RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 GHITMQ9H3K2 345 aa16.2■□□□□ 0.18
VARS2-209ENST00000477288 ZNF256Q9Y2P7 627 aaPredicted RBP16.2■□□□□ 0.18
VARS2-209ENST00000477288 TCRBV16S1A1N1A0A5B0 115 aa16.2■□□□□ 0.18
VARS2-209ENST00000477288 FBLL1A6NHQ2 334 aaKnown RBP16.2■□□□□ 0.18
VARS2-209ENST00000477288 C5orf67F2Z3F1 127 aa16.2■□□□□ 0.18
VARS2-209ENST00000477288 TEX30Q5JUR7 227 aa16.2■□□□□ 0.18
VARS2-209ENST00000477288 ELOVL1Q9BW60 279 aa16.2■□□□□ 0.18
VARS2-209ENST00000477288 SF3B6Q9Y3B4 125 aaKnown RBP16.2■□□□□ 0.18
VARS2-209ENST00000477288 ELOA3CA0A087WX78 387 aaPredicted RBP16.2■□□□□ 0.18
VARS2-209ENST00000477288 CLDN14O95500 239 aa16.2■□□□□ 0.18
VARS2-209ENST00000477288 PF4V1P10720 104 aa16.2■□□□□ 0.18
VARS2-209ENST00000477288 ZAR1Q86SH2 424 aa16.2■□□□□ 0.18
VARS2-209ENST00000477288 BRWD1Q9NSI6 2320 aa16.2■□□□□ 0.18
VARS2-209ENST00000477288 SCN1AP35498 2009 aa16.2■□□□□ 0.18
VARS2-209ENST00000477288 IGHV3-72A0A0B4J1Y9 119 aa16.2■□□□□ 0.18
VARS2-209ENST00000477288 ZNF735P0CB33 412 aa16.2■□□□□ 0.18
VARS2-209ENST00000477288 HMGA2P52926 109 aa16.2■□□□□ 0.18
VARS2-209ENST00000477288 PRSS8Q16651 343 aa16.2■□□□□ 0.18
VARS2-209ENST00000477288 TM4SF20Q53R12 229 aa16.2■□□□□ 0.18
VARS2-209ENST00000477288 CYB5R1Q9UHQ9 305 aa16.2■□□□□ 0.18
VARS2-209ENST00000477288 SS18L1O75177 396 aaPredicted RBP16.19■□□□□ 0.18
VARS2-209ENST00000477288 GCGP01275 180 aa16.19■□□□□ 0.18
VARS2-209ENST00000477288 BGLAPP02818 100 aa16.19■□□□□ 0.18
VARS2-209ENST00000477288 SLC35B1P78383 322 aa16.19■□□□□ 0.18
VARS2-209ENST00000477288 ZNF658BQ4V348 819 aaPredicted RBP16.19■□□□□ 0.18
VARS2-209ENST00000477288 PAXXQ9BUH6 204 aa16.19■□□□□ 0.18
VARS2-209ENST00000477288 PRDX2P32119 198 aa16.19■□□□□ 0.18
VARS2-209ENST00000477288 TMEM50BP56557 158 aa16.19■□□□□ 0.18
VARS2-209ENST00000477288 SMAGPQ0VAQ4 97 aa16.19■□□□□ 0.18
VARS2-209ENST00000477288 PMS2CLQ68D20 193 aa16.19■□□□□ 0.18
VARS2-209ENST00000477288 DMKNQ6E0U4 476 aaPredicted RBP16.19■□□□□ 0.18
VARS2-209ENST00000477288 RELBQ01201 579 aa16.19■□□□□ 0.18
VARS2-209ENST00000477288 ZNF714Q96N38 554 aa16.19■□□□□ 0.18
VARS2-209ENST00000477288 NKX2-8O15522 239 aa16.19■□□□□ 0.18
VARS2-209ENST00000477288 HIST1H1BP16401 226 aaKnown RBP16.19■□□□□ 0.18
VARS2-209ENST00000477288 METTL26Q96S19 204 aa16.19■□□□□ 0.18
VARS2-209ENST00000477288 NUDT16L1Q9BRJ7 211 aaKnown RBP16.19■□□□□ 0.18
VARS2-209ENST00000477288 ZNHIT1O43257 154 aa16.19■□□□□ 0.18
VARS2-209ENST00000477288 SLC25A42Q86VD7 318 aa16.19■□□□□ 0.18
VARS2-209ENST00000477288 OR10J6PQ8NGY7 276 aa16.19■□□□□ 0.18
VARS2-209ENST00000477288 VN1R17PQ8TDU5 208 aa16.19■□□□□ 0.18
VARS2-209ENST00000477288 ZNF385AQ96PM9 386 aaKnown RBP16.19■□□□□ 0.18
VARS2-209ENST00000477288 A0A087X0M5 115 aa16.18■□□□□ 0.18
VARS2-209ENST00000477288 A0A1B0GX30 115 aa16.18■□□□□ 0.18
VARS2-209ENST00000477288 PGA4P0DJD7 388 aa16.18■□□□□ 0.18
VARS2-209ENST00000477288 PGA5P0DJD9 388 aa16.18■□□□□ 0.18
VARS2-209ENST00000477288 RAG2P55895 527 aa16.18■□□□□ 0.18
VARS2-209ENST00000477288 TPRX1Q8N7U7 411 aa16.18■□□□□ 0.18
VARS2-209ENST00000477288 ZNF738Q8NE65 137 aa16.18■□□□□ 0.18
VARS2-209ENST00000477288 HMSDA8MTL9 139 aa16.18■□□□□ 0.18
VARS2-209ENST00000477288 SURF2Q15527 256 aaPredicted RBP16.18■□□□□ 0.18
VARS2-209ENST00000477288 NUP37Q8NFH4 326 aa16.18■□□□□ 0.18
VARS2-209ENST00000477288 RPL36A-HNRNPH2H7BZ11 118 aa16.18■□□□□ 0.18
VARS2-209ENST00000477288 ACAA1P09110 424 aaPredicted RBP16.18■□□□□ 0.18
VARS2-209ENST00000477288 NFAM1Q8NET5 270 aaPredicted RBP16.18■□□□□ 0.18
VARS2-209ENST00000477288 ADAT3Q96EY9 351 aaPredicted RBP16.18■□□□□ 0.18
VARS2-209ENST00000477288 HDHD3Q9BSH5 251 aaPredicted RBP16.18■□□□□ 0.18
VARS2-209ENST00000477288 TMEM189A5PLL7 270 aa16.18■□□□□ 0.18
VARS2-209ENST00000477288 MAS1LP35410 378 aa16.18■□□□□ 0.18
VARS2-209ENST00000477288 COX19Q49B96 90 aa16.18■□□□□ 0.18
VARS2-209ENST00000477288 PAM16Q9Y3D7 125 aa16.18■□□□□ 0.18
VARS2-209ENST00000477288 IGF2P01344 180 aa16.18■□□□□ 0.18
VARS2-209ENST00000477288 ZNF25P17030 456 aaPredicted RBP16.18■□□□□ 0.18
VARS2-209ENST00000477288 KRTCAP3Q53RY4 240 aa16.18■□□□□ 0.18
VARS2-209ENST00000477288 OR4D11Q8NGI4 311 aa16.18■□□□□ 0.18
VARS2-209ENST00000477288 FAM216AQ8WUB2 273 aa16.18■□□□□ 0.18
VARS2-209ENST00000477288 DIRC2Q96SL1 478 aa16.18■□□□□ 0.18
VARS2-209ENST00000477288 AKIRIN1Q9H9L7 192 aaPredicted RBP16.18■□□□□ 0.18
VARS2-209ENST00000477288 COL24A1Q17RW2 1714 aa16.18■□□□□ 0.18
VARS2-209ENST00000477288 ABCA3Q99758 1704 aa16.17■□□□□ 0.18
VARS2-209ENST00000477288 CRHP06850 196 aa16.17■□□□□ 0.18
VARS2-209ENST00000477288 HERPUD1Q15011 391 aa16.17■□□□□ 0.18
VARS2-209ENST00000477288 STXBP6Q8NFX7 210 aa16.17■□□□□ 0.18
VARS2-209ENST00000477288 ZNF721Q8TF20 911 aa16.17■□□□□ 0.18
VARS2-209ENST00000477288 PLAC1Q9HBJ0 212 aa16.17■□□□□ 0.18
VARS2-209ENST00000477288 COMPP49747 757 aaPredicted RBP16.17■□□□□ 0.18
VARS2-209ENST00000477288 C19orf48Q6RUI8 117 aa16.17■□□□□ 0.18
VARS2-209ENST00000477288 LINC00596Q86U02 117 aa16.17■□□□□ 0.18
VARS2-209ENST00000477288 GUCD1Q96NT3 240 aa16.17■□□□□ 0.18
VARS2-209ENST00000477288 CBLN2Q8IUK8 224 aa16.17■□□□□ 0.18
VARS2-209ENST00000477288 LSMEM1Q8N8F7 131 aa16.17■□□□□ 0.18
VARS2-209ENST00000477288 BVESQ8NE79 360 aa16.17■□□□□ 0.18
VARS2-209ENST00000477288 NEU3Q9UQ49 428 aa16.17■□□□□ 0.18
VARS2-209ENST00000477288 K7N7A8 449 aa16.17■□□□□ 0.18
VARS2-209ENST00000477288 OGG1O15527 345 aa16.17■□□□□ 0.18
VARS2-209ENST00000477288 CD160O95971 181 aa16.17■□□□□ 0.18
VARS2-209ENST00000477288 CELA2AP08217 269 aa16.17■□□□□ 0.18
VARS2-209ENST00000477288 COTL1Q14019 142 aa16.17■□□□□ 0.18
VARS2-209ENST00000477288 ZNF519Q8TB69 540 aa16.17■□□□□ 0.18
VARS2-209ENST00000477288 TMEM78Q5T7P6 136 aa16.16■□□□□ 0.18
VARS2-209ENST00000477288 PGLYRP3Q96LB9 341 aa16.16■□□□□ 0.18
VARS2-209ENST00000477288 RAB33BQ9H082 229 aa16.16■□□□□ 0.18
VARS2-209ENST00000477288 HYPMO75409 117 aa16.16■□□□□ 0.18
VARS2-209ENST00000477288 FAM106CPP0CH98 169 aa16.16■□□□□ 0.18
VARS2-209ENST00000477288 SYT8Q8NBV8 401 aa16.16■□□□□ 0.18
VARS2-209ENST00000477288 ZFP30Q9Y2G7 519 aa16.16■□□□□ 0.18
VARS2-209ENST00000477288 B4E171 279 aa16.16■□□□□ 0.18
VARS2-209ENST00000477288 TSPAN7P41732 249 aa16.16■□□□□ 0.18
VARS2-209ENST00000477288 WDFY1Q8IWB7 410 aa16.16■□□□□ 0.18
VARS2-209ENST00000477288 OR8G5Q8NG78 346 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms