RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 ZNF286AQ9HBT8 521 aa10.28□□□□□ -0.76
SPTLC1-204ENST00000469778 MEX3AA1L020 520 aaKnown RBP10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 A6NHS1 94 aa10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 CLDN34H7C241 214 aa10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 CTDSP2O14595 271 aa10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 FABP7O15540 132 aa10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 TCF21O43680 179 aa10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 HLA-DQB1P01920 261 aa10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 LPLP06858 475 aa10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 IL3RAP26951 378 aa10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 S100A5P33763 92 aa10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 SAA4P35542 130 aa10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 RIPPLY3P57055 190 aa10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 MADCAM1Q13477 382 aa10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 MORN2Q502X0 79 aa10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 CNIH2Q6PI25 160 aa10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 BRD3OSQ6XYD6 125 aa10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 LINC00299Q6ZSB3 139 aa10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 HOGA1Q86XE5 327 aa10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 LDLRAD3Q86YD5 345 aa10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 OR1L1Q8NH94 360 aa10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 ZDHHC16Q969W1 377 aa10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 HDHD3Q9BSH5 251 aaPredicted RBP10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 C6orf62Q9GZU0 229 aaPredicted RBP10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 MMP28Q9H239 520 aa10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 DPAGT1Q9H3H5 408 aa10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 OCEL1Q9H607 264 aa10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 PSG11Q9UQ72 335 aa10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 POMT1Q9Y6A1 747 aa10.27□□□□□ -0.77
SPTLC1-204ENST00000469778 MXRA5Q9NR99 2828 aa10.26□□□□□ -0.77
SPTLC1-204ENST00000469778 VGLL3A8MV65 326 aa10.26□□□□□ -0.77
SPTLC1-204ENST00000469778 BUB1B-PAK6H3BSN5 160 aa10.26□□□□□ -0.77
SPTLC1-204ENST00000469778 HSPA12AO43301 675 aa10.26□□□□□ -0.77
SPTLC1-204ENST00000469778 PTBP1P26599 531 aaKnown RBP eCLIP10.26□□□□□ -0.77
SPTLC1-204ENST00000469778 RAB7AP51149 207 aa10.26□□□□□ -0.77
SPTLC1-204ENST00000469778 DYNLT3P51808 116 aa10.26□□□□□ -0.77
SPTLC1-204ENST00000469778 SSBP1Q04837 148 aaKnown RBP10.26□□□□□ -0.77
SPTLC1-204ENST00000469778 KLRD1Q13241 179 aa10.26□□□□□ -0.77
SPTLC1-204ENST00000469778 HLA-DRB5Q30154 266 aa10.26□□□□□ -0.77
SPTLC1-204ENST00000469778 PYHIN1Q6K0P9 492 aa10.26□□□□□ -0.77
SPTLC1-204ENST00000469778 Q6YL49 198 aa10.26□□□□□ -0.77
SPTLC1-204ENST00000469778 SLC25A48Q6ZT89 311 aaKnown RBP10.26□□□□□ -0.77
SPTLC1-204ENST00000469778 PRR18Q8N4B5 295 aa10.26□□□□□ -0.77
SPTLC1-204ENST00000469778 OR4P4Q8NGL7 312 aa10.26□□□□□ -0.77
SPTLC1-204ENST00000469778 OR5R1Q8NH85 324 aa10.26□□□□□ -0.77
SPTLC1-204ENST00000469778 OR10J5Q8NHC4 309 aa10.26□□□□□ -0.77
SPTLC1-204ENST00000469778 ZFAND2BQ8WV99 257 aa10.26□□□□□ -0.77
SPTLC1-204ENST00000469778 SSMEM1Q8WWF3 244 aa10.26□□□□□ -0.77
SPTLC1-204ENST00000469778 IL1F10Q8WWZ1 152 aa10.26□□□□□ -0.77
SPTLC1-204ENST00000469778 DIRAS2Q96HU8 199 aa10.26□□□□□ -0.77
SPTLC1-204ENST00000469778 ST6GALNAC5Q9BVH7 336 aa10.26□□□□□ -0.77
SPTLC1-204ENST00000469778 EXTL2Q9UBQ6 330 aa10.26□□□□□ -0.77
SPTLC1-204ENST00000469778 ANXA10Q9UJ72 324 aa10.26□□□□□ -0.77
SPTLC1-204ENST00000469778 MRPS7Q9Y2R9 242 aaKnown RBP10.26□□□□□ -0.77
SPTLC1-204ENST00000469778 IGHV3OR16-10A0A075B7F0 116 aa10.25□□□□□ -0.77
SPTLC1-204ENST00000469778 TRBV6-7A0A0A0MS04 114 aa10.25□□□□□ -0.77
SPTLC1-204ENST00000469778 A0A0U1RQK1 487 aa10.25□□□□□ -0.77
SPTLC1-204ENST00000469778 LY6LH3BQJ8 138 aa10.25□□□□□ -0.77
SPTLC1-204ENST00000469778 TXNL1O43396 289 aa10.25□□□□□ -0.77
SPTLC1-204ENST00000469778 SSX5O60225 188 aa10.25□□□□□ -0.77
SPTLC1-204ENST00000469778 SCTP09683 121 aa10.25□□□□□ -0.77
SPTLC1-204ENST00000469778 NAT1P18440 290 aa10.25□□□□□ -0.77
SPTLC1-204ENST00000469778 GDNFP39905 211 aa10.25□□□□□ -0.77
SPTLC1-204ENST00000469778 ZNF137PP52743 207 aa10.25□□□□□ -0.77
SPTLC1-204ENST00000469778 TAS2R46P59540 309 aa10.25□□□□□ -0.77
SPTLC1-204ENST00000469778 HILS1P60008 231 aa10.25□□□□□ -0.77
SPTLC1-204ENST00000469778 DEFB112Q30KQ8 113 aa10.25□□□□□ -0.77
SPTLC1-204ENST00000469778 RUSC1-AS1Q66K80 236 aa10.25□□□□□ -0.77
SPTLC1-204ENST00000469778 Q6ZPA2 131 aa10.25□□□□□ -0.77
SPTLC1-204ENST00000469778 PDZD9Q8IXQ8 264 aa10.25□□□□□ -0.77
SPTLC1-204ENST00000469778 OR2AK2Q8NG84 335 aa10.25□□□□□ -0.77
SPTLC1-204ENST00000469778 OR10X1Q8NGY0 326 aa10.25□□□□□ -0.77
SPTLC1-204ENST00000469778 GPX8Q8TED1 209 aa10.25□□□□□ -0.77
SPTLC1-204ENST00000469778 NUDCD2Q8WVJ2 157 aa10.25□□□□□ -0.77
SPTLC1-204ENST00000469778 SLC6A7Q99884 636 aa10.25□□□□□ -0.77
SPTLC1-204ENST00000469778 DCUN1D5Q9BTE7 237 aa10.25□□□□□ -0.77
SPTLC1-204ENST00000469778 CABLES2Q9BTV7 478 aa10.25□□□□□ -0.77
SPTLC1-204ENST00000469778 SLC23A1Q9UHI7 598 aa10.25□□□□□ -0.77
SPTLC1-204ENST00000469778 ZNF107Q9UII5 783 aaPredicted RBP10.25□□□□□ -0.77
SPTLC1-204ENST00000469778 BTBD17A6NE02 478 aa10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 GABARAPH6UMI1 98 aa10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 CTDSPLO15194 276 aa10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 GAPDHP04406 335 aaKnown RBP10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 GSTT2P0CG29 244 aa10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 GSTT2BP0CG30 244 aa10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 BRS3P32247 399 aa10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 TNFSF8P32971 234 aa10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 CEACAM6P40199 344 aa10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 DLX1P56177 255 aa10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 ACTBP60709 375 aa10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 RPL15P61313 204 aaKnown RBP10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 ACTG1P63261 375 aa10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 LTC4SQ16873 150 aa10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 FAM71F2Q6NXP2 309 aa10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 LAX1Q8IWV1 398 aa10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 BCL6BQ8N143 479 aaPredicted RBP10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 OR8H3Q8N146 312 aa10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 SIGLECL1Q8N7X8 197 aa10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 DTX3Q8N9I9 347 aa10.24□□□□□ -0.77
SPTLC1-204ENST00000469778 ZNF439Q8NDP4 499 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms