RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 C7orf77A4D0Y5 90 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 TDGF1P3P51864 188 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 RAC3P60763 192 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 MMP25Q9NPA2 562 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 SIRT7Q9NRC8 400 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 TNFRSF18Q9Y5U5 241 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 hCG_38984A0A1B0GV85 526 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 LINC01387J3KSC0 135 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 RRHO14718 337 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 CTAG2O75638 210 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 PSG2P11465 335 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 FXYD3Q14802 87 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 CCDC144NLQ6NUI1 221 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 UNQ5815/PRO19632Q6UWF5 114 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 UNQ9370/PRO34162Q6UXP9 181 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 KIR3DL3Q8N743 410 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 ELSPBP1Q96BH3 223 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 TCRBV16S1A1N1A0A5B0 115 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 A8MWL6 223 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 SYNGR1O43759 233 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 EWSR1Q01844 656 aaKnown RBP eCLIP6.05□□□□□ -1.44
BRCA1-210ENST00000471181 SSPNQ14714 243 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 UBE2V2Q15819 145 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 CLEC2AQ6UVW9 174 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 FAM89BQ8N5H3 189 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 ANAPC13Q9BS18 74 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 MRPL20Q9BYC9 149 aaKnown RBP6.05□□□□□ -1.44
BRCA1-210ENST00000471181 SLC52A3Q9NQ40 469 aa6.05□□□□□ -1.44
BRCA1-210ENST00000471181 CEACAM18A8MTB9 384 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 ATXN7O15265 892 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-210ENST00000471181 HYAL3O43820 417 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-210ENST00000471181 GP1BAP07359 652 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 PCMT1P22061 227 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 GPR6P46095 362 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-210ENST00000471181 HCP5Q6MZN7 132 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 MAVSQ7Z434 540 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 KLHDC9Q8NEP7 349 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 OR2K2Q8NGT1 345 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 ZNF384Q8TF68 577 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 ZNF707Q96C28 371 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-210ENST00000471181 TRAF4Q9BUZ4 470 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-210ENST00000471181 OR5AC2Q9NZP5 309 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 UQCR10Q9UDW1 63 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 TINAGQ9UJW2 476 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 A0A1B0GTH9 108 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 LNP1A1A4G5 178 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 FAM74A7A6NL05 159 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 CDIPTO14735 213 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 FAM106CPP0CH98 169 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 HOXA6P31267 233 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 EFNB2P52799 333 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 RPL32P62910 135 aaKnown RBP6.04□□□□□ -1.44
BRCA1-210ENST00000471181 INSL4Q14641 139 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 C15orf39Q6ZRI6 1047 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 MRGPRGQ86SM5 289 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 MRGPRX1Q96LB2 322 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 ZNF48Q96MX3 618 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-210ENST00000471181 FRRS1LQ9P0K9 344 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 RCC2Q9P258 522 aaKnown RBP6.04□□□□□ -1.44
BRCA1-210ENST00000471181 IL19Q9UHD0 177 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 WIPI2Q9Y4P8 454 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 A0A1B0GV90 55 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 C17orf51A8MQB3 221 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 H3BRM9 83 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 S1PR2O95136 353 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 HLA-DRB1P01911 266 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 SMIM18P0DKX4 95 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 TSPOP30536 169 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 ATP5G2Q06055 141 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 FAM106AQ4KMX7 169 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 ZNF658BQ4V348 819 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-210ENST00000471181 TMEM177Q53S58 311 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 CADM4Q8NFZ8 388 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 SSC4DQ8WTU2 575 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 SCNM1Q9BWG6 230 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 MRPL18Q9H0U6 180 aaKnown RBP6.04□□□□□ -1.44
BRCA1-210ENST00000471181 SNED1Q8TER0 1413 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 EP400Q96L91 3159 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 ANKRD36CQ5JPF3 1778 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 TRAV8-4A0A0B4J246 113 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 NKX2-6A6NCS4 301 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 SNAI2O43623 268 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 CTSDP07339 412 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-210ENST00000471181 FAM3BP58499 235 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-210ENST00000471181 PSG9Q00887 426 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 PAX2Q02962 417 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 ACVR1Q04771 509 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 KLF9Q13886 244 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-210ENST00000471181 SPINK14Q6IE38 97 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 ASCL4Q6XD76 172 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 SRSF12Q8WXF0 261 aaKnown RBP6.04□□□□□ -1.44
BRCA1-210ENST00000471181 VGLL1Q99990 258 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 C4AP0C0L4 1744 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 C4BP0C0L5 1744 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 TRBV20OR9-2A0A075B6H5 130 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 IGHV3OR16-10A0A075B7F0 116 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 A1L4Q6 167 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 CEACAM4O75871 244 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 APOMO95445 188 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 RAE1P78406 368 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms