RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 MFNGO00587 321 aa8.29□□□□□ -1.08
HDAC6-222ENST00000478095 SLC31A2O15432 143 aa8.29□□□□□ -1.08
HDAC6-222ENST00000478095 GABARAPO95166 117 aa8.29□□□□□ -1.08
HDAC6-222ENST00000478095 HIST1H1DP16402 221 aaKnown RBP8.29□□□□□ -1.08
HDAC6-222ENST00000478095 CD33P20138 364 aa8.29□□□□□ -1.08
HDAC6-222ENST00000478095 PRRX1P54821 245 aa8.29□□□□□ -1.08
HDAC6-222ENST00000478095 LOXL3P58215 753 aa8.29□□□□□ -1.08
HDAC6-222ENST00000478095 HMGN3Q15651 99 aa8.29□□□□□ -1.08
HDAC6-222ENST00000478095 ANKRD13BQ86YJ7 626 aa8.29□□□□□ -1.08
HDAC6-222ENST00000478095 IL1F10Q8WWZ1 152 aa8.29□□□□□ -1.08
HDAC6-222ENST00000478095 EDARADDQ8WWZ3 215 aa8.29□□□□□ -1.08
HDAC6-222ENST00000478095 PTX4Q96A99 478 aa8.29□□□□□ -1.08
HDAC6-222ENST00000478095 SLC25A38Q96DW6 304 aa8.29□□□□□ -1.08
HDAC6-222ENST00000478095 OR2S2Q9NQN1 319 aa8.29□□□□□ -1.08
HDAC6-222ENST00000478095 RHBDL2Q9NX52 303 aa8.29□□□□□ -1.08
HDAC6-222ENST00000478095 DPM3Q9P2X0 92 aa8.29□□□□□ -1.08
HDAC6-222ENST00000478095 VPREB3Q9UKI3 123 aa8.29□□□□□ -1.08
HDAC6-222ENST00000478095 ELF5Q9UKW6 265 aaPredicted RBP8.29□□□□□ -1.08
HDAC6-222ENST00000478095 LEUTXA8MZ59 168 aa8.28□□□□□ -1.08
HDAC6-222ENST00000478095 CRYBA1P05813 215 aa8.28□□□□□ -1.08
HDAC6-222ENST00000478095 CD3GP09693 182 aa8.28□□□□□ -1.08
HDAC6-222ENST00000478095 CD24P25063 80 aa8.28□□□□□ -1.08
HDAC6-222ENST00000478095 PPP1CCP36873 323 aaKnown RBP8.28□□□□□ -1.08
HDAC6-222ENST00000478095 MRPS15P82914 257 aaKnown RBP8.28□□□□□ -1.08
HDAC6-222ENST00000478095 DIAPH2-AS1Q14236 149 aa8.28□□□□□ -1.08
HDAC6-222ENST00000478095 CTF1Q16619 201 aa8.28□□□□□ -1.08
HDAC6-222ENST00000478095 TPTE2P1Q5T6R2 138 aa8.28□□□□□ -1.08
HDAC6-222ENST00000478095 ZNF880Q6PDB4 577 aa8.28□□□□□ -1.08
HDAC6-222ENST00000478095 MOB1BQ7L9L4 216 aa8.28□□□□□ -1.08
HDAC6-222ENST00000478095 TMEM219Q86XT9 240 aa8.28□□□□□ -1.08
HDAC6-222ENST00000478095 IZUMO1Q8IYV9 350 aa8.28□□□□□ -1.08
HDAC6-222ENST00000478095 OR52M1Q8NGK5 317 aa8.28□□□□□ -1.08
HDAC6-222ENST00000478095 OR10X1Q8NGY0 326 aa8.28□□□□□ -1.08
HDAC6-222ENST00000478095 OR5R1Q8NH85 324 aa8.28□□□□□ -1.08
HDAC6-222ENST00000478095 PIFOQ8TCI5 191 aa8.28□□□□□ -1.08
HDAC6-222ENST00000478095 MAFIPQ8WZ33 124 aa8.28□□□□□ -1.08
HDAC6-222ENST00000478095 TOMM40LQ969M1 308 aa8.28□□□□□ -1.08
HDAC6-222ENST00000478095 RPEQ96AT9 228 aa8.28□□□□□ -1.08
HDAC6-222ENST00000478095 GALMQ96C23 342 aa8.28□□□□□ -1.08
HDAC6-222ENST00000478095 Q9N2K0 584 aa8.28□□□□□ -1.08
HDAC6-222ENST00000478095 RAB9BQ9NP90 201 aa8.28□□□□□ -1.08
HDAC6-222ENST00000478095 ABCB10Q9NRK6 738 aa8.28□□□□□ -1.08
HDAC6-222ENST00000478095 ABRACLQ9P1F3 81 aa8.28□□□□□ -1.08
HDAC6-222ENST00000478095 TRBV6-6A0A0A6YYG2 114 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 VGLL3A8MV65 326 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 LY6LH3BQJ8 138 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 FCGR3AP08637 254 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 SCTP09683 121 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 HKR1P10072 659 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 CEACAM3P40198 252 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 REG1BP48304 166 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 ZNF134P52741 427 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 HLA-DRB3P79483 266 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 MADCAM1Q13477 382 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 ARFRP1Q13795 201 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 AANATQ16613 207 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 TMEM30BQ3MIR4 351 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 CDNFQ49AH0 187 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 FBLN7Q53RD9 439 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 CT45A1Q5HYN5 189 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 DHRS7BQ6IAN0 325 aaPredicted RBP8.27□□□□□ -1.09
HDAC6-222ENST00000478095 ZNF554Q86TJ5 538 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 CLVS1Q8IUQ0 354 aaPredicted RBP8.27□□□□□ -1.09
HDAC6-222ENST00000478095 DTX3Q8N9I9 347 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 ZNF439Q8NDP4 499 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 CT45A3Q8NHU0 189 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 NUDCD2Q8WVJ2 157 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 SLC25A46Q96AG3 418 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 RIMS4Q9H426 269 aaPredicted RBP8.27□□□□□ -1.09
HDAC6-222ENST00000478095 C1RLQ9NZP8 487 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 ZNF230Q9UIE0 474 aaPredicted RBP8.27□□□□□ -1.09
HDAC6-222ENST00000478095 JPT1Q9UK76 154 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 AMMECR1Q9Y4X0 333 aaPredicted RBP8.27□□□□□ -1.09
HDAC6-222ENST00000478095 ETV7Q9Y603 341 aa8.27□□□□□ -1.09
HDAC6-222ENST00000478095 TMEM89A2RUT3 159 aa8.26□□□□□ -1.09
HDAC6-222ENST00000478095 TMEM235A6NFC5 223 aa8.26□□□□□ -1.09
HDAC6-222ENST00000478095 SERPINE3A8MV23 424 aa8.26□□□□□ -1.09
HDAC6-222ENST00000478095 HSD17B6O14756 317 aa8.26□□□□□ -1.09
HDAC6-222ENST00000478095 CHST1O43916 411 aa8.26□□□□□ -1.09
HDAC6-222ENST00000478095 MDKP21741 143 aaPredicted RBP8.26□□□□□ -1.09
HDAC6-222ENST00000478095 RAG2P55895 527 aa8.26□□□□□ -1.09
HDAC6-222ENST00000478095 SCAND1P57086 179 aa8.26□□□□□ -1.09
HDAC6-222ENST00000478095 MORN2Q502X0 79 aa8.26□□□□□ -1.09
HDAC6-222ENST00000478095 CCBE1Q6UXH8 406 aaPredicted RBP8.26□□□□□ -1.09
HDAC6-222ENST00000478095 C12orf54Q6X4T0 127 aa8.26□□□□□ -1.09
HDAC6-222ENST00000478095 SLC25A48Q6ZT89 311 aaKnown RBP8.26□□□□□ -1.09
HDAC6-222ENST00000478095 CROCCP3Q8IVE0 287 aa8.26□□□□□ -1.09
HDAC6-222ENST00000478095 SAMD12Q8N8I0 201 aa8.26□□□□□ -1.09
HDAC6-222ENST00000478095 CREB3L1Q96BA8 519 aa8.26□□□□□ -1.09
HDAC6-222ENST00000478095 PHF21AQ96BD5 680 aa8.26□□□□□ -1.09
HDAC6-222ENST00000478095 PARP12Q9H0J9 701 aaKnown RBP8.26□□□□□ -1.09
HDAC6-222ENST00000478095 DCSTAMPQ9H295 470 aa8.26□□□□□ -1.09
HDAC6-222ENST00000478095 OR1A1Q9P1Q5 309 aa8.26□□□□□ -1.09
HDAC6-222ENST00000478095 SLC23A1Q9UHI7 598 aa8.26□□□□□ -1.09
HDAC6-222ENST00000478095 SPATA2Q9UM82 520 aa8.26□□□□□ -1.09
HDAC6-222ENST00000478095 TCF19Q9Y242 345 aa8.26□□□□□ -1.09
HDAC6-222ENST00000478095 COL6A5A8TX70 2615 aa8.25□□□□□ -1.09
HDAC6-222ENST00000478095 TRAV18A0A075B6X5 111 aa8.25□□□□□ -1.09
HDAC6-222ENST00000478095 IGKV1-6A0A0C4DH72 117 aa8.25□□□□□ -1.09
HDAC6-222ENST00000478095 A0A1W2PPI3 338 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms