RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 CACNG5Q9UF02 275 aa17.8■□□□□ 0.44
LIMS2-214ENST00000476932 SRP19P09132 144 aaKnown RBP17.79■□□□□ 0.44
LIMS2-214ENST00000476932 SNRPEP62304 92 aaKnown RBP17.79■□□□□ 0.44
LIMS2-214ENST00000476932 ICAM4Q14773 271 aa17.79■□□□□ 0.44
LIMS2-214ENST00000476932 HAGHQ16775 308 aa17.79■□□□□ 0.44
LIMS2-214ENST00000476932 ZNF585BQ52M93 769 aa17.79■□□□□ 0.44
LIMS2-214ENST00000476932 ZNF766Q5HY98 468 aa17.79■□□□□ 0.44
LIMS2-214ENST00000476932 KRBOX4Q5JUW0 171 aa17.79■□□□□ 0.44
LIMS2-214ENST00000476932 SNIP1Q8TAD8 396 aaKnown RBP17.79■□□□□ 0.44
LIMS2-214ENST00000476932 LOXL4Q96JB6 756 aa17.79■□□□□ 0.44
LIMS2-214ENST00000476932 RAB40CQ96S21 281 aa17.79■□□□□ 0.44
LIMS2-214ENST00000476932 MBNL3Q9NUK0 354 aaKnown RBP17.79■□□□□ 0.44
LIMS2-214ENST00000476932 PPP1R3CQ9UQK1 317 aa17.79■□□□□ 0.44
LIMS2-214ENST00000476932 A0A1W2PPE3 182 aa17.79■□□□□ 0.44
LIMS2-214ENST00000476932 M0R296 226 aa17.79■□□□□ 0.44
LIMS2-214ENST00000476932 RAB5AP20339 215 aa17.79■□□□□ 0.44
LIMS2-214ENST00000476932 STX12Q86Y82 276 aa17.79■□□□□ 0.44
LIMS2-214ENST00000476932 Q8IYB0 196 aa17.79■□□□□ 0.44
LIMS2-214ENST00000476932 PUS1Q9Y606 427 aaKnown RBP eCLIP17.79■□□□□ 0.44
LIMS2-214ENST00000476932 WSB1Q9Y6I7 421 aa17.79■□□□□ 0.44
LIMS2-214ENST00000476932 C5orf52A6NGY3 159 aa17.78■□□□□ 0.44
LIMS2-214ENST00000476932 IGHV1-2P23083 117 aa17.78■□□□□ 0.44
LIMS2-214ENST00000476932 IDH3GP51553 393 aaPredicted RBP17.78■□□□□ 0.44
LIMS2-214ENST00000476932 RPS23P62266 143 aaKnown RBP17.78■□□□□ 0.44
LIMS2-214ENST00000476932 RPL23AP62750 156 aaKnown RBP17.78■□□□□ 0.44
LIMS2-214ENST00000476932 PMP22Q01453 160 aa17.78■□□□□ 0.44
LIMS2-214ENST00000476932 ZNF146Q15072 292 aa17.78■□□□□ 0.44
LIMS2-214ENST00000476932 AKR1C8PQ5T2L2 129 aa17.78■□□□□ 0.44
LIMS2-214ENST00000476932 FAM24BQ8N5W8 94 aa17.78■□□□□ 0.44
LIMS2-214ENST00000476932 POLDIP2Q9Y2S7 368 aa17.78■□□□□ 0.44
LIMS2-214ENST00000476932 PCNX2A6NKB5 2137 aa17.78■□□□□ 0.44
LIMS2-214ENST00000476932 CDIPTO14735 213 aa17.78■□□□□ 0.44
LIMS2-214ENST00000476932 TMPRSS7Q7RTY8 843 aa17.78■□□□□ 0.44
LIMS2-214ENST00000476932 GMPPAQ96IJ6 420 aaPredicted RBP17.78■□□□□ 0.44
LIMS2-214ENST00000476932 TRAPPC2LQ9UL33 140 aa17.78■□□□□ 0.44
LIMS2-214ENST00000476932 WIPI2Q9Y4P8 454 aa17.78■□□□□ 0.44
LIMS2-214ENST00000476932 PIGBOS1A0A0B4J2F0 54 aa17.77■□□□□ 0.44
LIMS2-214ENST00000476932 IGHV3-64DA0A0J9YX35 117 aa17.77■□□□□ 0.44
LIMS2-214ENST00000476932 EIF3GO75821 320 aaKnown RBP eCLIP17.77■□□□□ 0.44
LIMS2-214ENST00000476932 DFFBO76075 338 aa17.77■□□□□ 0.44
LIMS2-214ENST00000476932 SCAF4O95104 1147 aaKnown RBP17.77■□□□□ 0.44
LIMS2-214ENST00000476932 CNOT4O95628 575 aaKnown RBP17.77■□□□□ 0.44
LIMS2-214ENST00000476932 ARG2P78540 354 aa17.77■□□□□ 0.44
LIMS2-214ENST00000476932 ZNF506Q5JVG8 444 aa17.77■□□□□ 0.44
LIMS2-214ENST00000476932 DPPA3Q6W0C5 159 aa17.77■□□□□ 0.44
LIMS2-214ENST00000476932 ZNF561Q8N587 486 aa17.77■□□□□ 0.44
LIMS2-214ENST00000476932 CLDND2Q8NHS1 167 aa17.77■□□□□ 0.44
LIMS2-214ENST00000476932 SLC25A40Q8TBP6 338 aa17.77■□□□□ 0.44
LIMS2-214ENST00000476932 DIDO1Q9BTC0 2240 aaKnown RBP17.77■□□□□ 0.43
LIMS2-214ENST00000476932 SELEP16581 610 aa17.77■□□□□ 0.43
LIMS2-214ENST00000476932 MAS1LP35410 378 aa17.77■□□□□ 0.43
LIMS2-214ENST00000476932 MEOX2P50222 304 aa17.77■□□□□ 0.43
LIMS2-214ENST00000476932 ARL16Q0P5N6 197 aa17.77■□□□□ 0.43
LIMS2-214ENST00000476932 HAPLN4Q86UW8 402 aa17.77■□□□□ 0.43
LIMS2-214ENST00000476932 RNASE11Q8TAA1 199 aaKnown RBP17.77■□□□□ 0.43
LIMS2-214ENST00000476932 SYNGR2O43760 224 aa17.76■□□□□ 0.43
LIMS2-214ENST00000476932 ACAA1P09110 424 aaPredicted RBP17.76■□□□□ 0.43
LIMS2-214ENST00000476932 THNSL2Q86YJ6 484 aa17.76■□□□□ 0.43
LIMS2-214ENST00000476932 MALSU1Q96EH3 234 aa17.76■□□□□ 0.43
LIMS2-214ENST00000476932 CDH20Q9HBT6 801 aa17.76■□□□□ 0.43
LIMS2-214ENST00000476932 KCNS2Q9ULS6 477 aa17.76■□□□□ 0.43
LIMS2-214ENST00000476932 IQCF6A8MYZ5 107 aa17.75■□□□□ 0.43
LIMS2-214ENST00000476932 H0YL77 283 aa17.75■□□□□ 0.43
LIMS2-214ENST00000476932 H3BQ15 152 aa17.75■□□□□ 0.43
LIMS2-214ENST00000476932 UBE2CO00762 179 aa17.75■□□□□ 0.43
LIMS2-214ENST00000476932 NXPH2O95156 264 aa17.75■□□□□ 0.43
LIMS2-214ENST00000476932 FBP1P09467 338 aa17.75■□□□□ 0.43
LIMS2-214ENST00000476932 IAPPP10997 89 aa17.75■□□□□ 0.43
LIMS2-214ENST00000476932 EIF2S3LQ2VIR3 472 aaKnown RBP17.75■□□□□ 0.43
LIMS2-214ENST00000476932 DRAM1Q8N682 238 aa17.75■□□□□ 0.43
LIMS2-214ENST00000476932 LIN7CQ9NUP9 197 aaKnown RBP17.75■□□□□ 0.43
LIMS2-214ENST00000476932 CLCF1Q9UBD9 225 aa17.75■□□□□ 0.43
LIMS2-214ENST00000476932 LYZL6O75951 148 aa17.75■□□□□ 0.43
LIMS2-214ENST00000476932 HSPB1P04792 205 aaKnown RBP17.75■□□□□ 0.43
LIMS2-214ENST00000476932 RAC2P15153 192 aa17.75■□□□□ 0.43
LIMS2-214ENST00000476932 CEBPDP49716 269 aaPredicted RBP17.75■□□□□ 0.43
LIMS2-214ENST00000476932 PSG7Q13046 419 aa17.75■□□□□ 0.43
LIMS2-214ENST00000476932 GCNT2Q8N0V5 402 aa17.75■□□□□ 0.43
LIMS2-214ENST00000476932 CYB561D1Q8N8Q1 229 aa17.75■□□□□ 0.43
LIMS2-214ENST00000476932 PRRC2CQ9Y520 2896 aaKnown RBP17.75■□□□□ 0.43
LIMS2-214ENST00000476932 TLE4Q04727 773 aa17.74■□□□□ 0.43
LIMS2-214ENST00000476932 ZNF525Q8N782 197 aa17.74■□□□□ 0.43
LIMS2-214ENST00000476932 TMEM178AQ8NBL3 297 aa17.74■□□□□ 0.43
LIMS2-214ENST00000476932 RAB39BQ96DA2 213 aa17.74■□□□□ 0.43
LIMS2-214ENST00000476932 RSG1Q9BU20 258 aa17.74■□□□□ 0.43
LIMS2-214ENST00000476932 HES4Q9HCC6 221 aa17.74■□□□□ 0.43
LIMS2-214ENST00000476932 PRR14LQ5THK1 2151 aa17.74■□□□□ 0.43
LIMS2-214ENST00000476932 CHD3Q12873 2000 aaKnown RBP17.74■□□□□ 0.43
LIMS2-214ENST00000476932 TRAV1-1A0A0B4J248 108 aa17.74■□□□□ 0.43
LIMS2-214ENST00000476932 WDR1O75083 606 aa17.74■□□□□ 0.43
LIMS2-214ENST00000476932 MPV17P39210 176 aa17.74■□□□□ 0.43
LIMS2-214ENST00000476932 MRPL49Q13405 166 aaKnown RBP17.74■□□□□ 0.43
LIMS2-214ENST00000476932 GABRA6Q16445 453 aa17.74■□□□□ 0.43
LIMS2-214ENST00000476932 RBMXL1Q96E39 390 aaKnown RBP17.74■□□□□ 0.43
LIMS2-214ENST00000476932 C1QTNF9BB2RNN3 333 aa17.73■□□□□ 0.43
LIMS2-214ENST00000476932 SH2D1BO14796 132 aa17.73■□□□□ 0.43
LIMS2-214ENST00000476932 PSPNO60542 156 aa17.73■□□□□ 0.43
LIMS2-214ENST00000476932 IFNA5P01569 189 aa17.73■□□□□ 0.43
LIMS2-214ENST00000476932 METTL15P1P0C7V9 234 aa17.73■□□□□ 0.43
LIMS2-214ENST00000476932 ZNF16P17020 682 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms