RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 EGR2P11161 476 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-213ENST00000476777 RBM11P57052 281 aaKnown RBP8.67□□□□□ -1.02
BRCA1-213ENST00000476777 RAB40BQ12829 278 aa8.67□□□□□ -1.02
BRCA1-213ENST00000476777 LRRC36Q1X8D7 754 aa8.67□□□□□ -1.02
BRCA1-213ENST00000476777 NHLRC3Q5JS37 347 aa8.67□□□□□ -1.02
BRCA1-213ENST00000476777 STEAP3Q658P3 488 aa8.67□□□□□ -1.02
BRCA1-213ENST00000476777 ZNF529Q6P280 563 aa8.67□□□□□ -1.02
BRCA1-213ENST00000476777 IL34Q6ZMJ4 242 aa8.67□□□□□ -1.02
BRCA1-213ENST00000476777 LINC00322Q6ZN03 302 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-213ENST00000476777 ZNF497Q6ZNH5 498 aa8.67□□□□□ -1.02
BRCA1-213ENST00000476777 SATL1Q86VE3 508 aa8.67□□□□□ -1.02
BRCA1-213ENST00000476777 TCTEX1D1Q8N7M0 179 aa8.67□□□□□ -1.02
BRCA1-213ENST00000476777 RHOVQ96L33 236 aa8.67□□□□□ -1.02
BRCA1-213ENST00000476777 CST11Q9H112 138 aa8.67□□□□□ -1.02
BRCA1-213ENST00000476777 ERGIC3Q9Y282 383 aa8.67□□□□□ -1.02
BRCA1-213ENST00000476777 NUBP2Q9Y5Y2 271 aa8.67□□□□□ -1.02
BRCA1-213ENST00000476777 H0Y980 276 aa8.66□□□□□ -1.02
BRCA1-213ENST00000476777 J3QRE1 110 aa8.66□□□□□ -1.02
BRCA1-213ENST00000476777 AIPO00170 330 aa8.66□□□□□ -1.02
BRCA1-213ENST00000476777 GEMIN2O14893 280 aaKnown RBP8.66□□□□□ -1.02
BRCA1-213ENST00000476777 SLC25A17O43808 307 aa8.66□□□□□ -1.02
BRCA1-213ENST00000476777 RGS11O94810 467 aa8.66□□□□□ -1.02
BRCA1-213ENST00000476777 NDUFA3O95167 84 aa8.66□□□□□ -1.02
BRCA1-213ENST00000476777 CDRT1O95170 752 aa8.66□□□□□ -1.02
BRCA1-213ENST00000476777 CX3CL1P78423 397 aa8.66□□□□□ -1.02
BRCA1-213ENST00000476777 ALKBH1Q13686 389 aaKnown RBP8.66□□□□□ -1.02
BRCA1-213ENST00000476777 ZNF660Q6AZW8 331 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-213ENST00000476777 KDM4DQ6B0I6 523 aa8.66□□□□□ -1.02
BRCA1-213ENST00000476777 PYHIN1Q6K0P9 492 aa8.66□□□□□ -1.02
BRCA1-213ENST00000476777 GTSCR1Q86UQ5 136 aa8.66□□□□□ -1.02
BRCA1-213ENST00000476777 SPATA24Q86W54 205 aa8.66□□□□□ -1.02
BRCA1-213ENST00000476777 OR51A2Q8NGJ7 313 aa8.66□□□□□ -1.02
BRCA1-213ENST00000476777 OR8J1Q8NGP2 316 aa8.66□□□□□ -1.02
BRCA1-213ENST00000476777 OR1L1Q8NH94 360 aa8.66□□□□□ -1.02
BRCA1-213ENST00000476777 PELI1Q96FA3 418 aa8.66□□□□□ -1.02
BRCA1-213ENST00000476777 CPNE2Q96FN4 548 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-213ENST00000476777 GPER1Q99527 375 aa8.66□□□□□ -1.02
BRCA1-213ENST00000476777 NABP2Q9BQ15 211 aa8.66□□□□□ -1.02
BRCA1-213ENST00000476777 MRPL20Q9BYC9 149 aaKnown RBP8.66□□□□□ -1.02
BRCA1-213ENST00000476777 FAM192AQ9GZU8 254 aa8.66□□□□□ -1.02
BRCA1-213ENST00000476777 MED4Q9NPJ6 270 aa8.66□□□□□ -1.02
BRCA1-213ENST00000476777 CEPT1Q9Y6K0 416 aa8.66□□□□□ -1.02
BRCA1-213ENST00000476777 A3GALT2U3KPV4 340 aa8.66□□□□□ -1.02
BRCA1-213ENST00000476777 TCRBV3S1A0A5B6 114 aa8.65□□□□□ -1.02
BRCA1-213ENST00000476777 SPINT2O43291 252 aa8.65□□□□□ -1.02
BRCA1-213ENST00000476777 LY6G6CO95867 125 aa8.65□□□□□ -1.02
BRCA1-213ENST00000476777 HBZP02008 142 aa8.65□□□□□ -1.02
BRCA1-213ENST00000476777 CSTBP04080 98 aaKnown RBP8.65□□□□□ -1.02
BRCA1-213ENST00000476777 T-ENOLP0DO92 83 aa8.65□□□□□ -1.02
BRCA1-213ENST00000476777 RAB3AP20336 220 aa8.65□□□□□ -1.02
BRCA1-213ENST00000476777 POLR2IP36954 125 aaKnown RBP8.65□□□□□ -1.02
BRCA1-213ENST00000476777 TPPP2P59282 170 aa8.65□□□□□ -1.02
BRCA1-213ENST00000476777 KLF5Q13887 457 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-213ENST00000476777 TMEM30BQ3MIR4 351 aa8.65□□□□□ -1.02
BRCA1-213ENST00000476777 ATAD3CQ5T2N8 411 aa8.65□□□□□ -1.02
BRCA1-213ENST00000476777 SYT6Q5T7P8 510 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-213ENST00000476777 RNLSQ5VYX0 342 aa8.65□□□□□ -1.02
BRCA1-213ENST00000476777 CD200R1LQ6Q8B3 271 aa8.65□□□□□ -1.02
BRCA1-213ENST00000476777 LINC00596Q86U02 117 aa8.65□□□□□ -1.02
BRCA1-213ENST00000476777 ODF3L1Q8IXM7 274 aa8.65□□□□□ -1.02
BRCA1-213ENST00000476777 OR52N1Q8NH53 320 aa8.65□□□□□ -1.02
BRCA1-213ENST00000476777 DDB2Q92466 427 aa8.65□□□□□ -1.02
BRCA1-213ENST00000476777 RFKQ969G6 155 aa8.65□□□□□ -1.02
BRCA1-213ENST00000476777 C4orf36Q96KX1 117 aa8.65□□□□□ -1.02
BRCA1-213ENST00000476777 MS4A10Q96PG2 267 aa8.65□□□□□ -1.02
BRCA1-213ENST00000476777 THTPAQ9BU02 230 aa8.65□□□□□ -1.02
BRCA1-213ENST00000476777 RIBC2Q9H4K1 309 aa8.65□□□□□ -1.02
BRCA1-213ENST00000476777 IL36GQ9NZH8 169 aa8.65□□□□□ -1.02
BRCA1-213ENST00000476777 DAPL1A0PJW8 107 aa8.64□□□□□ -1.03
BRCA1-213ENST00000476777 J3QL48 77 aa8.64□□□□□ -1.03
BRCA1-213ENST00000476777 J3QLW9 94 aa8.64□□□□□ -1.03
BRCA1-213ENST00000476777 FCN1O00602 326 aa8.64□□□□□ -1.03
BRCA1-213ENST00000476777 MAGEB3O15480 346 aa8.64□□□□□ -1.03
BRCA1-213ENST00000476777 BRI3O95415 125 aa8.64□□□□□ -1.03
BRCA1-213ENST00000476777 ZNF19P17023 458 aa8.64□□□□□ -1.03
BRCA1-213ENST00000476777 ZP3P21754 424 aa8.64□□□□□ -1.03
BRCA1-213ENST00000476777 CALB2P22676 271 aa8.64□□□□□ -1.03
BRCA1-213ENST00000476777 TMEM267Q0VDI3 215 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-213ENST00000476777 FLOT2Q14254 428 aa8.64□□□□□ -1.03
BRCA1-213ENST00000476777 MPV17LQ2QL34 196 aa8.64□□□□□ -1.03
BRCA1-213ENST00000476777 MORN2Q502X0 79 aa8.64□□□□□ -1.03
BRCA1-213ENST00000476777 ACTBL2Q562R1 376 aa8.64□□□□□ -1.03
BRCA1-213ENST00000476777 PRR18Q8N4B5 295 aa8.64□□□□□ -1.03
BRCA1-213ENST00000476777 OR9G4Q8NGQ1 327 aa8.64□□□□□ -1.03
BRCA1-213ENST00000476777 NEK7Q8TDX7 302 aa8.64□□□□□ -1.03
BRCA1-213ENST00000476777 METTL9Q9H1A3 318 aa8.64□□□□□ -1.03
BRCA1-213ENST00000476777 FBXL15Q9H469 300 aa8.64□□□□□ -1.03
BRCA1-213ENST00000476777 RANGRFQ9HD47 186 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-213ENST00000476777 RAB9BQ9NP90 201 aa8.64□□□□□ -1.03
BRCA1-213ENST00000476777 CNOT2Q9NZN8 540 aaKnown RBP8.64□□□□□ -1.03
BRCA1-213ENST00000476777 TRAPPC2LQ9UL33 140 aa8.64□□□□□ -1.03
BRCA1-213ENST00000476777 ING4Q9UNL4 249 aa8.64□□□□□ -1.03
BRCA1-213ENST00000476777 DHDHQ9UQ10 334 aa8.64□□□□□ -1.03
BRCA1-213ENST00000476777 GAB2Q9UQC2 676 aa8.64□□□□□ -1.03
BRCA1-213ENST00000476777 SHISA3A0PJX4 238 aa8.63□□□□□ -1.03
BRCA1-213ENST00000476777 IZUMO1RA6ND01 250 aa8.63□□□□□ -1.03
BRCA1-213ENST00000476777 G3V2T6 193 aa8.63□□□□□ -1.03
BRCA1-213ENST00000476777 RRHO14718 337 aa8.63□□□□□ -1.03
BRCA1-213ENST00000476777 RCC1P18754 421 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-213ENST00000476777 OR3A3P47888 321 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms