RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 OR10X1Q8NGY0 326 aa12.36□□□□□ -0.43
COMMD6-209ENST00000477377 FAM110DQ8TAY7 271 aaPredicted RBP12.36□□□□□ -0.43
COMMD6-209ENST00000477377 PRKDCP78527 4128 aaKnown RBP12.35□□□□□ -0.43
COMMD6-209ENST00000477377 ZNF736B4DX44 427 aaPredicted RBP12.35□□□□□ -0.43
COMMD6-209ENST00000477377 FBXO24O75426 580 aa12.35□□□□□ -0.43
COMMD6-209ENST00000477377 IGKV1D-33P01593 117 aa12.35□□□□□ -0.43
COMMD6-209ENST00000477377 IGKV1-33P01594 117 aa12.35□□□□□ -0.43
COMMD6-209ENST00000477377 LPLP06858 475 aa12.35□□□□□ -0.43
COMMD6-209ENST00000477377 CSF1P09603 554 aa12.35□□□□□ -0.43
COMMD6-209ENST00000477377 CALRP27797 417 aaKnown RBP12.35□□□□□ -0.43
COMMD6-209ENST00000477377 VDAC2P45880 294 aaPredicted RBP12.35□□□□□ -0.43
COMMD6-209ENST00000477377 ARHGDIBP52566 201 aa12.35□□□□□ -0.43
COMMD6-209ENST00000477377 CLDN12P56749 244 aa12.35□□□□□ -0.43
COMMD6-209ENST00000477377 GABARAPL2P60520 117 aa12.35□□□□□ -0.43
COMMD6-209ENST00000477377 GNMTQ14749 295 aa12.35□□□□□ -0.43
COMMD6-209ENST00000477377 HMGN3Q15651 99 aa12.35□□□□□ -0.43
COMMD6-209ENST00000477377 ZNF554Q86TJ5 538 aa12.35□□□□□ -0.43
COMMD6-209ENST00000477377 ODF3L1Q8IXM7 274 aa12.35□□□□□ -0.43
COMMD6-209ENST00000477377 SPARTQ8N0X7 666 aa12.35□□□□□ -0.43
COMMD6-209ENST00000477377 C5orf56Q8N8D9 126 aa12.35□□□□□ -0.43
COMMD6-209ENST00000477377 OR51D1Q8NGF3 324 aa12.35□□□□□ -0.43
COMMD6-209ENST00000477377 OR52L2PQ8NGH6 319 aa12.35□□□□□ -0.43
COMMD6-209ENST00000477377 RTN4IP1Q8WWV3 396 aaPredicted RBP12.35□□□□□ -0.43
COMMD6-209ENST00000477377 CITED2Q99967 270 aaPredicted RBP12.35□□□□□ -0.43
COMMD6-209ENST00000477377 NDUFB11Q9NX14 153 aa12.35□□□□□ -0.43
COMMD6-209ENST00000477377 IGHV3-72A0A0B4J1Y9 119 aa12.34□□□□□ -0.43
COMMD6-209ENST00000477377 CCRL2O00421 344 aa12.34□□□□□ -0.43
COMMD6-209ENST00000477377 SPINT2O43291 252 aa12.34□□□□□ -0.43
COMMD6-209ENST00000477377 MRPS14O60783 128 aaKnown RBP12.34□□□□□ -0.43
COMMD6-209ENST00000477377 ARL6IP5O75915 188 aa12.34□□□□□ -0.43
COMMD6-209ENST00000477377 GAPDHP04406 335 aaKnown RBP12.34□□□□□ -0.43
COMMD6-209ENST00000477377 BLVRBP30043 206 aaPredicted RBP12.34□□□□□ -0.43
COMMD6-209ENST00000477377 CD83Q01151 205 aa12.34□□□□□ -0.43
COMMD6-209ENST00000477377 C2orf76Q3KRA6 126 aa12.34□□□□□ -0.43
COMMD6-209ENST00000477377 TMEM30BQ3MIR4 351 aa12.34□□□□□ -0.43
COMMD6-209ENST00000477377 UBE2UQ5VVX9 321 aa12.34□□□□□ -0.43
COMMD6-209ENST00000477377 TRAT1Q6PIZ9 186 aa12.34□□□□□ -0.43
COMMD6-209ENST00000477377 OR2W3Q7Z3T1 314 aa12.34□□□□□ -0.43
COMMD6-209ENST00000477377 NR2C2APQ86WQ0 139 aa12.34□□□□□ -0.43
COMMD6-209ENST00000477377 PRR18Q8N4B5 295 aa12.34□□□□□ -0.43
COMMD6-209ENST00000477377 AKR1E2Q96JD6 320 aa12.34□□□□□ -0.43
COMMD6-209ENST00000477377 NEDD4LQ96PU5 975 aa12.34□□□□□ -0.43
COMMD6-209ENST00000477377 PLSCR3Q9NRY6 295 aa12.34□□□□□ -0.43
COMMD6-209ENST00000477377 BLOC1S6Q9UL45 172 aa12.34□□□□□ -0.43
COMMD6-209ENST00000477377 MOB4Q9Y3A3 225 aa12.34□□□□□ -0.43
COMMD6-209ENST00000477377 DNAH3Q8TD57 4116 aa12.33□□□□□ -0.44
COMMD6-209ENST00000477377 TRBV6-6A0A0A6YYG2 114 aa12.33□□□□□ -0.44
COMMD6-209ENST00000477377 TRDV1A0A1B0GX56 115 aa12.33□□□□□ -0.44
COMMD6-209ENST00000477377 H3BUI4 141 aa12.33□□□□□ -0.44
COMMD6-209ENST00000477377 ARSBP15848 533 aa12.33□□□□□ -0.44
COMMD6-209ENST00000477377 TMEM11P17152 192 aa12.33□□□□□ -0.44
COMMD6-209ENST00000477377 OR10A3P58181 314 aa12.33□□□□□ -0.44
COMMD6-209ENST00000477377 HTD2P86397 168 aa12.33□□□□□ -0.44
COMMD6-209ENST00000477377 HNF4GQ14541 408 aa12.33□□□□□ -0.44
COMMD6-209ENST00000477377 PLAC9Q5JTB6 97 aa12.33□□□□□ -0.44
COMMD6-209ENST00000477377 LY6G6FQ5SQ64 297 aa12.33□□□□□ -0.44
COMMD6-209ENST00000477377 STEAP3Q658P3 488 aa12.33□□□□□ -0.44
COMMD6-209ENST00000477377 IZUMO1Q8IYV9 350 aa12.33□□□□□ -0.44
COMMD6-209ENST00000477377 SVOPQ8N4V2 548 aa12.33□□□□□ -0.44
COMMD6-209ENST00000477377 OR5AU1Q8NGC0 362 aa12.33□□□□□ -0.44
COMMD6-209ENST00000477377 EAF1Q96JC9 268 aaPredicted RBP12.33□□□□□ -0.44
COMMD6-209ENST00000477377 HDHD3Q9BSH5 251 aaPredicted RBP12.33□□□□□ -0.44
COMMD6-209ENST00000477377 OR2S2Q9NQN1 319 aa12.33□□□□□ -0.44
COMMD6-209ENST00000477377 V9GY05 133 aa12.33□□□□□ -0.44
COMMD6-209ENST00000477377 TRAV1-2A0A0B4J238 106 aa12.32□□□□□ -0.44
COMMD6-209ENST00000477377 TMEM272A0A1B0GTI8 110 aa12.32□□□□□ -0.44
COMMD6-209ENST00000477377 LINC01548A6NM66 108 aa12.32□□□□□ -0.44
COMMD6-209ENST00000477377 M0QZK8 103 aa12.32□□□□□ -0.44
COMMD6-209ENST00000477377 FGF16O43320 207 aa12.32□□□□□ -0.44
COMMD6-209ENST00000477377 YPEL1O60688 119 aa12.32□□□□□ -0.44
COMMD6-209ENST00000477377 OPN1MWP04001 364 aa12.32□□□□□ -0.44
COMMD6-209ENST00000477377 OPN1MW2P0DN77 364 aa12.32□□□□□ -0.44
COMMD6-209ENST00000477377 OPN1MW3P0DN78 364 aa12.32□□□□□ -0.44
COMMD6-209ENST00000477377 PPP1CCP36873 323 aaKnown RBP12.32□□□□□ -0.44
COMMD6-209ENST00000477377 DEFA6Q01524 100 aa12.32□□□□□ -0.44
COMMD6-209ENST00000477377 RAB11BQ15907 218 aa12.32□□□□□ -0.44
COMMD6-209ENST00000477377 MOB3BQ86TA1 216 aa12.32□□□□□ -0.44
COMMD6-209ENST00000477377 NDUFA11Q86Y39 141 aa12.32□□□□□ -0.44
COMMD6-209ENST00000477377 FAM3DQ96BQ1 224 aa12.32□□□□□ -0.44
COMMD6-209ENST00000477377 YPEL2Q96QA6 119 aa12.32□□□□□ -0.44
COMMD6-209ENST00000477377 PLGRKTQ9HBL7 147 aa12.32□□□□□ -0.44
COMMD6-209ENST00000477377 GNG12Q9UBI6 72 aa12.32□□□□□ -0.44
COMMD6-209ENST00000477377 AK3Q9UIJ7 227 aa12.32□□□□□ -0.44
COMMD6-209ENST00000477377 JPT1Q9UK76 154 aa12.32□□□□□ -0.44
COMMD6-209ENST00000477377 HSF4Q9ULV5 492 aa12.32□□□□□ -0.44
COMMD6-209ENST00000477377 KCNK7Q9Y2U2 307 aa12.32□□□□□ -0.44
COMMD6-209ENST00000477377 LRRC42Q9Y546 428 aa12.32□□□□□ -0.44
COMMD6-209ENST00000477377 GALP22466 123 aa12.31□□□□□ -0.44
COMMD6-209ENST00000477377 CD1BP29016 333 aa12.31□□□□□ -0.44
COMMD6-209ENST00000477377 NSUN5P1Q3KNT7 163 aa12.31□□□□□ -0.44
COMMD6-209ENST00000477377 HES5Q5TA89 166 aa12.31□□□□□ -0.44
COMMD6-209ENST00000477377 Q8N9W7 124 aa12.31□□□□□ -0.44
COMMD6-209ENST00000477377 ARHGAP5-AS1Q96IT6 56 aa12.31□□□□□ -0.44
COMMD6-209ENST00000477377 YTHDF1Q9BYJ9 559 aaKnown RBP12.31□□□□□ -0.44
COMMD6-209ENST00000477377 PLEKHJ1Q9NW61 149 aa12.31□□□□□ -0.44
COMMD6-209ENST00000477377 KCNIP1Q9NZI2 227 aa12.31□□□□□ -0.44
COMMD6-209ENST00000477377 STEAP1Q9UHE8 339 aa12.31□□□□□ -0.44
COMMD6-209ENST00000477377 LANCL1O43813 399 aa12.3□□□□□ -0.44
COMMD6-209ENST00000477377 VEGFCP49767 419 aa12.3□□□□□ -0.44
COMMD6-209ENST00000477377 F2RL1P55085 397 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms