RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 C6orf201Q7Z4U5 140 aa8.9□□□□□ -0.98
CKS1B-206ENST00000474215 LYG1Q8N1E2 194 aa8.9□□□□□ -0.98
CKS1B-206ENST00000474215 ZNF439Q8NDP4 499 aa8.9□□□□□ -0.98
CKS1B-206ENST00000474215 CT45A3Q8NHU0 189 aa8.9□□□□□ -0.98
CKS1B-206ENST00000474215 MRPL30Q8TCC3 161 aaKnown RBP8.9□□□□□ -0.98
CKS1B-206ENST00000474215 RTN4IP1Q8WWV3 396 aaPredicted RBP8.9□□□□□ -0.98
CKS1B-206ENST00000474215 CYYR1Q96J86 154 aa8.9□□□□□ -0.98
CKS1B-206ENST00000474215 GFI1Q99684 422 aa8.9□□□□□ -0.98
CKS1B-206ENST00000474215 SULT4A1Q9BR01 284 aa8.9□□□□□ -0.98
CKS1B-206ENST00000474215 TM2D1Q9BX74 207 aa8.9□□□□□ -0.98
CKS1B-206ENST00000474215 KRTAP3-3Q9BYR6 98 aa8.9□□□□□ -0.98
CKS1B-206ENST00000474215 KRTAP3-2Q9BYR7 98 aa8.9□□□□□ -0.98
CKS1B-206ENST00000474215 PLGRKTQ9HBL7 147 aa8.9□□□□□ -0.98
CKS1B-206ENST00000474215 OR2S2Q9NQN1 319 aa8.9□□□□□ -0.98
CKS1B-206ENST00000474215 LRRC42Q9Y546 428 aa8.9□□□□□ -0.98
CKS1B-206ENST00000474215 TET2Q6N021 2002 aaPredicted RBP8.89□□□□□ -0.99
CKS1B-206ENST00000474215 ADARB2-AS1A8MUL3 147 aa8.89□□□□□ -0.99
CKS1B-206ENST00000474215 SLC17A2O00624 439 aa8.89□□□□□ -0.99
CKS1B-206ENST00000474215 SLC31A2O15432 143 aa8.89□□□□□ -0.99
CKS1B-206ENST00000474215 IGKV1D-33P01593 117 aa8.89□□□□□ -0.99
CKS1B-206ENST00000474215 IGKV1-33P01594 117 aa8.89□□□□□ -0.99
CKS1B-206ENST00000474215 ARSBP15848 533 aa8.89□□□□□ -0.99
CKS1B-206ENST00000474215 CALRP27797 417 aaKnown RBP8.89□□□□□ -0.99
CKS1B-206ENST00000474215 BLVRBP30043 206 aaPredicted RBP8.89□□□□□ -0.99
CKS1B-206ENST00000474215 HTD2P86397 168 aa8.89□□□□□ -0.99
CKS1B-206ENST00000474215 CD83Q01151 205 aa8.89□□□□□ -0.99
CKS1B-206ENST00000474215 EBI3Q14213 229 aa8.89□□□□□ -0.99
CKS1B-206ENST00000474215 P2RY14Q15391 338 aa8.89□□□□□ -0.99
CKS1B-206ENST00000474215 MORN2Q502X0 79 aa8.89□□□□□ -0.99
CKS1B-206ENST00000474215 ZNF367Q7RTV3 350 aa8.89□□□□□ -0.99
CKS1B-206ENST00000474215 OR2W3Q7Z3T1 314 aa8.89□□□□□ -0.99
CKS1B-206ENST00000474215 OR10V1Q8NGI7 309 aa8.89□□□□□ -0.99
CKS1B-206ENST00000474215 NICN1Q9BSH3 213 aa8.89□□□□□ -0.99
CKS1B-206ENST00000474215 KCNK15Q9H427 330 aa8.89□□□□□ -0.99
CKS1B-206ENST00000474215 AK6Q9Y3D8 172 aaKnown RBP8.89□□□□□ -0.99
CKS1B-206ENST00000474215 WNK1Q9H4A3 2382 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 IGHV3-72A0A0B4J1Y9 119 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 FGF16O43320 207 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 TXNL1O43396 289 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 MRPS14O60783 128 aaKnown RBP8.88□□□□□ -0.99
CKS1B-206ENST00000474215 NAPSAO96009 420 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 CD1BP29016 333 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 RANBP1P43487 201 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 PSMD7P51665 324 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 ZNF137PP52743 207 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 RAB11BQ15907 218 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 SSX1Q16384 188 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 TCTEX1D4Q5JR98 221 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 C5orf24Q7Z6I8 188 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 TGIF2LXQ8IUE1 241 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 IZUMO1Q8IYV9 350 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 FAM89BQ8N5H3 189 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 C5orf56Q8N8D9 126 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 OR4F17Q8NGA8 305 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 OR52L2PQ8NGH6 319 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 OR2T10Q8NGZ9 312 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 GALMQ96C23 342 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 R3HDM4Q96D70 268 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 EAF1Q96JC9 268 aaPredicted RBP8.88□□□□□ -0.99
CKS1B-206ENST00000474215 OR4F4Q96R69 305 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 URM1Q9BTM9 101 aaKnown RBP8.88□□□□□ -0.99
CKS1B-206ENST00000474215 LPAR5Q9H1C0 372 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 PLEKHJ1Q9NW61 149 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 ABRACLQ9P1F3 81 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 JPT1Q9UK76 154 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 V9GY05 133 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 NOTCH1P46531 2555 aa8.88□□□□□ -0.99
CKS1B-206ENST00000474215 A0A0A6YYD4 124 aa8.87□□□□□ -0.99
CKS1B-206ENST00000474215 TCRBV4S1A1TA0A5B7 111 aa8.87□□□□□ -0.99
CKS1B-206ENST00000474215 NCBP2LA6PVI3 153 aaKnown RBP8.87□□□□□ -0.99
CKS1B-206ENST00000474215 SOCS1O15524 211 aa8.87□□□□□ -0.99
CKS1B-206ENST00000474215 DENRO43583 198 aaKnown RBP8.87□□□□□ -0.99
CKS1B-206ENST00000474215 LANCL1O43813 399 aa8.87□□□□□ -0.99
CKS1B-206ENST00000474215 YPEL1O60688 119 aa8.87□□□□□ -0.99
CKS1B-206ENST00000474215 MOSP00540 346 aa8.87□□□□□ -0.99
CKS1B-206ENST00000474215 PPP1CCP36873 323 aaKnown RBP8.87□□□□□ -0.99
CKS1B-206ENST00000474215 GABARAPL2P60520 117 aa8.87□□□□□ -0.99
CKS1B-206ENST00000474215 GNMTQ14749 295 aa8.87□□□□□ -0.99
CKS1B-206ENST00000474215 HMGN3Q15651 99 aa8.87□□□□□ -0.99
CKS1B-206ENST00000474215 C2orf76Q3KRA6 126 aa8.87□□□□□ -0.99
CKS1B-206ENST00000474215 LY6G6FQ5SQ64 297 aa8.87□□□□□ -0.99
CKS1B-206ENST00000474215 CD200R1LQ6Q8B3 271 aa8.87□□□□□ -0.99
CKS1B-206ENST00000474215 Q8N6K4 173 aa8.87□□□□□ -0.99
CKS1B-206ENST00000474215 OR51D1Q8NGF3 324 aa8.87□□□□□ -0.99
CKS1B-206ENST00000474215 FAM3DQ96BQ1 224 aa8.87□□□□□ -0.99
CKS1B-206ENST00000474215 YPEL2Q96QA6 119 aa8.87□□□□□ -0.99
CKS1B-206ENST00000474215 RIMS4Q9H426 269 aaPredicted RBP8.87□□□□□ -0.99
CKS1B-206ENST00000474215 Q9H521 79 aa8.87□□□□□ -0.99
CKS1B-206ENST00000474215 CHMP1AQ9HD42 196 aaPredicted RBP8.87□□□□□ -0.99
CKS1B-206ENST00000474215 NDUFB11Q9NX14 153 aa8.87□□□□□ -0.99
CKS1B-206ENST00000474215 HSF4Q9ULV5 492 aa8.87□□□□□ -0.99
CKS1B-206ENST00000474215 TRAV1-2A0A0B4J238 106 aa8.86□□□□□ -0.99
CKS1B-206ENST00000474215 A0A1W2PRX2 142 aa8.86□□□□□ -0.99
CKS1B-206ENST00000474215 ZNF736B4DX44 427 aaPredicted RBP8.86□□□□□ -0.99
CKS1B-206ENST00000474215 PDCD5O14737 125 aa8.86□□□□□ -0.99
CKS1B-206ENST00000474215 RGS11O94810 467 aa8.86□□□□□ -0.99
CKS1B-206ENST00000474215 CLDN12P56749 244 aa8.86□□□□□ -0.99
CKS1B-206ENST00000474215 PDLIM3Q53GG5 364 aaPredicted RBP8.86□□□□□ -0.99
CKS1B-206ENST00000474215 ZNF880Q6PDB4 577 aa8.86□□□□□ -0.99
CKS1B-206ENST00000474215 C10orf99Q6UWK7 81 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms