RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 METTL21EPA6NDL7 271 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 HSD17B6O14756 317 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 TIMM23O14925 209 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 RGS11O94810 467 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 VSIG10L2P0DP72 767 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 CD36P16671 472 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 GADD45AP24522 165 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 Q3ZCU0 254 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 MOB1BQ7L9L4 216 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 C8orf31Q8N9H6 132 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 TSPAN14Q8NG11 270 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 OR56B4Q8NH76 319 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 IL1F10Q8WWZ1 152 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 CYYR1Q96J86 154 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 KCTD7Q96MP8 289 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 OR51E2Q9H255 320 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 LIN7BQ9HAP6 207 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 AK3Q9UIJ7 227 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 HSF4Q9ULV5 492 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 SNRNP70P08621 437 aaKnown RBP11.4□□□□□ -0.58
VAMP4-203ENST00000474047 REG1BP48304 166 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 DIAPH2-AS1Q14236 149 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 FAM53AQ6NSI3 398 aaPredicted RBP11.4□□□□□ -0.58
VAMP4-203ENST00000474047 LINC00311Q8N616 119 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 OR52L2PQ8NGH6 319 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 ARHGAP5-AS1Q96IT6 56 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 CITED1Q99966 193 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 CMSS1Q9BQ75 279 aaKnown RBP11.4□□□□□ -0.58
VAMP4-203ENST00000474047 PECRQ9BY49 303 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 JPT1Q9UK76 154 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 NOTOA8MTQ0 251 aa11.39□□□□□ -0.59
VAMP4-203ENST00000474047 OR2F2O95006 317 aa11.39□□□□□ -0.59
VAMP4-203ENST00000474047 EFNB2P52799 333 aa11.39□□□□□ -0.59
VAMP4-203ENST00000474047 BLCAPP62952 87 aa11.39□□□□□ -0.59
VAMP4-203ENST00000474047 HTD2P86397 168 aa11.39□□□□□ -0.59
VAMP4-203ENST00000474047 HABP2Q14520 560 aaPredicted RBP11.39□□□□□ -0.59
VAMP4-203ENST00000474047 HNF4GQ14541 408 aa11.39□□□□□ -0.59
VAMP4-203ENST00000474047 MORN2Q502X0 79 aa11.39□□□□□ -0.59
VAMP4-203ENST00000474047 SLC25A48Q6ZT89 311 aaKnown RBP11.39□□□□□ -0.59
VAMP4-203ENST00000474047 THNSL2Q86YJ6 484 aa11.39□□□□□ -0.59
VAMP4-203ENST00000474047 KLHDC1Q8N7A1 406 aa11.39□□□□□ -0.59
VAMP4-203ENST00000474047 RAB3CQ96E17 227 aa11.39□□□□□ -0.59
VAMP4-203ENST00000474047 RBM14Q96PK6 669 aaKnown RBP11.39□□□□□ -0.59
VAMP4-203ENST00000474047 ZNF702PQ9H963 129 aa11.39□□□□□ -0.59
VAMP4-203ENST00000474047 MGAT4AQ9UM21 535 aa11.39□□□□□ -0.59
VAMP4-203ENST00000474047 A0A075B6Q4 140 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 A0A0B4J203 849 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 A0A1W2PPI3 338 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 M0QZ24 198 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 M0QZK8 103 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 LDLRAD4O15165 306 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 NAPSAO96009 420 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 CD3GP09693 182 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 SLC2A2P11168 524 aaPredicted RBP11.38□□□□□ -0.59
VAMP4-203ENST00000474047 TMEM11P17152 192 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 RAB6AP20340 208 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 PPP1CCP36873 323 aaKnown RBP11.38□□□□□ -0.59
VAMP4-203ENST00000474047 VDAC2P45880 294 aaPredicted RBP11.38□□□□□ -0.59
VAMP4-203ENST00000474047 TMEM50BP56557 158 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 KRTAP10-3P60369 221 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 MXD1Q05195 221 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 ZNF816Q0VGE8 651 aaPredicted RBP11.38□□□□□ -0.59
VAMP4-203ENST00000474047 CT45A1Q5HYN5 189 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 C9orf152Q5JTZ5 239 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 C5orf24Q7Z6I8 188 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 LYG1Q8N1E2 194 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 CT45A3Q8NHU0 189 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 ATG5Q9H1Y0 275 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 ZNF696Q9H7X3 374 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 C12orf4Q9NQ89 552 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 DAPK2Q9UIK4 370 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 IGHV1-3A0A0C4DH29 117 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 SLC31A2O15432 143 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 HSPA12AO43301 675 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 RRP9O43818 475 aaKnown RBP11.38□□□□□ -0.59
VAMP4-203ENST00000474047 IGKV1D-33P01593 117 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 IGKV1-33P01594 117 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 SDC2P34741 201 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 PLA2G7Q13093 441 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 GNMTQ14749 295 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 HERPUD1Q15011 391 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 HMGN3Q15651 99 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 TIMM50Q3ZCQ8 353 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 ABCA11PQ4W5N1 156 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 STEAP3Q658P3 488 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 TGIF2LXQ8IUE1 241 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 OR10R2Q8NGX6 335 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 HDHD3Q9BSH5 251 aaPredicted RBP11.38□□□□□ -0.59
VAMP4-203ENST00000474047 ABHD14AQ9BUJ0 271 aa11.38□□□□□ -0.59
VAMP4-203ENST00000474047 IGHV3-72A0A0B4J1Y9 119 aa11.37□□□□□ -0.59
VAMP4-203ENST00000474047 TXNL1O43396 289 aa11.37□□□□□ -0.59
VAMP4-203ENST00000474047 YPEL1O60688 119 aa11.37□□□□□ -0.59
VAMP4-203ENST00000474047 ZNF134P52741 427 aa11.37□□□□□ -0.59
VAMP4-203ENST00000474047 ARFRP1Q13795 201 aa11.37□□□□□ -0.59
VAMP4-203ENST00000474047 Q8N2B8 174 aa11.37□□□□□ -0.59
VAMP4-203ENST00000474047 ZNF439Q8NDP4 499 aa11.37□□□□□ -0.59
VAMP4-203ENST00000474047 OR2AK2Q8NG84 335 aa11.37□□□□□ -0.59
VAMP4-203ENST00000474047 RTN4IP1Q8WWV3 396 aaPredicted RBP11.37□□□□□ -0.59
VAMP4-203ENST00000474047 YPEL2Q96QA6 119 aa11.37□□□□□ -0.59
VAMP4-203ENST00000474047 MOB4Q9Y3A3 225 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms