RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 LCN12Q6JVE5 192 aa3.34□□□□□ -1.87
PRPF40A-206ENST00000471167 CLEC19AQ6UXS0 136 aa3.34□□□□□ -1.87
PRPF40A-206ENST00000471167 GOLT1AQ6ZVE7 132 aa3.34□□□□□ -1.87
PRPF40A-206ENST00000471167 TCF24Q7RTU0 167 aa3.34□□□□□ -1.87
PRPF40A-206ENST00000471167 ZNF550Q7Z398 422 aa3.34□□□□□ -1.87
PRPF40A-206ENST00000471167 OOSP2Q86WS3 158 aa3.34□□□□□ -1.87
PRPF40A-206ENST00000471167 OR11H7Q8NGC8 314 aa3.34□□□□□ -1.87
PRPF40A-206ENST00000471167 OR2T4Q8NH00 348 aa3.34□□□□□ -1.87
PRPF40A-206ENST00000471167 C1orf54Q8WWF1 131 aa3.34□□□□□ -1.87
PRPF40A-206ENST00000471167 GEMIN6Q8WXD5 167 aaKnown RBP3.34□□□□□ -1.87
PRPF40A-206ENST00000471167 TMEM203Q969S6 136 aa3.34□□□□□ -1.87
PRPF40A-206ENST00000471167 SIGLEC12Q96PQ1 595 aa3.34□□□□□ -1.87
PRPF40A-206ENST00000471167 SPACA5Q96QH8 159 aa3.34□□□□□ -1.87
PRPF40A-206ENST00000471167 TCEAL7Q9BRU2 100 aa3.34□□□□□ -1.87
PRPF40A-206ENST00000471167 LCE3DQ9BYE3 92 aa3.34□□□□□ -1.87
PRPF40A-206ENST00000471167 RNASE7Q9H1E1 156 aaKnown RBP3.34□□□□□ -1.87
PRPF40A-206ENST00000471167 SRMSQ9H3Y6 488 aa3.34□□□□□ -1.87
PRPF40A-206ENST00000471167 EDA2RQ9HAV5 297 aa3.34□□□□□ -1.87
PRPF40A-206ENST00000471167 ZNF226Q9NYT6 803 aa3.34□□□□□ -1.87
PRPF40A-206ENST00000471167 PRNDQ9UKY0 176 aa3.34□□□□□ -1.87
PRPF40A-206ENST00000471167 HDGFL3Q9Y3E1 203 aa3.34□□□□□ -1.87
PRPF40A-206ENST00000471167 VWA8A3KMH1 1905 aa3.34□□□□□ -1.88
PRPF40A-206ENST00000471167 CAMTA1Q9Y6Y1 1673 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 IGHV3-35A0A0C4DH35 117 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 A0A1B0GV50 99 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 hADV38S2A0JD32 116 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 FAM25AB3EWG3 89 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 FAM25CB3EWG5 89 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 FAM25GB3EWG6 89 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 TXNDC9O14530 226 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 GCM2O75603 506 aaPredicted RBP3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 HBZP02008 142 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 C1QCP02747 245 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 SMIM6P0DI80 62 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 NELFEP18615 380 aaKnown RBP3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 RAB3BP20337 219 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 DDTP30046 118 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 CD70P32970 193 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 CCL23P55773 120 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 C1QTNF8P60827 252 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 ELF3P78545 371 aaPredicted RBP3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 ZNF616Q08AN1 781 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 FZD2Q14332 565 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 IAH1Q2TAA2 248 aaPredicted RBP3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 C2orf83Q53S99 150 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 FAM201AQ5SY85 155 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 KDM4DQ6B0I6 523 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 UNQ9370/PRO34162Q6UXP9 181 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 SCGB1D4Q6XE38 83 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 TEX43Q6ZNM6 134 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 LRRC28Q86X40 367 aaPredicted RBP3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 UMODL1-AS1Q8N2C9 162 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 ZCCHC24Q8N2G6 241 aaKnown RBP3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 ZNF525Q8N782 197 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 OR4D11Q8NGI4 311 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 OR10G4Q8NGN3 311 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 OR4K15Q8NH41 348 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 ZNF420Q8TAQ5 688 aaPredicted RBP3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 GNPDA2Q8TDQ7 276 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 TMEM159Q96B96 161 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 TM4SF18Q96CE8 201 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 GALNT14Q96FL9 552 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 SMIM8Q96KF7 97 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 BMFQ96LC9 184 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 GGACTQ9BVM4 153 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 GABARAPL3Q9BY60 117 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 GNB1LQ9BYB4 327 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 HEBP1Q9NRV9 189 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 LYRM2Q9NU23 88 aaPredicted RBP3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 UQCC1Q9NVA1 299 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 RBFOX1Q9NWB1 397 aaKnown RBP3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 MED29Q9NX70 200 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 RSL24D1Q9UHA3 163 aaKnown RBP3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 SIGLEC7Q9Y286 467 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 BTRCQ9Y297 605 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 UGT2A1Q9Y4X1 527 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 WRNQ14191 1432 aaPredicted RBP eCLIP3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 GRIN2BQ13224 1484 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 MYO15BQ96JP2 1530 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 TMEM131Q92545 1883 aa3.33□□□□□ -1.88
PRPF40A-206ENST00000471167 IGHV1OR15-1A0A075B7D0 117 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 MYBPHLA2RUH7 354 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 C5orf49A4QMS7 147 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 UPK2O00526 184 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 DEGS1O15121 323 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 TPST1O60507 370 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 MMP23AO75900 390 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 KCNK2O95069 426 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 CDRT1O95170 752 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 CCNE2O96020 404 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 IFNGP01579 166 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 C1QBP02746 253 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 ELK1P19419 428 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 CD200P41217 278 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 EBPQ15125 230 aaKnown RBP3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 CENPWQ5EE01 88 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 TMEM236Q5W0B7 351 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 OR11H6Q8NGC7 330 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 JOSD2Q8TAC2 188 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 CCL17Q92583 94 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms