□ -1.37
DDX39B-218ENST00000478365 NPBWR2P48146 333 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 RFX2P48378 723 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 LGALS4P56470 323 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 RPS11P62280 158 aaKnown RBP eCLIP6.51□□□□□ -1.37
DDX39B-218ENST00000478365 FOXL1Q12952 345 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 TPBGQ13641 420 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 EXOSC2Q13868 293 aaKnown RBP6.51□□□□□ -1.37
DDX39B-218ENST00000478365 GLT8D1Q68CQ7 371 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 TMEM200BQ69YZ2 307 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 REC114Q7Z4M0 266 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 TMEM17Q86X19 198 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 SPAG16Q8N0X2 631 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 OSR2Q8N2R0 312 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 JAGN1Q8N5M9 183 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 Q8N7P7 452 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 DMBX1Q8NFW5 382 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 OR52N4Q8NGI2 321 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 TCTEX1D2Q8WW35 142 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 GCDHQ92947 438 aaPredicted RBP6.51□□□□□ -1.37
DDX39B-218ENST00000478365 TNFRSF14Q92956 283 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 LINC00052Q96N35 136 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 SPACA5Q96QH8 159 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 OR14A2Q96R54 314 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 BARHL1Q9BZE3 327 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 CST11Q9H112 138 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 SIRT7Q9NRC8 400 aa6.51□□□□□ -1.37
DDX39B-218ENST00000478365 LSM2Q9Y333 95 aaKnown RBP6.51□□□□□ -1.37
DDX39B-218ENST00000478365 TBL2Q9Y4P3 447 aaKnown RBP6.51□□□□□ -1.37
DDX39B-218ENST00000478365 SIRT4Q9Y6E7 314 aaPredicted RBP6.51□□□□□ -1.37
DDX39B-218ENST00000478365 SVEP1Q4LDE5 3571 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 IGKV1-12A0A0C4DH73 117 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 F8VVB4 439 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 F8VWA3 439 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 RNASEK-C17orf49H0YIS7 233 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 SIRPB1O00241 398 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 CA11O75493 328 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 IGKV1D-12P01611 117 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 CRYBA1P05813 215 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 FGF2P09038 288 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 CPEP16870 476 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 PVALBP20472 110 aaPredicted RBP6.5□□□□□ -1.37
DDX39B-218ENST00000478365 GALP22466 123 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 PSMB9P28065 219 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 GABRA5P31644 462 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 OR3A1P47881 315 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 CEBPDP49716 269 aaPredicted RBP6.5□□□□□ -1.37
DDX39B-218ENST00000478365 COMPP49747 757 aaPredicted RBP6.5□□□□□ -1.37
DDX39B-218ENST00000478365 RBM11P57052 281 aaKnown RBP6.5□□□□□ -1.37
DDX39B-218ENST00000478365 NCS1P62166 190 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 EMX1Q04741 257 aaPredicted RBP6.5□□□□□ -1.37
DDX39B-218ENST00000478365 RBM39Q14498 530 aaKnown RBP6.5□□□□□ -1.37
DDX39B-218ENST00000478365 EDDM3AQ14507 147 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 FAM189A2Q15884 450 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 GUCA2BQ16661 112 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 DEFB112Q30KQ8 113 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 TMEM30BQ3MIR4 351 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 ACSM3Q53FZ2 586 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 OR2B11Q5JQS5 317 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 MINOS1Q5TGZ0 78 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 UNQ9370/PRO34162Q6UXP9 181 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 BRD3OSQ6XYD6 125 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 Q6YL49 198 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 GDPGP1Q6ZNW5 385 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 LIAT1Q6ZQX7 453 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 C17orf107Q6ZR85 190 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 TRAPPC6BQ86SZ2 158 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 RTN4RL2Q86UN3 420 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 ZFP41Q8N8Y5 198 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 ZDHHC22Q8N966 263 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 DUSP18Q8NEJ0 188 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 OR13C5Q8NGS8 318 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 GLYATL2Q8WU03 294 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 C22orf15Q8WYQ4 148 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 CORO2AQ92828 525 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 MDFIQ99750 246 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 NKX6-2Q9C056 277 aaPredicted RBP6.5□□□□□ -1.37
DDX39B-218ENST00000478365 RAB18Q9NP72 206 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 ACOT13Q9NPJ3 140 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 MRPS28Q9Y2Q9 187 aaKnown RBP6.5□□□□□ -1.37
DDX39B-218ENST00000478365 ALG5Q9Y673 324 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 MINOS1-NBL1R4GNA1 71 aa6.5□□□□□ -1.37
DDX39B-218ENST00000478365 TRAV8-7A0A075B6U6 113 aa6.49□□□□□ -1.37
DDX39B-218ENST00000478365 IGHV3OR16-10A0A075B7F0 116 aa6.49□□□□□ -1.37
DDX39B-218ENST00000478365 A0A0G2JK05 382 aa6.49□□□□□ -1.37
DDX39B-218ENST00000478365 ODAMA1E959 279 aa6.49□□□□□ -1.37
DDX39B-218ENST00000478365 TMEM89A2RUT3 159 aa6.49□□□□□ -1.37
DDX39B-218ENST00000478365 MARCH11A6NNE9 402 aa6.49□□□□□ -1.37
DDX39B-218ENST00000478365 TEX46H3BTG2 121 aa6.49□□□□□ -1.37
DDX39B-218ENST00000478365 SLC33A1O00400 549 aaPredicted RBP6.49□□□□□ -1.37
DDX39B-218ENST00000478365 UBE2CO00762 179 aa6.49□□□□□ -1.37
DDX39B-218ENST00000478365 PSPNO60542 156 aa6.49□□□□□ -1.37
DDX39B-218ENST00000478365 SC5DO75845 299 aa6.49□□□□□ -1.37
DDX39B-218ENST00000478365 RGS9O75916 674 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms