RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 OR4D5Q8NGN0 318 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 Q8TCH9 128 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 GLYATL2Q8WU03 294 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 DYRK2Q92630 601 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 GTF3AQ92664 365 aaKnown RBP4.21□□□□□ -1.74
SF3B6-202ENST00000478050 APH1AQ96BI3 265 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 MSI2Q96DH6 328 aaKnown RBP4.21□□□□□ -1.74
SF3B6-202ENST00000478050 HIST1H2AAQ96QV6 131 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 NRIP2Q9BQI9 281 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 GINS3Q9BRX5 216 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 PAPOLGQ9BWT3 736 aaKnown RBP4.21□□□□□ -1.74
SF3B6-202ENST00000478050 TTTY12Q9BZ98 90 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 HRH4Q9H3N8 390 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 RIMS4Q9H426 269 aaPredicted RBP4.21□□□□□ -1.74
SF3B6-202ENST00000478050 CALHM2Q9HA72 323 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 Q9N2K0 584 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 PRELID1Q9Y255 219 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 RCL1Q9Y2P8 373 aaKnown RBP4.21□□□□□ -1.74
SF3B6-202ENST00000478050 KLF13Q9Y2Y9 288 aaPredicted RBP4.21□□□□□ -1.74
SF3B6-202ENST00000478050 STRAPQ9Y3F4 350 aaKnown RBP4.21□□□□□ -1.74
SF3B6-202ENST00000478050 MPC1Q9Y5U8 109 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 MED13Q9UHV7 2174 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 ZNF407Q9C0G0 2248 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 MED13LQ71F56 2210 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 ATMQ13315 3056 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 C3orf85A0A1B0GTC6 90 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 C5orf49A4QMS7 147 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 LRP5LA4QPB2 252 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 ANKRD30BLA7E2S9 258 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 CD300LBA8K4G0 201 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 FAM166BA8MTA8 275 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 ZNF732B4DXR9 585 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 KLRC4-KLRK1H3BQV0 150 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 H7C2Y5 167 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 SIGLEC5O15389 551 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 NME2P1O60361 137 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 LY86O95711 162 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 IL18BPO95998 194 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 NAPSAO96009 420 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 F10P00742 488 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 IGHV3-9P01782 118 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 HLA-HP01893 362 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 CD5P06127 495 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 WNT2P09544 360 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 CCNOP22674 350 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 ITGA3P26006 1051 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 S100GP29377 79 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 APLNRP35414 380 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 HAAOP46952 286 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 NPBWR2P48146 333 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 KCNJ3P48549 501 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 MEOX1P50221 254 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 AKR1C2P52895 323 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 DVL1P1P54792 670 aaPredicted RBP4.2□□□□□ -1.74
SF3B6-202ENST00000478050 UCP2P55851 309 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 GNG3P63215 75 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 NKX6-1P78426 367 aaPredicted RBP4.2□□□□□ -1.74
SF3B6-202ENST00000478050 AKR1C1Q04828 323 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 SRYQ05066 204 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 PEA15Q15121 130 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 SP6Q3SY56 376 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 FAM76BQ5HYJ3 339 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 DCAF10Q5QP82 559 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 ZNF573Q86YE8 665 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 ZNF695Q8IW36 515 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 TUSC5Q8IXB3 177 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 SLC35G3Q8N808 338 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 NAXEQ8NCW5 288 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 LFNGQ8NES3 379 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 DMBX1Q8NFW5 382 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 OR11L1Q8NGX0 322 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 LYPD6BQ8NI32 183 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 HPSE2Q8WWQ2 592 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 IL22RA2Q969J5 263 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 ERGIC1Q969X5 290 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 SLAMF9Q96A28 289 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 MBD6Q96DN6 1003 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 POM121L2Q96KW2 1035 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 FER1L6-AS2Q96M78 137 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 TMEM56Q96MV1 263 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 SIGLEC12Q96PQ1 595 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 SMIM3Q9BZL3 60 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 PKIBQ9C010 78 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 FGF23Q9GZV9 251 aaPredicted RBP4.2□□□□□ -1.74
SF3B6-202ENST00000478050 SLC25A31Q9H0C2 315 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 TMEM222Q9H0R3 208 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 TLNRD1Q9H1K6 362 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 C11orf1Q9H5F2 150 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 TMEM231Q9H6L2 316 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 FOXJ2Q9P0K8 574 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 ZNF581Q9P0T4 197 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 UBE2J1Q9Y385 318 aaPredicted RBP4.2□□□□□ -1.74
SF3B6-202ENST00000478050 PRELID3BQ9Y3B1 194 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 KPTNQ9Y664 436 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 TMEM56-RWDD3S4R434 201 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 ITPR2Q14571 2701 aa4.2□□□□□ -1.74
SF3B6-202ENST00000478050 RP1L1Q8IWN7 2480 aaPredicted RBP4.19□□□□□ -1.74
SF3B6-202ENST00000478050 A0A1B0GW64 132 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 CLEC18AA5D8T8 446 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 NKX2-6A6NCS4 301 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms