RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 TRAV41A0A0B4J266 112 aa7.14□□□□□ -1.27
VCL-204ENST00000472585 DAPL1A0PJW8 107 aa7.14□□□□□ -1.27
VCL-204ENST00000472585 A8MZ25 164 aa7.14□□□□□ -1.27
VCL-204ENST00000472585 LINC01619G3V211 115 aa7.14□□□□□ -1.27
VCL-204ENST00000472585 FCN1O00602 326 aa7.14□□□□□ -1.27
VCL-204ENST00000472585 ORC5O43913 435 aa7.14□□□□□ -1.27
VCL-204ENST00000472585 HTR3BO95264 441 aa7.14□□□□□ -1.27
VCL-204ENST00000472585 OR5H8P0DN80 308 aa7.14□□□□□ -1.27
VCL-204ENST00000472585 HOXB6P17509 224 aaKnown RBP7.14□□□□□ -1.27
VCL-204ENST00000472585 KCNJ3P48549 501 aa7.14□□□□□ -1.27
VCL-204ENST00000472585 ADARB1P78563 741 aaKnown RBP7.14□□□□□ -1.27
VCL-204ENST00000472585 LSAMPQ13449 338 aa7.14□□□□□ -1.27
VCL-204ENST00000472585 HAGHQ16775 308 aa7.14□□□□□ -1.27
VCL-204ENST00000472585 ZNF497Q6ZNH5 498 aa7.14□□□□□ -1.27
VCL-204ENST00000472585 LHFPL3Q86UP9 236 aa7.14□□□□□ -1.27
VCL-204ENST00000472585 OR10V1Q8NGI7 309 aa7.14□□□□□ -1.27
VCL-204ENST00000472585 OR4C12Q96R67 309 aa7.14□□□□□ -1.27
VCL-204ENST00000472585 GABARAPL3Q9BY60 117 aa7.14□□□□□ -1.27
VCL-204ENST00000472585 RIBC2Q9H4K1 309 aa7.14□□□□□ -1.27
VCL-204ENST00000472585 TUBA4BQ9H853 241 aa7.14□□□□□ -1.27
VCL-204ENST00000472585 FAM118AQ9NWS6 357 aa7.14□□□□□ -1.27
VCL-204ENST00000472585 ST3GAL6Q9Y274 331 aa7.14□□□□□ -1.27
VCL-204ENST00000472585 EXOGQ9Y2C4 368 aaKnown RBP7.14□□□□□ -1.27
VCL-204ENST00000472585 TMEM30CPA0ZSE6 113 aa7.13□□□□□ -1.27
VCL-204ENST00000472585 HLA-DRB1P01911 266 aa7.13□□□□□ -1.27
VCL-204ENST00000472585 OR8U9P0C7N5 309 aa7.13□□□□□ -1.27
VCL-204ENST00000472585 ARSBP15848 533 aa7.13□□□□□ -1.27
VCL-204ENST00000472585 GTF2A1P52655 376 aaPredicted RBP7.13□□□□□ -1.27
VCL-204ENST00000472585 RBM11P57052 281 aaKnown RBP7.13□□□□□ -1.27
VCL-204ENST00000472585 ACTBP60709 375 aa7.13□□□□□ -1.27
VCL-204ENST00000472585 RSU1Q15404 277 aa7.13□□□□□ -1.27
VCL-204ENST00000472585 MMDQ15546 238 aa7.13□□□□□ -1.27
VCL-204ENST00000472585 NHLRC3Q5JS37 347 aa7.13□□□□□ -1.27
VCL-204ENST00000472585 SLC25A30Q5SVS4 291 aa7.13□□□□□ -1.27
VCL-204ENST00000472585 XAF1Q6GPH4 301 aa7.13□□□□□ -1.27
VCL-204ENST00000472585 IL34Q6ZMJ4 242 aa7.13□□□□□ -1.27
VCL-204ENST00000472585 OR52N1Q8NH53 320 aa7.13□□□□□ -1.27
VCL-204ENST00000472585 LGALS12Q96DT0 336 aa7.13□□□□□ -1.27
VCL-204ENST00000472585 NABP2Q9BQ15 211 aa7.13□□□□□ -1.27
VCL-204ENST00000472585 CHCHD6Q9BRQ6 235 aa7.13□□□□□ -1.27
VCL-204ENST00000472585 PARP11Q9NR21 331 aa7.13□□□□□ -1.27
VCL-204ENST00000472585 TAS2R4Q9NYW5 299 aa7.13□□□□□ -1.27
VCL-204ENST00000472585 GAB2Q9UQC2 676 aa7.13□□□□□ -1.27
VCL-204ENST00000472585 NUBP2Q9Y5Y2 271 aa7.13□□□□□ -1.27
VCL-204ENST00000472585 F8W735 103 aaPredicted RBP7.12□□□□□ -1.27
VCL-204ENST00000472585 HSPA12AO43301 675 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 LANCL1O43813 399 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 OR7C1O76099 320 aaPredicted RBP7.12□□□□□ -1.27
VCL-204ENST00000472585 IGLV1-51P01701 117 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 IGHV3-11P01762 117 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 HBZP02008 142 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 RCC1P18754 421 aaPredicted RBP7.12□□□□□ -1.27
VCL-204ENST00000472585 RAB3AP20336 220 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 OR3A3P47888 321 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 SOX2P48431 317 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 PITPNAQ00169 270 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 GNMTQ14749 295 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 C5orf64Q2M2E5 130 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 Q3ZCU0 254 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 MORN2Q502X0 79 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 SYT6Q5T7P8 510 aaPredicted RBP7.12□□□□□ -1.27
VCL-204ENST00000472585 LIN54Q6MZP7 749 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 ZDHHC13Q8IUH4 622 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 GAPTQ8N292 157 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 ACBD7Q8N6N7 88 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 NPBQ8NG41 125 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 OR52L2PQ8NGH6 319 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 OR4K15Q8NH41 348 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 GATAD1Q8WUU5 269 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 RFKQ969G6 155 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 GPER1Q99527 375 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 THAP7Q9BT49 309 aaPredicted RBP7.12□□□□□ -1.27
VCL-204ENST00000472585 MRPL20Q9BYC9 149 aaKnown RBP7.12□□□□□ -1.27
VCL-204ENST00000472585 RETNQ9HD89 108 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 ING4Q9UNL4 249 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 DHDHQ9UQ10 334 aa7.12□□□□□ -1.27
VCL-204ENST00000472585 GYG2O15488 501 aa7.11□□□□□ -1.27
VCL-204ENST00000472585 NDUFA3O95167 84 aa7.11□□□□□ -1.27
VCL-204ENST00000472585 LGALS1P09382 135 aaKnown RBP7.11□□□□□ -1.27
VCL-204ENST00000472585 GABRB1P18505 474 aa7.11□□□□□ -1.27
VCL-204ENST00000472585 CRIP2P52943 208 aaPredicted RBP7.11□□□□□ -1.27
VCL-204ENST00000472585 SNRPGP62308 76 aaKnown RBP7.11□□□□□ -1.27
VCL-204ENST00000472585 CX3CL1P78423 397 aa7.11□□□□□ -1.27
VCL-204ENST00000472585 ECSCRQ19T08 205 aa7.11□□□□□ -1.27
VCL-204ENST00000472585 LRRC36Q1X8D7 754 aa7.11□□□□□ -1.27
VCL-204ENST00000472585 ATAD3CQ5T2N8 411 aa7.11□□□□□ -1.27
VCL-204ENST00000472585 ANKRD13BQ86YJ7 626 aa7.11□□□□□ -1.27
VCL-204ENST00000472585 CCDC197Q8NCU1 140 aa7.11□□□□□ -1.27
VCL-204ENST00000472585 OR5AK2Q8NH90 309 aa7.11□□□□□ -1.27
VCL-204ENST00000472585 RHOVQ96L33 236 aa7.11□□□□□ -1.27
VCL-204ENST00000472585 MS4A10Q96PG2 267 aa7.11□□□□□ -1.27
VCL-204ENST00000472585 RSRP1Q9BUV0 290 aa7.11□□□□□ -1.27
VCL-204ENST00000472585 ALG8Q9BVK2 526 aa7.11□□□□□ -1.27
VCL-204ENST00000472585 TMED9Q9BVK6 235 aa7.11□□□□□ -1.27
VCL-204ENST00000472585 ELOVL1Q9BW60 279 aa7.11□□□□□ -1.27
VCL-204ENST00000472585 JAM3Q9BX67 310 aa7.11□□□□□ -1.27
VCL-204ENST00000472585 FAM192AQ9GZU8 254 aa7.11□□□□□ -1.27
VCL-204ENST00000472585 AMBNQ9NP70 447 aa7.11□□□□□ -1.27
VCL-204ENST00000472585 IL36GQ9NZH8 169 aa7.11□□□□□ -1.27
VCL-204ENST00000472585 RCC2Q9P258 522 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms