RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 SYT6Q5T7P8 510 aaPredicted RBP9.66□□□□□ -0.86
TRAF4-209ENST00000473421 ACBD7Q8N6N7 88 aa9.66□□□□□ -0.86
TRAF4-209ENST00000473421 OR52L2PQ8NGH6 319 aa9.66□□□□□ -0.86
TRAF4-209ENST00000473421 OR6Q1Q8NGQ2 317 aa9.66□□□□□ -0.86
TRAF4-209ENST00000473421 LGALS12Q96DT0 336 aa9.66□□□□□ -0.86
TRAF4-209ENST00000473421 NABP2Q9BQ15 211 aa9.66□□□□□ -0.86
TRAF4-209ENST00000473421 NKX1-2Q9UD57 310 aaPredicted RBP9.66□□□□□ -0.86
TRAF4-209ENST00000473421 EXOGQ9Y2C4 368 aaKnown RBP9.66□□□□□ -0.86
TRAF4-209ENST00000473421 A3GALT2U3KPV4 340 aa9.66□□□□□ -0.86
TRAF4-209ENST00000473421 ERICH4A6NGS2 130 aa9.65□□□□□ -0.86
TRAF4-209ENST00000473421 A8MZ25 164 aa9.65□□□□□ -0.86
TRAF4-209ENST00000473421 AIPO00170 330 aa9.65□□□□□ -0.86
TRAF4-209ENST00000473421 LANCL1O43813 399 aa9.65□□□□□ -0.86
TRAF4-209ENST00000473421 IGLV1-51P01701 117 aa9.65□□□□□ -0.86
TRAF4-209ENST00000473421 HBZP02008 142 aa9.65□□□□□ -0.86
TRAF4-209ENST00000473421 LGALS1P09382 135 aaKnown RBP9.65□□□□□ -0.86
TRAF4-209ENST00000473421 RAB3AP20336 220 aa9.65□□□□□ -0.86
TRAF4-209ENST00000473421 SERPINA2P20848 420 aa9.65□□□□□ -0.86
TRAF4-209ENST00000473421 IL3RAP26951 378 aa9.65□□□□□ -0.86
TRAF4-209ENST00000473421 NHLRC3Q5JS37 347 aa9.65□□□□□ -0.86
TRAF4-209ENST00000473421 IL34Q6ZMJ4 242 aa9.65□□□□□ -0.86
TRAF4-209ENST00000473421 ZDHHC13Q8IUH4 622 aa9.65□□□□□ -0.86
TRAF4-209ENST00000473421 TSEN15Q8WW01 171 aaKnown RBP9.65□□□□□ -0.86
TRAF4-209ENST00000473421 RFKQ969G6 155 aa9.65□□□□□ -0.86
TRAF4-209ENST00000473421 MS4A10Q96PG2 267 aa9.65□□□□□ -0.86
TRAF4-209ENST00000473421 FAM110AQ9BQ89 295 aa9.65□□□□□ -0.86
TRAF4-209ENST00000473421 FAM103A1Q9BTL3 118 aaKnown RBP9.65□□□□□ -0.86
TRAF4-209ENST00000473421 ALG8Q9BVK2 526 aa9.65□□□□□ -0.86
TRAF4-209ENST00000473421 GNG12Q9UBI6 72 aa9.65□□□□□ -0.86
TRAF4-209ENST00000473421 ADAM30Q9UKF2 790 aa9.65□□□□□ -0.86
TRAF4-209ENST00000473421 DHDHQ9UQ10 334 aa9.65□□□□□ -0.86
TRAF4-209ENST00000473421 NBR2O15453 112 aa9.64□□□□□ -0.87
TRAF4-209ENST00000473421 GYG2O15488 501 aa9.64□□□□□ -0.87
TRAF4-209ENST00000473421 OR8U9P0C7N5 309 aa9.64□□□□□ -0.87
TRAF4-209ENST00000473421 PPP1CCP36873 323 aaKnown RBP9.64□□□□□ -0.87
TRAF4-209ENST00000473421 CX3CL1P78423 397 aa9.64□□□□□ -0.87
TRAF4-209ENST00000473421 MORN2Q502X0 79 aa9.64□□□□□ -0.87
TRAF4-209ENST00000473421 LIN54Q6MZP7 749 aa9.64□□□□□ -0.87
TRAF4-209ENST00000473421 CCDC197Q8NCU1 140 aa9.64□□□□□ -0.87
TRAF4-209ENST00000473421 OR5AK2Q8NH90 309 aa9.64□□□□□ -0.87
TRAF4-209ENST00000473421 NEK7Q8TDX7 302 aa9.64□□□□□ -0.87
TRAF4-209ENST00000473421 OR4C12Q96R67 309 aa9.64□□□□□ -0.87
TRAF4-209ENST00000473421 CHCHD6Q9BRQ6 235 aa9.64□□□□□ -0.87
TRAF4-209ENST00000473421 JAM3Q9BX67 310 aa9.64□□□□□ -0.87
TRAF4-209ENST00000473421 FBXL15Q9H469 300 aa9.64□□□□□ -0.87
TRAF4-209ENST00000473421 AMBNQ9NP70 447 aa9.64□□□□□ -0.87
TRAF4-209ENST00000473421 OAZ3Q9UMX2 235 aa9.64□□□□□ -0.87
TRAF4-209ENST00000473421 NUBP2Q9Y5Y2 271 aa9.64□□□□□ -0.87
TRAF4-209ENST00000473421 IZUMO1RA6ND01 250 aa9.63□□□□□ -0.87
TRAF4-209ENST00000473421 SAC3D1A6NKF1 404 aa9.63□□□□□ -0.87
TRAF4-209ENST00000473421 NDUFA3O95167 84 aa9.63□□□□□ -0.87
TRAF4-209ENST00000473421 ARSBP15848 533 aa9.63□□□□□ -0.87
TRAF4-209ENST00000473421 PITPNAQ00169 270 aa9.63□□□□□ -0.87
TRAF4-209ENST00000473421 SLC22A6Q4U2R8 563 aa9.63□□□□□ -0.87
TRAF4-209ENST00000473421 NPBQ8NG41 125 aa9.63□□□□□ -0.87
TRAF4-209ENST00000473421 OR13C5Q8NGS8 318 aa9.63□□□□□ -0.87
TRAF4-209ENST00000473421 SPATA25Q9BR10 227 aa9.63□□□□□ -0.87
TRAF4-209ENST00000473421 ZNF251Q9BRH9 671 aa9.63□□□□□ -0.87
TRAF4-209ENST00000473421 THAP7Q9BT49 309 aaPredicted RBP9.63□□□□□ -0.87
TRAF4-209ENST00000473421 RSRP1Q9BUV0 290 aa9.63□□□□□ -0.87
TRAF4-209ENST00000473421 METTL9Q9H1A3 318 aa9.63□□□□□ -0.87
TRAF4-209ENST00000473421 GHITMQ9H3K2 345 aa9.63□□□□□ -0.87
TRAF4-209ENST00000473421 IL36GQ9NZH8 169 aa9.63□□□□□ -0.87
TRAF4-209ENST00000473421 TRAPPC2LQ9UL33 140 aa9.63□□□□□ -0.87
TRAF4-209ENST00000473421 FOXA2Q9Y261 457 aaPredicted RBP9.63□□□□□ -0.87
TRAF4-209ENST00000473421 PCLOQ9Y6V0 5065 aa9.62□□□□□ -0.87
TRAF4-209ENST00000473421 TMEM212A6NML5 194 aa9.62□□□□□ -0.87
TRAF4-209ENST00000473421 HSPA12AO43301 675 aa9.62□□□□□ -0.87
TRAF4-209ENST00000473421 TXNL1O43396 289 aa9.62□□□□□ -0.87
TRAF4-209ENST00000473421 HSPB1P04792 205 aaKnown RBP9.62□□□□□ -0.87
TRAF4-209ENST00000473421 RPSAP08865 295 aaKnown RBP9.62□□□□□ -0.87
TRAF4-209ENST00000473421 GABRB1P18505 474 aa9.62□□□□□ -0.87
TRAF4-209ENST00000473421 FASP25445 335 aa9.62□□□□□ -0.87
TRAF4-209ENST00000473421 CRIP2P52943 208 aaPredicted RBP9.62□□□□□ -0.87
TRAF4-209ENST00000473421 SNRPGP62308 76 aaKnown RBP9.62□□□□□ -0.87
TRAF4-209ENST00000473421 DEFA5Q01523 94 aa9.62□□□□□ -0.87
TRAF4-209ENST00000473421 ZIK1Q3SY52 487 aaPredicted RBP9.62□□□□□ -0.87
TRAF4-209ENST00000473421 Q3ZCU0 254 aa9.62□□□□□ -0.87
TRAF4-209ENST00000473421 SLC25A30Q5SVS4 291 aa9.62□□□□□ -0.87
TRAF4-209ENST00000473421 SIGIRRQ6IA17 410 aa9.62□□□□□ -0.87
TRAF4-209ENST00000473421 LYPD6Q86Y78 171 aa9.62□□□□□ -0.87
TRAF4-209ENST00000473421 GAPTQ8N292 157 aa9.62□□□□□ -0.87
TRAF4-209ENST00000473421 RHOVQ96L33 236 aa9.62□□□□□ -0.87
TRAF4-209ENST00000473421 PARP12Q9H0J9 701 aaKnown RBP9.62□□□□□ -0.87
TRAF4-209ENST00000473421 TAF9BQ9HBM6 251 aa9.62□□□□□ -0.87
TRAF4-209ENST00000473421 OR2S2Q9NQN1 319 aa9.62□□□□□ -0.87
TRAF4-209ENST00000473421 ERVK13-1Q9NX77 482 aa9.62□□□□□ -0.87
TRAF4-209ENST00000473421 RCC2Q9P258 522 aaKnown RBP9.62□□□□□ -0.87
TRAF4-209ENST00000473421 AP4S1Q9Y587 144 aa9.62□□□□□ -0.87
TRAF4-209ENST00000473421 SPINT2O43291 252 aa9.61□□□□□ -0.87
TRAF4-209ENST00000473421 ZNF93P35789 620 aaPredicted RBP9.61□□□□□ -0.87
TRAF4-209ENST00000473421 LINC00205P59089 165 aa9.61□□□□□ -0.87
TRAF4-209ENST00000473421 MPV17LQ2QL34 196 aa9.61□□□□□ -0.87
TRAF4-209ENST00000473421 DNAL1Q4LDG9 190 aa9.61□□□□□ -0.87
TRAF4-209ENST00000473421 DDI2Q5TDH0 399 aa9.61□□□□□ -0.87
TRAF4-209ENST00000473421 FAM131AQ6UXB0 335 aa9.61□□□□□ -0.87
TRAF4-209ENST00000473421 GLDNQ6ZMI3 551 aaPredicted RBP9.61□□□□□ -0.87
TRAF4-209ENST00000473421 ZNF833PQ6ZTB9 187 aa9.61□□□□□ -0.87
TRAF4-209ENST00000473421 SYS1Q8N2H4 156 aa9.61□□□□□ -0.87
TRAF4-209ENST00000473421 CLCC1Q96S66 551 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms