RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 FGF8P55075 233 aaPredicted RBP17.96■□□□□ 0.47
COL18A1-207ENST00000473212 H1FOOQ8IZA3 346 aaPredicted RBP17.96■□□□□ 0.47
COL18A1-207ENST00000473212 OR10J5Q8NHC4 309 aa17.96■□□□□ 0.47
COL18A1-207ENST00000473212 GPR61Q9BZJ8 451 aa17.96■□□□□ 0.47
COL18A1-207ENST00000473212 CFAP47Q6ZTR5 3102 aa17.95■□□□□ 0.46
COL18A1-207ENST00000473212 A0A1B0GU03 582 aa17.95■□□□□ 0.46
COL18A1-207ENST00000473212 NEURL1O76050 574 aa17.95■□□□□ 0.46
COL18A1-207ENST00000473212 S100GP29377 79 aa17.95■□□□□ 0.46
COL18A1-207ENST00000473212 RNPS1Q15287 305 aaKnown RBP17.95■□□□□ 0.46
COL18A1-207ENST00000473212 SPATA46Q5T0L3 261 aa17.95■□□□□ 0.46
COL18A1-207ENST00000473212 ZNF787Q6DD87 383 aa17.95■□□□□ 0.46
COL18A1-207ENST00000473212 ZNF729A6NN14 1252 aaPredicted RBP17.95■□□□□ 0.46
COL18A1-207ENST00000473212 SEC14L6B5MCN3 397 aa17.95■□□□□ 0.46
COL18A1-207ENST00000473212 RHBDL1O75783 438 aa17.95■□□□□ 0.46
COL18A1-207ENST00000473212 CNOT4O95628 575 aaKnown RBP17.95■□□□□ 0.46
COL18A1-207ENST00000473212 TDGF1P13385 188 aa17.95■□□□□ 0.46
COL18A1-207ENST00000473212 CLDN18P56856 261 aa17.95■□□□□ 0.46
COL18A1-207ENST00000473212 NKX6-1P78426 367 aaPredicted RBP17.95■□□□□ 0.46
COL18A1-207ENST00000473212 DCAF12Q5T6F0 453 aa17.95■□□□□ 0.46
COL18A1-207ENST00000473212 PRR18Q8N4B5 295 aa17.95■□□□□ 0.46
COL18A1-207ENST00000473212 OR10G4Q8NGN3 311 aa17.95■□□□□ 0.46
COL18A1-207ENST00000473212 SCGB1C1Q8TD33 95 aa17.95■□□□□ 0.46
COL18A1-207ENST00000473212 IL1F10Q8WWZ1 152 aa17.95■□□□□ 0.46
COL18A1-207ENST00000473212 RAB40CQ96S21 281 aa17.95■□□□□ 0.46
COL18A1-207ENST00000473212 CACNG5Q9UF02 275 aa17.95■□□□□ 0.46
COL18A1-207ENST00000473212 LOXL2Q9Y4K0 774 aa17.95■□□□□ 0.46
COL18A1-207ENST00000473212 METTL15P1P0C7V9 234 aa17.94■□□□□ 0.46
COL18A1-207ENST00000473212 BCL2P10415 239 aa17.94■□□□□ 0.46
COL18A1-207ENST00000473212 ARL16Q0P5N6 197 aa17.94■□□□□ 0.46
COL18A1-207ENST00000473212 ZNF726P1Q15940 193 aa17.94■□□□□ 0.46
COL18A1-207ENST00000473212 SSX7Q7RTT5 188 aa17.94■□□□□ 0.46
COL18A1-207ENST00000473212 TMEM45BQ96B21 275 aa17.94■□□□□ 0.46
COL18A1-207ENST00000473212 FAM210BQ96KR6 192 aa17.94■□□□□ 0.46
COL18A1-207ENST00000473212 CISD1Q9NZ45 108 aaKnown RBP17.94■□□□□ 0.46
COL18A1-207ENST00000473212 TREM2Q9NZC2 230 aa17.94■□□□□ 0.46
COL18A1-207ENST00000473212 B4DEV8 164 aa17.94■□□□□ 0.46
COL18A1-207ENST00000473212 PPP1R2P9O14990 202 aa17.94■□□□□ 0.46
COL18A1-207ENST00000473212 OR2T2Q6IF00 324 aa17.94■□□□□ 0.46
COL18A1-207ENST00000473212 ABHD5Q8WTS1 349 aa17.94■□□□□ 0.46
COL18A1-207ENST00000473212 FRZBQ92765 325 aa17.94■□□□□ 0.46
COL18A1-207ENST00000473212 HIST1H2AAQ96QV6 131 aa17.94■□□□□ 0.46
COL18A1-207ENST00000473212 ZNF703Q9H7S9 590 aaPredicted RBP17.94■□□□□ 0.46
COL18A1-207ENST00000473212 OR1A1Q9P1Q5 309 aa17.94■□□□□ 0.46
COL18A1-207ENST00000473212 TRAV24A0A0B4J272 114 aa17.93■□□□□ 0.46
COL18A1-207ENST00000473212 IGKV1-39P01597 117 aa17.93■□□□□ 0.46
COL18A1-207ENST00000473212 IGKV1D-39P04432 117 aa17.93■□□□□ 0.46
COL18A1-207ENST00000473212 TRGC1P0CF51 173 aa17.93■□□□□ 0.46
COL18A1-207ENST00000473212 NRN1LQ496H8 165 aa17.93■□□□□ 0.46
COL18A1-207ENST00000473212 FAM180AQ6UWF9 173 aa17.93■□□□□ 0.46
COL18A1-207ENST00000473212 HIST3H2BBQ8N257 126 aa17.93■□□□□ 0.46
COL18A1-207ENST00000473212 OR2M7Q8NG81 312 aa17.93■□□□□ 0.46
COL18A1-207ENST00000473212 APOBEC3DQ96AK3 386 aaPredicted RBP17.93■□□□□ 0.46
COL18A1-207ENST00000473212 CACNA1DQ01668 2161 aa17.93■□□□□ 0.46
COL18A1-207ENST00000473212 GATCO43716 136 aaKnown RBP17.93■□□□□ 0.46
COL18A1-207ENST00000473212 SERPINA7P05543 415 aa17.93■□□□□ 0.46
COL18A1-207ENST00000473212 C4orf17Q53FE4 359 aa17.93■□□□□ 0.46
COL18A1-207ENST00000473212 RIMS4Q9H426 269 aaPredicted RBP17.93■□□□□ 0.46
COL18A1-207ENST00000473212 COLQQ9Y215 455 aaPredicted RBP17.93■□□□□ 0.46
COL18A1-207ENST00000473212 CHD3Q12873 2000 aaKnown RBP17.93■□□□□ 0.46
COL18A1-207ENST00000473212 TNRC6AQ8NDV7 1962 aaKnown RBP17.92■□□□□ 0.46
COL18A1-207ENST00000473212 CD300LBA8K4G0 201 aa17.92■□□□□ 0.46
COL18A1-207ENST00000473212 C6orf15Q6UXA7 325 aaPredicted RBP17.92■□□□□ 0.46
COL18A1-207ENST00000473212 LINC00696Q6ZRV3 163 aa17.92■□□□□ 0.46
COL18A1-207ENST00000473212 NUFIP2Q7Z417 695 aaKnown RBP17.92■□□□□ 0.46
COL18A1-207ENST00000473212 C1orf87Q8N0U7 546 aa17.92■□□□□ 0.46
COL18A1-207ENST00000473212 OR5A2Q8NGI9 324 aa17.92■□□□□ 0.46
COL18A1-207ENST00000473212 OR13D1Q8NGV5 346 aa17.92■□□□□ 0.46
COL18A1-207ENST00000473212 PSENENQ9NZ42 101 aa17.92■□□□□ 0.46
COL18A1-207ENST00000473212 ARHGAP21Q5T5U3 1957 aa17.92■□□□□ 0.46
COL18A1-207ENST00000473212 SYNGR2O43760 224 aa17.92■□□□□ 0.46
COL18A1-207ENST00000473212 WNT5AP41221 380 aa17.92■□□□□ 0.46
COL18A1-207ENST00000473212 DUSP3P51452 185 aaPredicted RBP17.92■□□□□ 0.46
COL18A1-207ENST00000473212 SLC25A6P12236 298 aa17.91■□□□□ 0.46
COL18A1-207ENST00000473212 HOXA4Q00056 320 aaPredicted RBP17.91■□□□□ 0.46
COL18A1-207ENST00000473212 ZNF525Q8N782 197 aa17.91■□□□□ 0.46
COL18A1-207ENST00000473212 SSX3Q99909 188 aa17.91■□□□□ 0.46
COL18A1-207ENST00000473212 C12orf49Q9H741 205 aa17.91■□□□□ 0.46
COL18A1-207ENST00000473212 PPP1R3CQ9UQK1 317 aa17.91■□□□□ 0.46
COL18A1-207ENST00000473212 IGKV3D-15A0A087WSY6 115 aa17.91■□□□□ 0.46
COL18A1-207ENST00000473212 CLDN34H7C241 214 aa17.91■□□□□ 0.46
COL18A1-207ENST00000473212 NDUFS6O75380 124 aaKnown RBP17.91■□□□□ 0.46
COL18A1-207ENST00000473212 SSPNQ14714 243 aa17.91■□□□□ 0.46
COL18A1-207ENST00000473212 HAPLN4Q86UW8 402 aa17.91■□□□□ 0.46
COL18A1-207ENST00000473212 OR10V1Q8NGI7 309 aa17.91■□□□□ 0.46
COL18A1-207ENST00000473212 CA5BP1Q8WTZ4 195 aa17.91■□□□□ 0.46
COL18A1-207ENST00000473212 RCC1LQ96I51 464 aaKnown RBP17.91■□□□□ 0.46
COL18A1-207ENST00000473212 POM121L2Q96KW2 1035 aa17.91■□□□□ 0.46
COL18A1-207ENST00000473212 OPA3Q9H6K4 179 aa17.91■□□□□ 0.46
COL18A1-207ENST00000473212 OR14J1Q9UGF5 321 aa17.91■□□□□ 0.46
COL18A1-207ENST00000473212 PRSS50Q9UI38 385 aa17.91■□□□□ 0.46
COL18A1-207ENST00000473212 COL27A1Q8IZC6 1860 aaPredicted RBP17.9■□□□□ 0.46
COL18A1-207ENST00000473212 CYB5R3P00387 301 aaPredicted RBP17.9■□□□□ 0.46
COL18A1-207ENST00000473212 SELEP16581 610 aa17.9■□□□□ 0.46
COL18A1-207ENST00000473212 HNF4GQ14541 408 aa17.9■□□□□ 0.46
COL18A1-207ENST00000473212 OR5P3Q8WZ94 311 aa17.9■□□□□ 0.46
COL18A1-207ENST00000473212 GTF3AQ92664 365 aaKnown RBP17.9■□□□□ 0.46
COL18A1-207ENST00000473212 CDX2Q99626 313 aaPredicted RBP17.9■□□□□ 0.46
COL18A1-207ENST00000473212 DLL3Q9NYJ7 618 aa17.9■□□□□ 0.46
COL18A1-207ENST00000473212 FOXJ2Q9P0K8 574 aa17.9■□□□□ 0.46
COL18A1-207ENST00000473212 TMEM265A0A087WTH1 108 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms