RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 KRBOX4Q5JUW0 171 aa14.59□□□□□ -0.07
HSPG2-208ENST00000471322 DTX2Q86UW9 622 aa14.59□□□□□ -0.07
HSPG2-208ENST00000471322 CMTM1Q8IZ96 169 aa14.59□□□□□ -0.07
HSPG2-208ENST00000471322 GRPEL2Q8TAA5 225 aa14.59□□□□□ -0.07
HSPG2-208ENST00000471322 MS4A5Q9H3V2 200 aa14.59□□□□□ -0.07
HSPG2-208ENST00000471322 METTL8Q9H825 291 aaKnown RBP14.59□□□□□ -0.07
HSPG2-208ENST00000471322 IGKV1D-17A0A075B6S4 117 aa14.58□□□□□ -0.08
HSPG2-208ENST00000471322 C13orf42A0A1B0GVH6 325 aa14.58□□□□□ -0.08
HSPG2-208ENST00000471322 B9A039 149 aa14.58□□□□□ -0.08
HSPG2-208ENST00000471322 CCSO14618 274 aa14.58□□□□□ -0.08
HSPG2-208ENST00000471322 MGST3O14880 152 aa14.58□□□□□ -0.08
HSPG2-208ENST00000471322 MPPED1O15442 326 aa14.58□□□□□ -0.08
HSPG2-208ENST00000471322 HSPA12AO43301 675 aa14.58□□□□□ -0.08
HSPG2-208ENST00000471322 ZNF737O75373 536 aa14.58□□□□□ -0.08
HSPG2-208ENST00000471322 IFNA21P01568 189 aa14.58□□□□□ -0.08
HSPG2-208ENST00000471322 GABRA2P47869 451 aa14.58□□□□□ -0.08
HSPG2-208ENST00000471322 SRPXP78539 464 aa14.58□□□□□ -0.08
HSPG2-208ENST00000471322 AESQ08117 197 aa14.58□□□□□ -0.08
HSPG2-208ENST00000471322 MST1LQ2TV78 715 aa14.58□□□□□ -0.08
HSPG2-208ENST00000471322 PHLDA2Q53GA4 152 aa14.58□□□□□ -0.08
HSPG2-208ENST00000471322 SPRNQ5BIV9 151 aa14.58□□□□□ -0.08
HSPG2-208ENST00000471322 OR5D13Q8NGL4 314 aa14.58□□□□□ -0.08
HSPG2-208ENST00000471322 SECTM1Q8WVN6 248 aa14.58□□□□□ -0.08
HSPG2-208ENST00000471322 IL1F10Q8WWZ1 152 aa14.58□□□□□ -0.08
HSPG2-208ENST00000471322 GALMQ96C23 342 aa14.58□□□□□ -0.08
HSPG2-208ENST00000471322 WDR89Q96FK6 387 aaPredicted RBP14.58□□□□□ -0.08
HSPG2-208ENST00000471322 COQ2Q96H96 371 aa14.58□□□□□ -0.08
HSPG2-208ENST00000471322 SEC22AQ96IW7 307 aa14.58□□□□□ -0.08
HSPG2-208ENST00000471322 SHARPINQ9H0F6 387 aa14.58□□□□□ -0.08
HSPG2-208ENST00000471322 NCOR1P1Q9H4R4 102 aa14.58□□□□□ -0.08
HSPG2-208ENST00000471322 CBLN4Q9NTU7 201 aa14.58□□□□□ -0.08
HSPG2-208ENST00000471322 BEX4Q9NWD9 120 aaPredicted RBP14.58□□□□□ -0.08
HSPG2-208ENST00000471322 KIF25Q9UIL4 384 aa14.58□□□□□ -0.08
HSPG2-208ENST00000471322 FLNAP21333 2647 aaKnown RBP14.57□□□□□ -0.08
HSPG2-208ENST00000471322 HEXAP06865 529 aa14.57□□□□□ -0.08
HSPG2-208ENST00000471322 SLC25A4P12235 298 aa14.57□□□□□ -0.08
HSPG2-208ENST00000471322 MUC1P15941 1255 aaPredicted RBP14.57□□□□□ -0.08
HSPG2-208ENST00000471322 ATP5J2P56134 94 aa14.57□□□□□ -0.08
HSPG2-208ENST00000471322 SNRPD2P62316 118 aaKnown RBP14.57□□□□□ -0.08
HSPG2-208ENST00000471322 C11orf71Q6IPW1 123 aa14.57□□□□□ -0.08
HSPG2-208ENST00000471322 TMEM65Q6PI78 240 aa14.57□□□□□ -0.08
HSPG2-208ENST00000471322 LDLRAD3Q86YD5 345 aa14.57□□□□□ -0.08
HSPG2-208ENST00000471322 LRTM2Q8N967 370 aa14.57□□□□□ -0.08
HSPG2-208ENST00000471322 ANGPTL6Q8NI99 470 aa14.57□□□□□ -0.08
HSPG2-208ENST00000471322 FOXC2Q99958 501 aa14.57□□□□□ -0.08
HSPG2-208ENST00000471322 TEP1Q99973 2627 aaKnown RBP14.57□□□□□ -0.08
HSPG2-208ENST00000471322 PIGBOS1A0A0B4J2F0 54 aa14.56□□□□□ -0.08
HSPG2-208ENST00000471322 OVOL3O00110 214 aa14.56□□□□□ -0.08
HSPG2-208ENST00000471322 B3GALNT1O75752 331 aa14.56□□□□□ -0.08
HSPG2-208ENST00000471322 LUMP51884 338 aaPredicted RBP14.56□□□□□ -0.08
HSPG2-208ENST00000471322 TMEM187Q14656 261 aa14.56□□□□□ -0.08
HSPG2-208ENST00000471322 C5orf24Q7Z6I8 188 aa14.56□□□□□ -0.08
HSPG2-208ENST00000471322 C1orf87Q8N0U7 546 aa14.56□□□□□ -0.08
HSPG2-208ENST00000471322 LGI3Q8N145 548 aa14.56□□□□□ -0.08
HSPG2-208ENST00000471322 ZCCHC24Q8N2G6 241 aaKnown RBP14.56□□□□□ -0.08
HSPG2-208ENST00000471322 ZNF561Q8N587 486 aa14.56□□□□□ -0.08
HSPG2-208ENST00000471322 PPP1R1CQ8WVI7 109 aa14.56□□□□□ -0.08
HSPG2-208ENST00000471322 C2orf50Q96LR7 162 aa14.56□□□□□ -0.08
HSPG2-208ENST00000471322 FBXO9Q9UK97 447 aaPredicted RBP14.56□□□□□ -0.08
HSPG2-208ENST00000471322 ACANP16112 2415 aa14.56□□□□□ -0.08
HSPG2-208ENST00000471322 FXYD6-FXYD2A0A087WZ82 144 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 TRAV39A0A0B4J263 110 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 K7N7A8 449 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 L7N2F9 121 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 OR5AC1P0C628 307 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 GZMHP20718 246 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 IL2RGP31785 369 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 LIAT1Q6ZQX7 453 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 WFDC11Q8NEX6 87 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 OR10V1Q8NGI7 309 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 SDSLQ96GA7 329 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 AKR1E2Q96JD6 320 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 DNTTIP1Q9H147 329 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 DYNLRB1Q9NP97 96 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 METRNQ9UJH8 293 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 ARFGEF3Q5TH69 2177 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 ZANQ9Y493 2812 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 IGHV3OR15-7A0A075B7D8 119 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 IGKV1D-13A0A0B4J2D9 117 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 C3orf85A0A1B0GTC6 90 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 C12orf77C9JDV5 145 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 ADAP1O75689 374 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 LY6HO94772 140 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 IGKV1-13P0DP09 117 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 PSMB6P28072 239 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 CEACAM6P40199 344 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 CCL8P80075 99 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 HOXA4Q00056 320 aaPredicted RBP14.55□□□□□ -0.08
HSPG2-208ENST00000471322 SWI5Q1ZZU3 235 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 TEX36Q5VZQ5 186 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 C11orf87Q6NUJ2 197 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 PRR18Q8N4B5 295 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 BVESQ8NE79 360 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 THAP6Q8TBB0 222 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 TOLLIPQ9H0E2 274 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 FAM234AQ9H0X4 552 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 SAP30LQ9HAJ7 183 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 RAB9BQ9NP90 201 aa14.55□□□□□ -0.08
HSPG2-208ENST00000471322 F8P00451 2351 aa14.54□□□□□ -0.08
HSPG2-208ENST00000471322 TRAV14DV4A0A0A6YYC5 116 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms