RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 CRB1P82279 1406 aa2.05□□□□□ -2.08
PRPF40A-208ENST00000472760 LOC102725191A0A1B0GVB3 256 aa2.04□□□□□ -2.08
PRPF40A-208ENST00000472760 IQCF5A8MTL0 148 aa2.04□□□□□ -2.08
PRPF40A-208ENST00000472760 MKRN2OSH3BPM6 223 aa2.04□□□□□ -2.08
PRPF40A-208ENST00000472760 M0QYV0 167 aa2.04□□□□□ -2.08
PRPF40A-208ENST00000472760 SYNGR1O43759 233 aa2.04□□□□□ -2.08
PRPF40A-208ENST00000472760 RD3LP0DJH9 198 aa2.04□□□□□ -2.08
PRPF40A-208ENST00000472760 CPMP14384 443 aa2.04□□□□□ -2.08
PRPF40A-208ENST00000472760 STC1P52823 247 aa2.04□□□□□ -2.08
PRPF40A-208ENST00000472760 PMS2P3Q13401 168 aa2.04□□□□□ -2.08
PRPF40A-208ENST00000472760 TRMT12Q53H54 448 aaKnown RBP2.04□□□□□ -2.08
PRPF40A-208ENST00000472760 ZFAND2AQ8N6M9 145 aa2.04□□□□□ -2.08
PRPF40A-208ENST00000472760 ANGPTL6Q8NI99 470 aa2.04□□□□□ -2.08
PRPF40A-208ENST00000472760 SUN5Q8TC36 379 aa2.04□□□□□ -2.08
PRPF40A-208ENST00000472760 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.04□□□□□ -2.08
PRPF40A-208ENST00000472760 NUP205Q92621 2012 aa2.04□□□□□ -2.08
PRPF40A-208ENST00000472760 MED18Q9BUE0 208 aa2.04□□□□□ -2.08
PRPF40A-208ENST00000472760 C1orf109Q9NX04 203 aa2.04□□□□□ -2.08
PRPF40A-208ENST00000472760 FIS1Q9Y3D6 152 aa2.04□□□□□ -2.08
PRPF40A-208ENST00000472760 MTCH2Q9Y6C9 303 aa2.04□□□□□ -2.08
PRPF40A-208ENST00000472760 DNMT1P26358 1616 aaKnown RBP2.03□□□□□ -2.08
PRPF40A-208ENST00000472760 NUP153P49790 1475 aaKnown RBP2.03□□□□□ -2.08
PRPF40A-208ENST00000472760 ERICH4A6NGS2 130 aa2.03□□□□□ -2.08
PRPF40A-208ENST00000472760 TRPC5OSA6NMA1 111 aa2.03□□□□□ -2.08
PRPF40A-208ENST00000472760 F8VZ95 297 aa2.03□□□□□ -2.08
PRPF40A-208ENST00000472760 NEMFO60524 1076 aa2.03□□□□□ -2.08
PRPF40A-208ENST00000472760 ASS1P00966 412 aaKnown RBP2.03□□□□□ -2.08
PRPF40A-208ENST00000472760 NQO1P15559 274 aaKnown RBP2.03□□□□□ -2.08
PRPF40A-208ENST00000472760 ORM2P19652 201 aa2.03□□□□□ -2.08
PRPF40A-208ENST00000472760 PPP1CCP36873 323 aaKnown RBP2.03□□□□□ -2.08
PRPF40A-208ENST00000472760 KRTAP12-4P60329 112 aa2.03□□□□□ -2.08
PRPF40A-208ENST00000472760 HTR4Q13639 388 aa2.03□□□□□ -2.08
PRPF40A-208ENST00000472760 PDGFRLQ15198 375 aa2.03□□□□□ -2.08
PRPF40A-208ENST00000472760 ZNHIT3Q15649 155 aaPredicted RBP2.03□□□□□ -2.08
PRPF40A-208ENST00000472760 TMEM176BQ3YBM2 270 aaPredicted RBP2.03□□□□□ -2.08
PRPF40A-208ENST00000472760 TIMM23BQ5SRD1 257 aa2.03□□□□□ -2.08
PRPF40A-208ENST00000472760 XKRXQ6PP77 449 aa2.03□□□□□ -2.08
PRPF40A-208ENST00000472760 SDIM1Q6ZPB5 146 aa2.03□□□□□ -2.08
PRPF40A-208ENST00000472760 BOD1L2Q8IYS8 172 aa2.03□□□□□ -2.08
PRPF40A-208ENST00000472760 YIPF7Q8N8F6 280 aa2.03□□□□□ -2.08
PRPF40A-208ENST00000472760 CAPZA3Q96KX2 299 aa2.03□□□□□ -2.08
PRPF40A-208ENST00000472760 NDEL1Q9GZM8 345 aa2.03□□□□□ -2.08
PRPF40A-208ENST00000472760 LINC00527Q9UJ94 153 aa2.03□□□□□ -2.08
PRPF40A-208ENST00000472760 TRGV4A0A0C4DH28 118 aa2.02□□□□□ -2.09
PRPF40A-208ENST00000472760 C17orf51A8MQB3 221 aa2.02□□□□□ -2.09
PRPF40A-208ENST00000472760 SMLR1H3BR10 107 aa2.02□□□□□ -2.09
PRPF40A-208ENST00000472760 F8A1P23610 371 aa2.02□□□□□ -2.09
PRPF40A-208ENST00000472760 ADORA1P30542 326 aa2.02□□□□□ -2.09
PRPF40A-208ENST00000472760 PSMD8P48556 350 aa2.02□□□□□ -2.09
PRPF40A-208ENST00000472760 PSMB3P49720 205 aa2.02□□□□□ -2.09
PRPF40A-208ENST00000472760 SLC35A2P78381 396 aa2.02□□□□□ -2.09
PRPF40A-208ENST00000472760 SLAMF1Q13291 335 aa2.02□□□□□ -2.09
PRPF40A-208ENST00000472760 C1DQ13901 141 aaKnown RBP2.02□□□□□ -2.09
PRPF40A-208ENST00000472760 OR4C16Q8NGL9 310 aa2.02□□□□□ -2.09
PRPF40A-208ENST00000472760 SMIM12Q96EX1 92 aa2.02□□□□□ -2.09
PRPF40A-208ENST00000472760 CD300AQ9UGN4 299 aa2.02□□□□□ -2.09
PRPF40A-208ENST00000472760 GLS2Q9UI32 602 aa2.02□□□□□ -2.09
PRPF40A-208ENST00000472760 DNAJC12Q9UKB3 198 aa2.02□□□□□ -2.09
PRPF40A-208ENST00000472760 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.02□□□□□ -2.09
PRPF40A-208ENST00000472760 SAMHD1Q9Y3Z3 626 aaKnown RBP2.02□□□□□ -2.09
PRPF40A-208ENST00000472760 HEY1Q9Y5J3 304 aa2.02□□□□□ -2.09
PRPF40A-208ENST00000472760 ALG5Q9Y673 324 aa2.02□□□□□ -2.09
PRPF40A-208ENST00000472760 M0QX08 132 aa2.01□□□□□ -2.09
PRPF40A-208ENST00000472760 ACTBP60709 375 aa2.01□□□□□ -2.09
PRPF40A-208ENST00000472760 ACTG1P63261 375 aa2.01□□□□□ -2.09
PRPF40A-208ENST00000472760 FOXF1Q12946 379 aa2.01□□□□□ -2.09
PRPF40A-208ENST00000472760 CCDC121Q6ZUS5 278 aa2.01□□□□□ -2.09
PRPF40A-208ENST00000472760 SPATA24Q86W54 205 aa2.01□□□□□ -2.09
PRPF40A-208ENST00000472760 TMEM75Q8N9X5 138 aa2.01□□□□□ -2.09
PRPF40A-208ENST00000472760 ERMNQ8TAM6 284 aa2.01□□□□□ -2.09
PRPF40A-208ENST00000472760 ATP6V1G3Q96LB4 118 aa2.01□□□□□ -2.09
PRPF40A-208ENST00000472760 ZNF251Q9BRH9 671 aa2.01□□□□□ -2.09
PRPF40A-208ENST00000472760 TMEM208Q9BTX3 173 aa2.01□□□□□ -2.09
PRPF40A-208ENST00000472760 BBS2Q9BXC9 721 aa2.01□□□□□ -2.09
PRPF40A-208ENST00000472760 SNX10Q9Y5X0 201 aa2.01□□□□□ -2.09
PRPF40A-208ENST00000472760 COL18A1P39060 1754 aa2□□□□□ -2.09
PRPF40A-208ENST00000472760 CLUHO75153 1309 aa2□□□□□ -2.09
PRPF40A-208ENST00000472760 PTPRJQ12913 1337 aa2□□□□□ -2.09
PRPF40A-208ENST00000472760 SCN2BO60939 215 aa2□□□□□ -2.09
PRPF40A-208ENST00000472760 NDUFS6O75380 124 aaKnown RBP2□□□□□ -2.09
PRPF40A-208ENST00000472760 AGTR1P30556 359 aa2□□□□□ -2.09
PRPF40A-208ENST00000472760 LPAR6P43657 344 aa2□□□□□ -2.09
PRPF40A-208ENST00000472760 NATD1Q8N6N6 113 aa2□□□□□ -2.09
PRPF40A-208ENST00000472760 OR10A6Q8NH74 314 aa2□□□□□ -2.09
PRPF40A-208ENST00000472760 TNFAIP8L1Q8WVP5 186 aa2□□□□□ -2.09
PRPF40A-208ENST00000472760 METTL9Q9H1A3 318 aa2□□□□□ -2.09
PRPF40A-208ENST00000472760 TMEM106BQ9NUM4 274 aa2□□□□□ -2.09
PRPF40A-208ENST00000472760 LINC00862A6NCI5 91 aa1.99□□□□□ -2.09
PRPF40A-208ENST00000472760 TRAPPC3O43617 180 aa1.99□□□□□ -2.09
PRPF40A-208ENST00000472760 ARL6IP5O75915 188 aa1.99□□□□□ -2.09
PRPF40A-208ENST00000472760 PET100P0DJ07 73 aa1.99□□□□□ -2.09
PRPF40A-208ENST00000472760 BLVRBP30043 206 aaPredicted RBP1.99□□□□□ -2.09
PRPF40A-208ENST00000472760 ZNF117Q03924 483 aa1.99□□□□□ -2.09
PRPF40A-208ENST00000472760 CLEC12BQ2HXU8 276 aa1.99□□□□□ -2.09
PRPF40A-208ENST00000472760 FAM229BQ4G0N7 80 aa1.99□□□□□ -2.09
PRPF40A-208ENST00000472760 MRPL51Q4U2R6 128 aaKnown RBP1.99□□□□□ -2.09
PRPF40A-208ENST00000472760 FAM45BPQ6NSW5 357 aa1.99□□□□□ -2.09
PRPF40A-208ENST00000472760 SCGB1D4Q6XE38 83 aa1.99□□□□□ -2.09
PRPF40A-208ENST00000472760 Q6ZRU5 148 aa1.99□□□□□ -2.09
PRPF40A-208ENST00000472760 ZNF767PQ75MW2 155 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms