RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 OR8H1Q8NGG4 311 aa12.04□□□□□ -0.48
VTI1A-203ENST00000472892 OR1L1Q8NH94 360 aa12.04□□□□□ -0.48
VTI1A-203ENST00000472892 THRSPQ92748 146 aa12.04□□□□□ -0.48
VTI1A-203ENST00000472892 Q96M66 194 aa12.04□□□□□ -0.48
VTI1A-203ENST00000472892 S1PR3Q99500 378 aa12.04□□□□□ -0.48
VTI1A-203ENST00000472892 MBNL3Q9NUK0 354 aaKnown RBP12.04□□□□□ -0.48
VTI1A-203ENST00000472892 GHRLQ9UBU3 117 aa12.04□□□□□ -0.48
VTI1A-203ENST00000472892 AP4M1O00189 453 aa12.03□□□□□ -0.48
VTI1A-203ENST00000472892 MAPK3P27361 379 aaPredicted RBP12.03□□□□□ -0.48
VTI1A-203ENST00000472892 GP2P55259 537 aaKnown RBP12.03□□□□□ -0.48
VTI1A-203ENST00000472892 PNLIPRP3Q17RR3 467 aa12.03□□□□□ -0.48
VTI1A-203ENST00000472892 RNLSQ5VYX0 342 aa12.03□□□□□ -0.48
VTI1A-203ENST00000472892 TEX38Q6PEX7 206 aa12.03□□□□□ -0.48
VTI1A-203ENST00000472892 C8orf86Q6ZUL3 223 aa12.03□□□□□ -0.48
VTI1A-203ENST00000472892 ZNF554Q86TJ5 538 aa12.03□□□□□ -0.48
VTI1A-203ENST00000472892 PRR18Q8N4B5 295 aa12.03□□□□□ -0.48
VTI1A-203ENST00000472892 OR10V1Q8NGI7 309 aa12.03□□□□□ -0.48
VTI1A-203ENST00000472892 TFAP2CQ92754 450 aa12.03□□□□□ -0.48
VTI1A-203ENST00000472892 P2RX4Q99571 388 aa12.03□□□□□ -0.48
VTI1A-203ENST00000472892 GON7Q9BXV9 100 aa12.03□□□□□ -0.48
VTI1A-203ENST00000472892 TAF9BQ9HBM6 251 aa12.03□□□□□ -0.48
VTI1A-203ENST00000472892 OR2S2Q9NQN1 319 aa12.03□□□□□ -0.48
VTI1A-203ENST00000472892 ERGIC3Q9Y282 383 aa12.03□□□□□ -0.48
VTI1A-203ENST00000472892 UBE2QL1A1L167 161 aa12.02□□□□□ -0.49
VTI1A-203ENST00000472892 PDCD6O75340 191 aa12.02□□□□□ -0.49
VTI1A-203ENST00000472892 F2RL1P55085 397 aa12.02□□□□□ -0.49
VTI1A-203ENST00000472892 MORN2Q502X0 79 aa12.02□□□□□ -0.49
VTI1A-203ENST00000472892 ZNF695Q8IW36 515 aa12.02□□□□□ -0.49
VTI1A-203ENST00000472892 FAM71E2Q8N5Q1 922 aa12.02□□□□□ -0.49
VTI1A-203ENST00000472892 MS4A15Q8N5U1 240 aa12.02□□□□□ -0.49
VTI1A-203ENST00000472892 CYYR1Q96J86 154 aa12.02□□□□□ -0.49
VTI1A-203ENST00000472892 RASL11BQ9BPW5 248 aa12.02□□□□□ -0.49
VTI1A-203ENST00000472892 MCRIP2Q9BUT9 160 aaKnown RBP12.02□□□□□ -0.49
VTI1A-203ENST00000472892 GPR61Q9BZJ8 451 aa12.02□□□□□ -0.49
VTI1A-203ENST00000472892 WI2-2373I1.2A0A1W2PRP0 233 aa12.01□□□□□ -0.49
VTI1A-203ENST00000472892 NUDT19A8MXV4 375 aa12.01□□□□□ -0.49
VTI1A-203ENST00000472892 LANCL1O43813 399 aa12.01□□□□□ -0.49
VTI1A-203ENST00000472892 CD37P11049 281 aa12.01□□□□□ -0.49
VTI1A-203ENST00000472892 HOXD3P31249 432 aaPredicted RBP12.01□□□□□ -0.49
VTI1A-203ENST00000472892 GPR50Q13585 617 aa12.01□□□□□ -0.49
VTI1A-203ENST00000472892 INSL4Q14641 139 aa12.01□□□□□ -0.49
VTI1A-203ENST00000472892 ACSM3Q53FZ2 586 aa12.01□□□□□ -0.49
VTI1A-203ENST00000472892 C6orf141Q5SZD1 244 aa12.01□□□□□ -0.49
VTI1A-203ENST00000472892 LRRTM1Q86UE6 522 aa12.01□□□□□ -0.49
VTI1A-203ENST00000472892 RNF152Q8N8N0 203 aa12.01□□□□□ -0.49
VTI1A-203ENST00000472892 KLHL30-AS1Q8NEE0 82 aa12.01□□□□□ -0.49
VTI1A-203ENST00000472892 OR52L2PQ8NGH6 319 aa12.01□□□□□ -0.49
VTI1A-203ENST00000472892 MRPL30Q8TCC3 161 aaKnown RBP12.01□□□□□ -0.49
VTI1A-203ENST00000472892 FAM46BQ96A09 425 aa12.01□□□□□ -0.49
VTI1A-203ENST00000472892 RBMXL1Q96E39 390 aaKnown RBP12.01□□□□□ -0.49
VTI1A-203ENST00000472892 CST11Q9H112 138 aa12.01□□□□□ -0.49
VTI1A-203ENST00000472892 DCLRE1BQ9H816 532 aa12.01□□□□□ -0.49
VTI1A-203ENST00000472892 KCNIP1Q9NZI2 227 aa12.01□□□□□ -0.49
VTI1A-203ENST00000472892 H0YHG0 523 aa12□□□□□ -0.49
VTI1A-203ENST00000472892 CDK1P06493 297 aa12□□□□□ -0.49
VTI1A-203ENST00000472892 ELANEP08246 267 aa12□□□□□ -0.49
VTI1A-203ENST00000472892 UBBP0CG47 229 aa12□□□□□ -0.49
VTI1A-203ENST00000472892 SOX6P35712 828 aa12□□□□□ -0.49
VTI1A-203ENST00000472892 HTD2P86397 168 aa12□□□□□ -0.49
VTI1A-203ENST00000472892 CFHR3Q02985 330 aa12□□□□□ -0.49
VTI1A-203ENST00000472892 FOXE3Q13461 319 aa12□□□□□ -0.49
VTI1A-203ENST00000472892 LY6G6FQ5SQ64 297 aa12□□□□□ -0.49
VTI1A-203ENST00000472892 C1orf100Q5SVJ3 147 aa12□□□□□ -0.49
VTI1A-203ENST00000472892 C5orf24Q7Z6I8 188 aa12□□□□□ -0.49
VTI1A-203ENST00000472892 PHYHIPQ92561 330 aa12□□□□□ -0.49
VTI1A-203ENST00000472892 HSPB9Q9BQS6 159 aa12□□□□□ -0.49
VTI1A-203ENST00000472892 MND1Q9BWT6 205 aa12□□□□□ -0.49
VTI1A-203ENST00000472892 ZNF580Q9UK33 172 aa12□□□□□ -0.49
VTI1A-203ENST00000472892 JPT1Q9UK76 154 aa12□□□□□ -0.49
VTI1A-203ENST00000472892 LRRC42Q9Y546 428 aa12□□□□□ -0.49
VTI1A-203ENST00000472892 RRP9O43818 475 aaKnown RBP11.99□□□□□ -0.49
VTI1A-203ENST00000472892 YPEL1O60688 119 aa11.99□□□□□ -0.49
VTI1A-203ENST00000472892 IGF1P05019 195 aa11.99□□□□□ -0.49
VTI1A-203ENST00000472892 RPLP1P05386 114 aaKnown RBP11.99□□□□□ -0.49
VTI1A-203ENST00000472892 VSIG8P0DPA2 414 aa11.99□□□□□ -0.49
VTI1A-203ENST00000472892 CHATP28329 748 aa11.99□□□□□ -0.49
VTI1A-203ENST00000472892 CDX1P47902 265 aaPredicted RBP11.99□□□□□ -0.49
VTI1A-203ENST00000472892 GABPB1Q06547 395 aaPredicted RBP11.99□□□□□ -0.49
VTI1A-203ENST00000472892 LSAMPQ13449 338 aa11.99□□□□□ -0.49
VTI1A-203ENST00000472892 KIR2DS1Q14954 304 aa11.99□□□□□ -0.49
VTI1A-203ENST00000472892 DEFB121Q5J5C9 76 aa11.99□□□□□ -0.49
VTI1A-203ENST00000472892 CXorf66Q5JRM2 361 aaPredicted RBP11.99□□□□□ -0.49
VTI1A-203ENST00000472892 FAM27D1Q5T7N8 215 aa11.99□□□□□ -0.49
VTI1A-203ENST00000472892 GLT8D1Q68CQ7 371 aa11.99□□□□□ -0.49
VTI1A-203ENST00000472892 ODF3L1Q8IXM7 274 aa11.99□□□□□ -0.49
VTI1A-203ENST00000472892 DPF1Q92782 380 aa11.99□□□□□ -0.49
VTI1A-203ENST00000472892 RAX2Q96IS3 184 aa11.99□□□□□ -0.49
VTI1A-203ENST00000472892 YPEL2Q96QA6 119 aa11.99□□□□□ -0.49
VTI1A-203ENST00000472892 SULT4A1Q9BR01 284 aa11.99□□□□□ -0.49
VTI1A-203ENST00000472892 LSM2Q9Y333 95 aaKnown RBP11.99□□□□□ -0.49
VTI1A-203ENST00000472892 PTGES3LE9PB15 166 aa11.98□□□□□ -0.49
VTI1A-203ENST00000472892 CCL24O00175 119 aa11.98□□□□□ -0.49
VTI1A-203ENST00000472892 LCE2BO14633 110 aa11.98□□□□□ -0.49
VTI1A-203ENST00000472892 IGHG4P01861 327 aa11.98□□□□□ -0.49
VTI1A-203ENST00000472892 SRMP19623 302 aa11.98□□□□□ -0.49
VTI1A-203ENST00000472892 PPP1CCP36873 323 aaKnown RBP11.98□□□□□ -0.49
VTI1A-203ENST00000472892 RPS27AP62979 156 aaKnown RBP11.98□□□□□ -0.49
VTI1A-203ENST00000472892 GNMTQ14749 295 aa11.98□□□□□ -0.49
VTI1A-203ENST00000472892 SPHARQ15513 63 aa11.98□□□□□ -0.49
VTI1A-203ENST00000472892 NKAPLQ5M9Q1 402 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms