RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 CENPVL3A0A0U1RRI6 287 aa12.5□□□□□ -0.41
SEC13-215ENST00000477547 A0A1W2PRD5 423 aa12.5□□□□□ -0.41
SEC13-215ENST00000477547 A0A1W2PRF3 423 aa12.5□□□□□ -0.41
SEC13-215ENST00000477547 A0A1W2PRM7 423 aa12.5□□□□□ -0.41
SEC13-215ENST00000477547 FABP12A6NFH5 140 aa12.5□□□□□ -0.41
SEC13-215ENST00000477547 SCTP09683 121 aa12.5□□□□□ -0.41
SEC13-215ENST00000477547 GNG10P50151 68 aa12.5□□□□□ -0.41
SEC13-215ENST00000477547 MRPS10P82664 201 aaKnown RBP12.5□□□□□ -0.41
SEC13-215ENST00000477547 SRSF7Q16629 238 aaKnown RBP eCLIP12.5□□□□□ -0.41
SEC13-215ENST00000477547 STEAP3Q658P3 488 aa12.5□□□□□ -0.41
SEC13-215ENST00000477547 RUSC1-AS1Q66K80 236 aa12.5□□□□□ -0.41
SEC13-215ENST00000477547 HCP5Q6MZN7 132 aa12.5□□□□□ -0.41
SEC13-215ENST00000477547 BEST4Q8NFU0 473 aa12.5□□□□□ -0.41
SEC13-215ENST00000477547 OR10V1Q8NGI7 309 aa12.5□□□□□ -0.41
SEC13-215ENST00000477547 OR4A4PQ8NGN8 299 aa12.5□□□□□ -0.41
SEC13-215ENST00000477547 LEAP2Q969E1 77 aa12.5□□□□□ -0.41
SEC13-215ENST00000477547 OCSTAMPQ9BR26 566 aa12.5□□□□□ -0.41
SEC13-215ENST00000477547 CABLES2Q9BTV7 478 aa12.5□□□□□ -0.41
SEC13-215ENST00000477547 GFOD1Q9NXC2 390 aa12.5□□□□□ -0.41
SEC13-215ENST00000477547 CDC42EP3Q9UKI2 254 aa12.5□□□□□ -0.41
SEC13-215ENST00000477547 A0A087X0M5 115 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 IGHV1-69DA0A0B4J2H0 117 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 A0A1B0GX30 115 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 SULT1C2O00338 296 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 IGHV1-69P01742 117 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 IGHV3-7P01780 117 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 GSTT2P0CG29 244 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 GSTT2BP0CG30 244 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 CD34P28906 385 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 RCVRNP35243 200 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 LOXL3P58215 753 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 ARPC4P59998 168 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 DGCR2P98153 550 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 HERPUD1Q15011 391 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 UTF1Q5T230 341 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 FAM53AQ6NSI3 398 aaPredicted RBP12.49□□□□□ -0.41
SEC13-215ENST00000477547 BRD3OSQ6XYD6 125 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 HOGA1Q86XE5 327 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 OR52L2PQ8NGH6 319 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 OR52M1Q8NGK5 317 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 OR52I2Q8NH67 350 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 SMIM4Q8WVI0 70 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 TMEM158Q8WZ71 300 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 SNAPC3Q92966 411 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 OR2S2Q9NQN1 319 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 OR1A1Q9P1Q5 309 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 SLC23A1Q9UHI7 598 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 NUP50Q9UKX7 468 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 ANAPC10Q9UM13 185 aa12.49□□□□□ -0.41
SEC13-215ENST00000477547 IGKV1-6A0A0C4DH72 117 aa12.48□□□□□ -0.41
SEC13-215ENST00000477547 GABARAPH6UMI1 98 aa12.48□□□□□ -0.41
SEC13-215ENST00000477547 NPFFO15130 113 aa12.48□□□□□ -0.41
SEC13-215ENST00000477547 BET1O15155 118 aa12.48□□□□□ -0.41
SEC13-215ENST00000477547 HSPA12AO43301 675 aa12.48□□□□□ -0.41
SEC13-215ENST00000477547 ARG1P05089 322 aa12.48□□□□□ -0.41
SEC13-215ENST00000477547 PPP1CCP36873 323 aaKnown RBP12.48□□□□□ -0.41
SEC13-215ENST00000477547 UBE2E1P51965 193 aa12.48□□□□□ -0.41
SEC13-215ENST00000477547 ACTBP60709 375 aa12.48□□□□□ -0.41
SEC13-215ENST00000477547 ACTG1P63261 375 aa12.48□□□□□ -0.41
SEC13-215ENST00000477547 HTD2P86397 168 aa12.48□□□□□ -0.41
SEC13-215ENST00000477547 ZNF79Q15937 498 aa12.48□□□□□ -0.41
SEC13-215ENST00000477547 IGSF11Q5DX21 431 aa12.48□□□□□ -0.41
SEC13-215ENST00000477547 ZNF626Q68DY1 528 aa12.48□□□□□ -0.41
SEC13-215ENST00000477547 ABHD12Q8N2K0 398 aa12.48□□□□□ -0.41
SEC13-215ENST00000477547 OR9G1Q8NH87 305 aa12.48□□□□□ -0.41
SEC13-215ENST00000477547 BEX2Q9BXY8 128 aa12.48□□□□□ -0.41
SEC13-215ENST00000477547 ANXA10Q9UJ72 324 aa12.48□□□□□ -0.41
SEC13-215ENST00000477547 ANK2Q01484 3957 aa12.48□□□□□ -0.41
SEC13-215ENST00000477547 ODF3BA8MYP8 253 aa12.47□□□□□ -0.41
SEC13-215ENST00000477547 CTDSPLO15194 276 aa12.47□□□□□ -0.41
SEC13-215ENST00000477547 RGS11O94810 467 aa12.47□□□□□ -0.41
SEC13-215ENST00000477547 DIRAS3O95661 229 aa12.47□□□□□ -0.41
SEC13-215ENST00000477547 SRD5A1P18405 259 aa12.47□□□□□ -0.41
SEC13-215ENST00000477547 EPHA1P21709 976 aa12.47□□□□□ -0.41
SEC13-215ENST00000477547 SAA4P35542 130 aa12.47□□□□□ -0.41
SEC13-215ENST00000477547 ETV6P41212 452 aa12.47□□□□□ -0.41
SEC13-215ENST00000477547 CHRFAM7AQ494W8 412 aa12.47□□□□□ -0.41
SEC13-215ENST00000477547 PYDC2Q56P42 97 aa12.47□□□□□ -0.41
SEC13-215ENST00000477547 OR11H6Q8NGC7 330 aa12.47□□□□□ -0.41
SEC13-215ENST00000477547 FCAMRQ8WWV6 532 aa12.47□□□□□ -0.41
SEC13-215ENST00000477547 SOSTQ9BQB4 213 aa12.47□□□□□ -0.41
SEC13-215ENST00000477547 GINS4Q9BRT9 223 aa12.47□□□□□ -0.41
SEC13-215ENST00000477547 PSG11Q9UQ72 335 aa12.47□□□□□ -0.41
SEC13-215ENST00000477547 A0A1W2PPE3 182 aa12.46□□□□□ -0.41
SEC13-215ENST00000477547 TOR1AO14656 332 aa12.46□□□□□ -0.41
SEC13-215ENST00000477547 ZBTB25P24278 435 aa12.46□□□□□ -0.41
SEC13-215ENST00000477547 PTBP1P26599 531 aaKnown RBP eCLIP12.46□□□□□ -0.41
SEC13-215ENST00000477547 TAS2R46P59540 309 aa12.46□□□□□ -0.41
SEC13-215ENST00000477547 HLA-DRB5Q30154 266 aa12.46□□□□□ -0.41
SEC13-215ENST00000477547 OR10J5Q8NHC4 309 aa12.46□□□□□ -0.41
SEC13-215ENST00000477547 ZNF596Q8TC21 504 aa12.46□□□□□ -0.41
SEC13-215ENST00000477547 MS4A7Q9GZW8 240 aaPredicted RBP12.46□□□□□ -0.41
SEC13-215ENST00000477547 ZNRD1Q9P1U0 126 aa12.46□□□□□ -0.41
SEC13-215ENST00000477547 KLK11Q9UBX7 282 aa12.46□□□□□ -0.41
SEC13-215ENST00000477547 ZNF69Q9UC07 566 aa12.46□□□□□ -0.41
SEC13-215ENST00000477547 MTFP1Q9UDX5 166 aa12.46□□□□□ -0.41
SEC13-215ENST00000477547 TRBV6-7A0A0A0MS04 114 aa12.45□□□□□ -0.42
SEC13-215ENST00000477547 J3QR06 171 aa12.45□□□□□ -0.42
SEC13-215ENST00000477547 SLC31A2O15432 143 aa12.45□□□□□ -0.42
SEC13-215ENST00000477547 GSTZ1O43708 216 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms