RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 PEX16Q9Y5Y5 336 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 WSB1Q9Y6I7 421 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 MCRIP1C9JLW8 97 aa9.12□□□□□ -0.95
VARS2-208ENST00000477052 ORC5O43913 435 aa9.12□□□□□ -0.95
VARS2-208ENST00000477052 CD1BP29016 333 aa9.12□□□□□ -0.95
VARS2-208ENST00000477052 ECI1P42126 302 aa9.12□□□□□ -0.95
VARS2-208ENST00000477052 MED21Q13503 144 aa9.12□□□□□ -0.95
VARS2-208ENST00000477052 CXorf66Q5JRM2 361 aaPredicted RBP9.12□□□□□ -0.95
VARS2-208ENST00000477052 C6orf141Q5SZD1 244 aa9.12□□□□□ -0.95
VARS2-208ENST00000477052 SLC25A48Q6ZT89 311 aaKnown RBP9.12□□□□□ -0.95
VARS2-208ENST00000477052 STX19Q8N4C7 294 aa9.12□□□□□ -0.95
VARS2-208ENST00000477052 COMMD1Q8N668 190 aa9.12□□□□□ -0.95
VARS2-208ENST00000477052 BPIFB6Q8NFQ5 453 aa9.12□□□□□ -0.95
VARS2-208ENST00000477052 OR52M1Q8NGK5 317 aa9.12□□□□□ -0.95
VARS2-208ENST00000477052 FAM46BQ96A09 425 aa9.12□□□□□ -0.95
VARS2-208ENST00000477052 TMEM80Q96HE8 168 aa9.12□□□□□ -0.95
VARS2-208ENST00000477052 PGLYRP3Q96LB9 341 aa9.12□□□□□ -0.95
VARS2-208ENST00000477052 MCRIP2Q9BUT9 160 aaKnown RBP9.12□□□□□ -0.95
VARS2-208ENST00000477052 GPR61Q9BZJ8 451 aa9.12□□□□□ -0.95
VARS2-208ENST00000477052 SELENOIQ9C0D9 397 aa9.12□□□□□ -0.95
VARS2-208ENST00000477052 KLK15Q9H2R5 256 aa9.12□□□□□ -0.95
VARS2-208ENST00000477052 FKBP14Q9NWM8 211 aa9.12□□□□□ -0.95
VARS2-208ENST00000477052 PAK1IP1Q9NWT1 392 aaPredicted RBP9.12□□□□□ -0.95
VARS2-208ENST00000477052 EXOSC1Q9Y3B2 195 aaKnown RBP9.12□□□□□ -0.95
VARS2-208ENST00000477052 TRBV5-7A0A0A0MS05 114 aa9.11□□□□□ -0.95
VARS2-208ENST00000477052 G3V318 75 aa9.11□□□□□ -0.95
VARS2-208ENST00000477052 SPINT2O43291 252 aa9.11□□□□□ -0.95
VARS2-208ENST00000477052 CRTAPO75718 401 aaPredicted RBP9.11□□□□□ -0.95
VARS2-208ENST00000477052 MYL12AP19105 171 aa9.11□□□□□ -0.95
VARS2-208ENST00000477052 IL3RAP26951 378 aa9.11□□□□□ -0.95
VARS2-208ENST00000477052 SOX6P35712 828 aa9.11□□□□□ -0.95
VARS2-208ENST00000477052 PPP1CCP36873 323 aaKnown RBP9.11□□□□□ -0.95
VARS2-208ENST00000477052 CFHR3Q02985 330 aa9.11□□□□□ -0.95
VARS2-208ENST00000477052 ST3GAL4Q11206 333 aa9.11□□□□□ -0.95
VARS2-208ENST00000477052 FOXE3Q13461 319 aa9.11□□□□□ -0.95
VARS2-208ENST00000477052 INSL4Q14641 139 aa9.11□□□□□ -0.95
VARS2-208ENST00000477052 Q499Y3 187 aa9.11□□□□□ -0.95
VARS2-208ENST00000477052 NKAPLQ5M9Q1 402 aa9.11□□□□□ -0.95
VARS2-208ENST00000477052 AWAT2Q6E213 333 aa9.11□□□□□ -0.95
VARS2-208ENST00000477052 SIGIRRQ6IA17 410 aa9.11□□□□□ -0.95
VARS2-208ENST00000477052 LINC00596Q86U02 117 aa9.11□□□□□ -0.95
VARS2-208ENST00000477052 FAM71E2Q8N5Q1 922 aa9.11□□□□□ -0.95
VARS2-208ENST00000477052 C8orf31Q8N9H6 132 aa9.11□□□□□ -0.95
VARS2-208ENST00000477052 ZNF485Q8NCK3 441 aa9.11□□□□□ -0.95
VARS2-208ENST00000477052 KCTD7Q96MP8 289 aa9.11□□□□□ -0.95
VARS2-208ENST00000477052 KCNK15Q9H427 330 aa9.11□□□□□ -0.95
VARS2-208ENST00000477052 GNB4Q9HAV0 340 aa9.11□□□□□ -0.95
VARS2-208ENST00000477052 TAF9BQ9HBM6 251 aa9.11□□□□□ -0.95
VARS2-208ENST00000477052 RCC2Q9P258 522 aaKnown RBP9.11□□□□□ -0.95
VARS2-208ENST00000477052 SCOCQ9UIL1 159 aa9.11□□□□□ -0.95
VARS2-208ENST00000477052 LRRC42Q9Y546 428 aa9.11□□□□□ -0.95
VARS2-208ENST00000477052 SEC14L6B5MCN3 397 aa9.1□□□□□ -0.95
VARS2-208ENST00000477052 ZNF780AO75290 641 aaPredicted RBP9.1□□□□□ -0.95
VARS2-208ENST00000477052 SNRPBP14678 240 aaKnown RBP9.1□□□□□ -0.95
VARS2-208ENST00000477052 MGMTP16455 207 aa9.1□□□□□ -0.95
VARS2-208ENST00000477052 VDAC1P21796 283 aa9.1□□□□□ -0.95
VARS2-208ENST00000477052 OR3A3P47888 321 aa9.1□□□□□ -0.95
VARS2-208ENST00000477052 CDX1P47902 265 aaPredicted RBP9.1□□□□□ -0.95
VARS2-208ENST00000477052 LSAMPQ13449 338 aa9.1□□□□□ -0.95
VARS2-208ENST00000477052 KIR2DS1Q14954 304 aa9.1□□□□□ -0.95
VARS2-208ENST00000477052 MMDQ15546 238 aa9.1□□□□□ -0.95
VARS2-208ENST00000477052 OR10K2Q6IF99 312 aa9.1□□□□□ -0.95
VARS2-208ENST00000477052 AHSA2Q719I0 299 aa9.1□□□□□ -0.95
VARS2-208ENST00000477052 OR5M8Q8NGP6 311 aa9.1□□□□□ -0.95
VARS2-208ENST00000477052 OR8U1Q8NH10 309 aa9.1□□□□□ -0.95
VARS2-208ENST00000477052 CASTOR1Q8WTX7 329 aa9.1□□□□□ -0.95
VARS2-208ENST00000477052 CNBD2Q96M20 576 aa9.1□□□□□ -0.95
VARS2-208ENST00000477052 WWC2-AS2Q96NR7 200 aa9.1□□□□□ -0.95
VARS2-208ENST00000477052 MRPL20Q9BYC9 149 aaKnown RBP9.1□□□□□ -0.95
VARS2-208ENST00000477052 Q9H521 79 aa9.1□□□□□ -0.95
VARS2-208ENST00000477052 OR2S2Q9NQN1 319 aa9.1□□□□□ -0.95
VARS2-208ENST00000477052 CHCHD3Q9NX63 227 aaKnown RBP9.1□□□□□ -0.95
VARS2-208ENST00000477052 SCN3BQ9NY72 215 aa9.1□□□□□ -0.95
VARS2-208ENST00000477052 CKLFQ9UBR5 152 aa9.1□□□□□ -0.95
VARS2-208ENST00000477052 ZNF107Q9UII5 783 aaPredicted RBP9.1□□□□□ -0.95
VARS2-208ENST00000477052 A6NHS1 94 aa9.09□□□□□ -0.95
VARS2-208ENST00000477052 GPX5O75715 221 aa9.09□□□□□ -0.95
VARS2-208ENST00000477052 IGHG4P01861 327 aa9.09□□□□□ -0.95
VARS2-208ENST00000477052 CDK1P06493 297 aa9.09□□□□□ -0.95
VARS2-208ENST00000477052 ELANEP08246 267 aa9.09□□□□□ -0.95
VARS2-208ENST00000477052 FSTP19883 344 aa9.09□□□□□ -0.95
VARS2-208ENST00000477052 PSMB8P28062 276 aa9.09□□□□□ -0.95
VARS2-208ENST00000477052 SLC6A1P30531 599 aa9.09□□□□□ -0.95
VARS2-208ENST00000477052 GPR176Q14439 515 aa9.09□□□□□ -0.95
VARS2-208ENST00000477052 ZNF260Q3ZCT1 412 aa9.09□□□□□ -0.95
VARS2-208ENST00000477052 MORN2Q502X0 79 aa9.09□□□□□ -0.95
VARS2-208ENST00000477052 YIF1BQ5BJH7 314 aa9.09□□□□□ -0.95
VARS2-208ENST00000477052 C6orf183Q5T699 404 aa9.09□□□□□ -0.95
VARS2-208ENST00000477052 FAM27D1Q5T7N8 215 aa9.09□□□□□ -0.95
VARS2-208ENST00000477052 ASPHD1Q5U4P2 390 aa9.09□□□□□ -0.95
VARS2-208ENST00000477052 ODF3L1Q8IXM7 274 aa9.09□□□□□ -0.95
VARS2-208ENST00000477052 RNF152Q8N8N0 203 aa9.09□□□□□ -0.95
VARS2-208ENST00000477052 OR11H1Q8NG94 326 aa9.09□□□□□ -0.95
VARS2-208ENST00000477052 C4orf3Q8WVX3 66 aa9.09□□□□□ -0.95
VARS2-208ENST00000477052 Q96M66 194 aa9.09□□□□□ -0.95
VARS2-208ENST00000477052 FAM210AQ96ND0 272 aa9.09□□□□□ -0.95
VARS2-208ENST00000477052 DERL3Q96Q80 235 aa9.09□□□□□ -0.95
VARS2-208ENST00000477052 ALX4Q9H161 411 aaPredicted RBP9.09□□□□□ -0.95
VARS2-208ENST00000477052 VCX3AQ9NNX9 186 aa9.09□□□□□ -0.95
VARS2-208ENST00000477052 PARP11Q9NR21 331 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms