RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 TOR1AO14656 332 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 SSNA1O43805 119 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 CREBL2O60519 120 aaPredicted RBP8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 ZNF735P0CB33 412 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 IGHV3-43DP0DP04 118 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 AKR1C4P17516 323 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 USF1P22415 310 aaPredicted RBP8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 OMGP23515 440 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 VAMP1P23763 118 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 IL3RAP26951 378 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 PPP1CCP36873 323 aaKnown RBP8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 GPR12P47775 334 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 KRTAP10-9P60411 292 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 ERVFRD-1P60508 538 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 LCN2P80188 198 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 BAMBIQ13145 260 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 CBX3Q13185 183 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 ZNF273Q14593 569 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 CR1LQ2VPA4 569 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 PRAMEF5Q5TYX0 476 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 DHRS11Q6UWP2 260 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 HEPN1Q6WQI6 88 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 GLCCI1Q86VQ1 547 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 SGPP2Q8IWX5 399 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 H1FOOQ8IZA3 346 aaPredicted RBP8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 OR52L2PQ8NGH6 319 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 OR52M1Q8NGK5 317 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 OR13C8Q8NGS7 320 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 UPRTQ96BW1 309 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 MBD6Q96DN6 1003 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 ZNF486Q96H40 463 aaPredicted RBP8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 KCNIP3Q9Y2W7 256 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 IGHV4-30-2A0A087WSY4 118 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 PIGBOS1A0A0B4J2F0 54 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 OR5H14A6NHG9 310 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 C15orf65H3BRN8 121 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 F2RL2O00254 374 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 GPR31O00270 319 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 HSD17B6O14756 317 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 YPEL1O60688 119 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 HLA-AP01891 365 aaKnown RBP8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 RBP4P02753 201 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 CTSDP07339 412 aaPredicted RBP8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 OR8U9P0C7N5 309 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 SPNP16150 400 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 CCL3L1P16619 93 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 GNG10P50151 68 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 UCP3P55916 312 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 UBE2MP61081 183 aaKnown RBP8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 CATR1Q13166 79 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 HERPUD1Q15011 391 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 TATDN3Q17R31 274 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 Q6ZPA2 131 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 FGFRL1Q8N441 504 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 OR13D1Q8NGV5 346 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 OR10X1Q8NGY0 326 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 OR8U1Q8NH10 309 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 C8orf46Q8TAG6 207 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 YPEL2Q96QA6 119 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 MARVELD1Q9BSK0 173 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 ABHD14AQ9BUJ0 271 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 SUCNR1Q9BXA5 334 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 BEX2Q9BXY8 128 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 FXYD6Q9H0Q3 95 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 OR2D2Q9H210 308 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 BEX1Q9HBH7 125 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 GFOD1Q9NXC2 390 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 AMMECR1Q9Y4X0 333 aaPredicted RBP8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 SESN1Q9Y6P5 492 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 HRNRQ86YZ3 2850 aaPredicted RBP8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 KIAA2026Q5HYC2 2103 aa8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 YLPM1P49750 1951 aaKnown RBP8.48□□□□□ -1.05
PRPF38A-202ENST00000474048 DOCK11Q5JSL3 2073 aa8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 IGKV1-6A0A0C4DH72 117 aa8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 A8MXK9 166 aa8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 M0R1W7 72 aa8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 ANXA7P20073 488 aaKnown RBP8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 PRRX1P54821 245 aa8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 PIGPP57054 158 aa8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 GNMTQ14749 295 aa8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 C17orf58Q2M2W7 97 aa8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 PHLDA2Q53GA4 152 aa8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 TMEM128Q5BJH2 165 aa8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 FAHD2BQ6P2I3 314 aaPredicted RBP8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 PRSS57Q6UWY2 283 aa8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 ZNF841Q6ZN19 808 aa8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 LHFPL1Q86WI0 220 aa8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 KIR3DL3Q8N743 410 aa8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 ZNF645Q8N7E2 425 aa8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 ZBTB34Q8NCN2 500 aa8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 FAHD2AQ96GK7 314 aa8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 AKR1E2Q96JD6 320 aa8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 DMRTB1Q96MA1 342 aa8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 S1PR3Q99500 378 aa8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 GHITMQ9H3K2 345 aa8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 HEXA-AS1Q9H8Q6 139 aa8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 LPAR2Q9HBW0 351 aa8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 LIN7CQ9NUP9 197 aaKnown RBP8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 FLVCR2Q9UPI3 526 aa8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 PSG11Q9UQ72 335 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms