RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 Q8N9W7 124 aa12.11□□□□□ -0.47
COL1A1-203ENST00000471344 MRPL30Q8TCC3 161 aaKnown RBP12.11□□□□□ -0.47
COL1A1-203ENST00000471344 MND1Q9BWT6 205 aa12.11□□□□□ -0.47
COL1A1-203ENST00000471344 TAF9BQ9HBM6 251 aa12.11□□□□□ -0.47
COL1A1-203ENST00000471344 PLSCR3Q9NRY6 295 aa12.11□□□□□ -0.47
COL1A1-203ENST00000471344 COL7A1Q02388 2944 aa12.1□□□□□ -0.47
COL1A1-203ENST00000471344 SPINT2O43291 252 aa12.1□□□□□ -0.47
COL1A1-203ENST00000471344 PDCD6O75340 191 aa12.1□□□□□ -0.47
COL1A1-203ENST00000471344 VSIG8P0DPA2 414 aa12.1□□□□□ -0.47
COL1A1-203ENST00000471344 FUT3P21217 361 aa12.1□□□□□ -0.47
COL1A1-203ENST00000471344 KRTAP10-11P60412 298 aa12.1□□□□□ -0.47
COL1A1-203ENST00000471344 RPL23AP62750 156 aaKnown RBP12.1□□□□□ -0.47
COL1A1-203ENST00000471344 RBM48Q5RL73 367 aaKnown RBP12.1□□□□□ -0.47
COL1A1-203ENST00000471344 C6orf183Q5T699 404 aa12.1□□□□□ -0.47
COL1A1-203ENST00000471344 C8orf86Q6ZUL3 223 aa12.1□□□□□ -0.47
COL1A1-203ENST00000471344 OR2W3Q7Z3T1 314 aa12.1□□□□□ -0.47
COL1A1-203ENST00000471344 STPG2Q8N412 459 aa12.1□□□□□ -0.47
COL1A1-203ENST00000471344 LINC00482Q8N8I6 264 aa12.1□□□□□ -0.47
COL1A1-203ENST00000471344 OR52L2PQ8NGH6 319 aa12.1□□□□□ -0.47
COL1A1-203ENST00000471344 HSPB9Q9BQS6 159 aa12.1□□□□□ -0.47
COL1A1-203ENST00000471344 SULT4A1Q9BR01 284 aa12.1□□□□□ -0.47
COL1A1-203ENST00000471344 UQCC2Q9BRT2 126 aa12.1□□□□□ -0.47
COL1A1-203ENST00000471344 NICN1Q9BSH3 213 aa12.1□□□□□ -0.47
COL1A1-203ENST00000471344 MBNL3Q9NUK0 354 aaKnown RBP12.1□□□□□ -0.47
COL1A1-203ENST00000471344 FAM90A10PA6NDY2 464 aa12.09□□□□□ -0.47
COL1A1-203ENST00000471344 FAM90A7PA6NKC0 464 aa12.09□□□□□ -0.47
COL1A1-203ENST00000471344 FAM90A23PA8MXZ1 464 aa12.09□□□□□ -0.47
COL1A1-203ENST00000471344 IL3RAP26951 378 aa12.09□□□□□ -0.47
COL1A1-203ENST00000471344 CHATP28329 748 aa12.09□□□□□ -0.47
COL1A1-203ENST00000471344 PPP1CCP36873 323 aaKnown RBP12.09□□□□□ -0.47
COL1A1-203ENST00000471344 GPR12P47775 334 aa12.09□□□□□ -0.47
COL1A1-203ENST00000471344 ZNF137PP52743 207 aa12.09□□□□□ -0.47
COL1A1-203ENST00000471344 F2RL1P55085 397 aa12.09□□□□□ -0.47
COL1A1-203ENST00000471344 UNC119Q13432 240 aa12.09□□□□□ -0.47
COL1A1-203ENST00000471344 MED22Q15528 200 aa12.09□□□□□ -0.47
COL1A1-203ENST00000471344 REC114Q7Z4M0 266 aa12.09□□□□□ -0.47
COL1A1-203ENST00000471344 TGIF2LXQ8IUE1 241 aa12.09□□□□□ -0.47
COL1A1-203ENST00000471344 MRPL41Q8IXM3 137 aaKnown RBP12.09□□□□□ -0.47
COL1A1-203ENST00000471344 OR2T10Q8NGZ9 312 aa12.09□□□□□ -0.47
COL1A1-203ENST00000471344 CHPT1Q8WUD6 406 aa12.09□□□□□ -0.47
COL1A1-203ENST00000471344 DUX3Q96PT4 197 aa12.09□□□□□ -0.47
COL1A1-203ENST00000471344 SCN3BQ9NY72 215 aa12.09□□□□□ -0.47
COL1A1-203ENST00000471344 A0A0A6YYD4 124 aa12.08□□□□□ -0.48
COL1A1-203ENST00000471344 RGS10O43665 173 aa12.08□□□□□ -0.48
COL1A1-203ENST00000471344 MOSP00540 346 aa12.08□□□□□ -0.48
COL1A1-203ENST00000471344 HTR2CP28335 458 aa12.08□□□□□ -0.48
COL1A1-203ENST00000471344 CD1BP29016 333 aa12.08□□□□□ -0.48
COL1A1-203ENST00000471344 HOXD3P31249 432 aaPredicted RBP12.08□□□□□ -0.48
COL1A1-203ENST00000471344 SPHARQ15513 63 aa12.08□□□□□ -0.48
COL1A1-203ENST00000471344 Q3ZCU0 254 aa12.08□□□□□ -0.48
COL1A1-203ENST00000471344 MORN2Q502X0 79 aa12.08□□□□□ -0.48
COL1A1-203ENST00000471344 LIPKQ5VXJ0 399 aa12.08□□□□□ -0.48
COL1A1-203ENST00000471344 C6orf201Q7Z4U5 140 aa12.08□□□□□ -0.48
COL1A1-203ENST00000471344 CEACAM19Q7Z692 300 aa12.08□□□□□ -0.48
COL1A1-203ENST00000471344 ODF3L1Q8IXM7 274 aa12.08□□□□□ -0.48
COL1A1-203ENST00000471344 MS4A15Q8N5U1 240 aa12.08□□□□□ -0.48
COL1A1-203ENST00000471344 TMEM203Q969S6 136 aa12.08□□□□□ -0.48
COL1A1-203ENST00000471344 S1PR3Q99500 378 aa12.08□□□□□ -0.48
COL1A1-203ENST00000471344 GFI1Q99684 422 aa12.08□□□□□ -0.48
COL1A1-203ENST00000471344 FAAP24Q9BTP7 215 aa12.08□□□□□ -0.48
COL1A1-203ENST00000471344 ABCG5Q9H222 651 aa12.08□□□□□ -0.48
COL1A1-203ENST00000471344 OR2S2Q9NQN1 319 aa12.08□□□□□ -0.48
COL1A1-203ENST00000471344 GHRLQ9UBU3 117 aa12.08□□□□□ -0.48
COL1A1-203ENST00000471344 TPRKBQ9Y3C4 175 aa12.08□□□□□ -0.48
COL1A1-203ENST00000471344 NUDT19A8MXV4 375 aa12.07□□□□□ -0.48
COL1A1-203ENST00000471344 K7EIL1 84 aa12.07□□□□□ -0.48
COL1A1-203ENST00000471344 DENRO43583 198 aaKnown RBP12.07□□□□□ -0.48
COL1A1-203ENST00000471344 RRP9O43818 475 aaKnown RBP12.07□□□□□ -0.48
COL1A1-203ENST00000471344 CA11O75493 328 aa12.07□□□□□ -0.48
COL1A1-203ENST00000471344 RPLP1P05386 114 aaKnown RBP12.07□□□□□ -0.48
COL1A1-203ENST00000471344 GLAP06280 429 aa12.07□□□□□ -0.48
COL1A1-203ENST00000471344 THBS3P49746 956 aa12.07□□□□□ -0.48
COL1A1-203ENST00000471344 RPS25P62851 125 aaKnown RBP12.07□□□□□ -0.48
COL1A1-203ENST00000471344 RPS27AP62979 156 aaKnown RBP12.07□□□□□ -0.48
COL1A1-203ENST00000471344 QRFPP83859 136 aa12.07□□□□□ -0.48
COL1A1-203ENST00000471344 LSAMPQ13449 338 aa12.07□□□□□ -0.48
COL1A1-203ENST00000471344 TMEM30BQ3MIR4 351 aa12.07□□□□□ -0.48
COL1A1-203ENST00000471344 C1orf100Q5SVJ3 147 aa12.07□□□□□ -0.48
COL1A1-203ENST00000471344 TRAT1Q6PIZ9 186 aa12.07□□□□□ -0.48
COL1A1-203ENST00000471344 TMEM91Q6ZNR0 172 aa12.07□□□□□ -0.48
COL1A1-203ENST00000471344 FOXRED2Q8IWF2 684 aa12.07□□□□□ -0.48
COL1A1-203ENST00000471344 FAM71E2Q8N5Q1 922 aa12.07□□□□□ -0.48
COL1A1-203ENST00000471344 KLHL30-AS1Q8NEE0 82 aa12.07□□□□□ -0.48
COL1A1-203ENST00000471344 RITA1Q96K30 269 aa12.07□□□□□ -0.48
COL1A1-203ENST00000471344 ABHD14AQ9BUJ0 271 aa12.07□□□□□ -0.48
COL1A1-203ENST00000471344 TMEM59Q9BXS4 323 aa12.07□□□□□ -0.48
COL1A1-203ENST00000471344 MRPL20Q9BYC9 149 aaKnown RBP12.07□□□□□ -0.48
COL1A1-203ENST00000471344 CCDC90BQ9GZT6 254 aa12.07□□□□□ -0.48
COL1A1-203ENST00000471344 CST11Q9H112 138 aa12.07□□□□□ -0.48
COL1A1-203ENST00000471344 RAB9BQ9NP90 201 aa12.07□□□□□ -0.48
COL1A1-203ENST00000471344 LIN7CQ9NUP9 197 aaKnown RBP12.07□□□□□ -0.48
COL1A1-203ENST00000471344 UCHL1P09936 223 aa12.06□□□□□ -0.48
COL1A1-203ENST00000471344 SLC2A2P11168 524 aaPredicted RBP12.06□□□□□ -0.48
COL1A1-203ENST00000471344 SRMP19623 302 aa12.06□□□□□ -0.48
COL1A1-203ENST00000471344 CNTFRP26992 372 aa12.06□□□□□ -0.48
COL1A1-203ENST00000471344 OR3A3P47888 321 aa12.06□□□□□ -0.48
COL1A1-203ENST00000471344 P2RY14Q15391 338 aa12.06□□□□□ -0.48
COL1A1-203ENST00000471344 DEFB136Q30KP8 78 aa12.06□□□□□ -0.48
COL1A1-203ENST00000471344 HSD17B12Q53GQ0 312 aa12.06□□□□□ -0.48
COL1A1-203ENST00000471344 PHYHIPQ92561 330 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms