RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 ADAM30Q9UKF2 790 aa9.2□□□□□ -0.94
HDAC6-219ENST00000476625 EXOGQ9Y2C4 368 aaKnown RBP9.2□□□□□ -0.94
HDAC6-219ENST00000476625 FCN1O00602 326 aa9.19□□□□□ -0.94
HDAC6-219ENST00000476625 RPSAP08865 295 aaKnown RBP9.19□□□□□ -0.94
HDAC6-219ENST00000476625 GZMHP20718 246 aa9.19□□□□□ -0.94
HDAC6-219ENST00000476625 ZNF137PP52743 207 aa9.19□□□□□ -0.94
HDAC6-219ENST00000476625 TMED1Q13445 227 aa9.19□□□□□ -0.94
HDAC6-219ENST00000476625 SYT6Q5T7P8 510 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-219ENST00000476625 DDI2Q5TDH0 399 aa9.19□□□□□ -0.94
HDAC6-219ENST00000476625 ACBD7Q8N6N7 88 aa9.19□□□□□ -0.94
HDAC6-219ENST00000476625 OR52M1Q8NGK5 317 aa9.19□□□□□ -0.94
HDAC6-219ENST00000476625 RFKQ969G6 155 aa9.19□□□□□ -0.94
HDAC6-219ENST00000476625 NABP2Q9BQ15 211 aa9.19□□□□□ -0.94
HDAC6-219ENST00000476625 RSRP1Q9BUV0 290 aa9.19□□□□□ -0.94
HDAC6-219ENST00000476625 JAM3Q9BX67 310 aa9.19□□□□□ -0.94
HDAC6-219ENST00000476625 C19orf73Q9NVV2 129 aa9.19□□□□□ -0.94
HDAC6-219ENST00000476625 LDLRAD4O15165 306 aa9.18□□□□□ -0.94
HDAC6-219ENST00000476625 ORC5O43913 435 aa9.18□□□□□ -0.94
HDAC6-219ENST00000476625 HLA-DRB1P01911 266 aa9.18□□□□□ -0.94
HDAC6-219ENST00000476625 LGALS1P09382 135 aaKnown RBP9.18□□□□□ -0.94
HDAC6-219ENST00000476625 EGR2P11161 476 aaPredicted RBP9.18□□□□□ -0.94
HDAC6-219ENST00000476625 FASP25445 335 aa9.18□□□□□ -0.94
HDAC6-219ENST00000476625 PPP1CCP36873 323 aaKnown RBP9.18□□□□□ -0.94
HDAC6-219ENST00000476625 KCNJ3P48549 501 aa9.18□□□□□ -0.94
HDAC6-219ENST00000476625 GALEQ14376 348 aa9.18□□□□□ -0.94
HDAC6-219ENST00000476625 DNAL1Q4LDG9 190 aa9.18□□□□□ -0.94
HDAC6-219ENST00000476625 SLC22A6Q4U2R8 563 aa9.18□□□□□ -0.94
HDAC6-219ENST00000476625 GLDNQ6ZMI3 551 aaPredicted RBP9.18□□□□□ -0.94
HDAC6-219ENST00000476625 KCTD20Q7Z5Y7 419 aa9.18□□□□□ -0.94
HDAC6-219ENST00000476625 C8orf31Q8N9H6 132 aa9.18□□□□□ -0.94
HDAC6-219ENST00000476625 MINDY2Q8NBR6 621 aa9.18□□□□□ -0.94
HDAC6-219ENST00000476625 OR8H1Q8NGG4 311 aa9.18□□□□□ -0.94
HDAC6-219ENST00000476625 OR6Q1Q8NGQ2 317 aa9.18□□□□□ -0.94
HDAC6-219ENST00000476625 METTL9Q9H1A3 318 aa9.18□□□□□ -0.94
HDAC6-219ENST00000476625 FBXL15Q9H469 300 aa9.18□□□□□ -0.94
HDAC6-219ENST00000476625 IFT22Q9H7X7 185 aa9.18□□□□□ -0.94
HDAC6-219ENST00000476625 IMPAD1Q9NX62 359 aa9.18□□□□□ -0.94
HDAC6-219ENST00000476625 ERVK13-1Q9NX77 482 aa9.18□□□□□ -0.94
HDAC6-219ENST00000476625 ZNF580Q9UK33 172 aa9.18□□□□□ -0.94
HDAC6-219ENST00000476625 TRAPPC2LQ9UL33 140 aa9.18□□□□□ -0.94
HDAC6-219ENST00000476625 AP4S1Q9Y587 144 aa9.18□□□□□ -0.94
HDAC6-219ENST00000476625 UBE2QL1A1L167 161 aa9.17□□□□□ -0.94
HDAC6-219ENST00000476625 TMEM212A6NML5 194 aa9.17□□□□□ -0.94
HDAC6-219ENST00000476625 NBR2O15453 112 aa9.17□□□□□ -0.94
HDAC6-219ENST00000476625 OR5H8P0DN80 308 aa9.17□□□□□ -0.94
HDAC6-219ENST00000476625 ARSBP15848 533 aa9.17□□□□□ -0.94
HDAC6-219ENST00000476625 HOXB6P17509 224 aaKnown RBP9.17□□□□□ -0.94
HDAC6-219ENST00000476625 PITPNAQ00169 270 aa9.17□□□□□ -0.94
HDAC6-219ENST00000476625 HAGHQ16775 308 aa9.17□□□□□ -0.94
HDAC6-219ENST00000476625 C5orf64Q2M2E5 130 aa9.17□□□□□ -0.94
HDAC6-219ENST00000476625 CLCC1Q96S66 551 aa9.17□□□□□ -0.94
HDAC6-219ENST00000476625 BANF2Q9H503 90 aa9.17□□□□□ -0.94
HDAC6-219ENST00000476625 ETAA1Q9NY74 926 aa9.17□□□□□ -0.94
HDAC6-219ENST00000476625 SAA2-SAA4A0A096LPE2 208 aa9.16□□□□□ -0.94
HDAC6-219ENST00000476625 MAGEB3O15480 346 aa9.16□□□□□ -0.94
HDAC6-219ENST00000476625 LANCL1O43813 399 aa9.16□□□□□ -0.94
HDAC6-219ENST00000476625 CSTBP04080 98 aaKnown RBP9.16□□□□□ -0.94
HDAC6-219ENST00000476625 OR8U9P0C7N5 309 aa9.16□□□□□ -0.94
HDAC6-219ENST00000476625 SAA2P0DJI9 122 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-219ENST00000476625 GABRB1P18505 474 aa9.16□□□□□ -0.94
HDAC6-219ENST00000476625 ZNF93P35789 620 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-219ENST00000476625 MORN2Q502X0 79 aa9.16□□□□□ -0.94
HDAC6-219ENST00000476625 NHLRC3Q5JS37 347 aa9.16□□□□□ -0.94
HDAC6-219ENST00000476625 LIN54Q6MZP7 749 aa9.16□□□□□ -0.94
HDAC6-219ENST00000476625 FAM131AQ6UXB0 335 aa9.16□□□□□ -0.94
HDAC6-219ENST00000476625 OR52I1Q8NGK6 324 aa9.16□□□□□ -0.94
HDAC6-219ENST00000476625 ABHD5Q8WTS1 349 aa9.16□□□□□ -0.94
HDAC6-219ENST00000476625 MUL1Q969V5 352 aa9.16□□□□□ -0.94
HDAC6-219ENST00000476625 TMEM106AQ96A25 262 aa9.16□□□□□ -0.94
HDAC6-219ENST00000476625 ZNF251Q9BRH9 671 aa9.16□□□□□ -0.94
HDAC6-219ENST00000476625 ABHD14AQ9BUJ0 271 aa9.16□□□□□ -0.94
HDAC6-219ENST00000476625 PARP12Q9H0J9 701 aaKnown RBP9.16□□□□□ -0.94
HDAC6-219ENST00000476625 OR2S2Q9NQN1 319 aa9.16□□□□□ -0.94
HDAC6-219ENST00000476625 IL36GQ9NZH8 169 aa9.16□□□□□ -0.94
HDAC6-219ENST00000476625 TRAV8-7A0A075B6U6 113 aa9.15□□□□□ -0.94
HDAC6-219ENST00000476625 IZUMO1RA6ND01 250 aa9.15□□□□□ -0.94
HDAC6-219ENST00000476625 EI24O14681 340 aa9.15□□□□□ -0.94
HDAC6-219ENST00000476625 ST8SIA5O15466 376 aa9.15□□□□□ -0.94
HDAC6-219ENST00000476625 SPINT2O43291 252 aa9.15□□□□□ -0.94
HDAC6-219ENST00000476625 TXNL1O43396 289 aa9.15□□□□□ -0.94
HDAC6-219ENST00000476625 LALBAP00709 142 aa9.15□□□□□ -0.94
HDAC6-219ENST00000476625 IGLV1-51P01701 117 aa9.15□□□□□ -0.94
HDAC6-219ENST00000476625 TPPP2P59282 170 aa9.15□□□□□ -0.94
HDAC6-219ENST00000476625 SNRPGP62308 76 aaKnown RBP9.15□□□□□ -0.94
HDAC6-219ENST00000476625 CX3CL1P78423 397 aa9.15□□□□□ -0.94
HDAC6-219ENST00000476625 MPV17LQ2QL34 196 aa9.15□□□□□ -0.94
HDAC6-219ENST00000476625 RPL39P5Q59GN2 51 aa9.15□□□□□ -0.94
HDAC6-219ENST00000476625 OR2G6Q5TZ20 316 aa9.15□□□□□ -0.94
HDAC6-219ENST00000476625 SIGIRRQ6IA17 410 aa9.15□□□□□ -0.94
HDAC6-219ENST00000476625 RAB12Q6IQ22 244 aa9.15□□□□□ -0.94
HDAC6-219ENST00000476625 SYS1Q8N2H4 156 aa9.15□□□□□ -0.94
HDAC6-219ENST00000476625 ZFP41Q8N8Y5 198 aa9.15□□□□□ -0.94
HDAC6-219ENST00000476625 OR4C12Q96R67 309 aa9.15□□□□□ -0.94
HDAC6-219ENST00000476625 ZNF184Q99676 751 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-219ENST00000476625 TAF9BQ9HBM6 251 aa9.15□□□□□ -0.94
HDAC6-219ENST00000476625 RCC2Q9P258 522 aaKnown RBP9.15□□□□□ -0.94
HDAC6-219ENST00000476625 ENOPH1Q9UHY7 261 aa9.15□□□□□ -0.94
HDAC6-219ENST00000476625 FOXA2Q9Y261 457 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-219ENST00000476625 A0A1W2PPK0 400 aa9.14□□□□□ -0.95
HDAC6-219ENST00000476625 ANKRD34BA5PLL1 514 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms