RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 PSG2P11465 335 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 SERPINA2P20848 420 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 CRHBPP24387 322 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 GABRA5P31644 462 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 PMELP40967 661 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 PTGFRP43088 359 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 KCNJ3P48549 501 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 SNU13P55769 128 aaKnown RBP5.09□□□□□ -1.59
PTCD3-208ENST00000469585 FGF12P61328 243 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 ACTG1P63261 375 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 SLC35A2P78381 396 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 MEF2CQ06413 473 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-208ENST00000469585 KRTAP1-1Q07627 177 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 EDDM3AQ14507 147 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 ACSM3Q53FZ2 586 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 PAN3Q58A45 887 aaKnown RBP5.09□□□□□ -1.59
PTCD3-208ENST00000469585 SPRNQ5BIV9 151 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 DMRTC1Q5HYR2 192 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 ATAD3CQ5T2N8 411 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 LIPKQ5VXJ0 399 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 STUMQ69YW2 141 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 DMKNQ6E0U4 476 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-208ENST00000469585 OR52W1Q6IF63 320 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 IL17RELQ6ZVW7 336 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 CEACAM19Q7Z692 300 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 CALHM1Q8IU99 346 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 OR8H2Q8N162 312 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 OSR2Q8N2R0 312 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 FAM216BQ8N7L0 139 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 ZFP41Q8N8Y5 198 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 PXT1Q8NFP0 134 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 OR51A4Q8NGJ6 313 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 OR13D1Q8NGV5 346 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 ANGPTL6Q8NI99 470 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 SECTM1Q8WVN6 248 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 CREB3L1Q96BA8 519 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 MRPS24Q96EL2 167 aaKnown RBP5.09□□□□□ -1.59
PTCD3-208ENST00000469585 SDSLQ96GA7 329 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 NEDD4LQ96PU5 975 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 MGLLQ99685 303 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 UQCC2Q9BRT2 126 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 URM1Q9BTM9 101 aaKnown RBP5.09□□□□□ -1.59
PTCD3-208ENST00000469585 WDR13Q9H1Z4 485 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 DPAGT1Q9H3H5 408 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 ABCB10Q9NRK6 738 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 DCAF16Q9NXF7 216 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 CLEC2DQ9UHP7 191 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 SSR3Q9UNL2 185 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 MRPS28Q9Y2Q9 187 aaKnown RBP5.09□□□□□ -1.59
PTCD3-208ENST00000469585 LRRC42Q9Y546 428 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 CHD3Q12873 2000 aaKnown RBP5.08□□□□□ -1.6
PTCD3-208ENST00000469585 A0A087WXM4 84 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 RNF212BA8MTL3 300 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 MCRIP1C9JLW8 97 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 E9PI62 339 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 SIRPB1O00241 398 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 CCRL2O00421 344 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 TOR1AO14656 332 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 ANGPTL7O43827 346 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 NOL3O60936 208 aaKnown RBP5.08□□□□□ -1.6
PTCD3-208ENST00000469585 OR7C1O76099 320 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-208ENST00000469585 FBP1P09467 338 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 ADRA2CP18825 462 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 SRMP19623 302 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 BCL3P20749 454 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 ARF6P62330 175 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 MPV17LQ2QL34 196 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 SLC22A6Q4U2R8 563 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 DHRS7BQ6IAN0 325 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-208ENST00000469585 TRAT1Q6PIZ9 186 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 LYPD2Q6UXB3 125 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 WDR86Q86TI4 376 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 C11orf53Q8IXP5 236 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 GBGT1Q8N5D6 347 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 ZNRF1Q8ND25 227 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 LHX4Q969G2 390 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 ZNF714Q96N38 554 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 GAFA1Q96PS6 74 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 SPACA5Q96QH8 159 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 DCTN5Q9BTE1 182 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 MMP27Q9H306 513 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 CHMP1AQ9HD42 196 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-208ENST00000469585 HMG20AQ9NP66 347 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 FKBP14Q9NWM8 211 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 KCNIP1Q9NZI2 227 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 ZNF580Q9UK33 172 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 ABCA1O95477 2261 aa5.08□□□□□ -1.6
PTCD3-208ENST00000469585 CR1P17927 2039 aa5.07□□□□□ -1.6
PTCD3-208ENST00000469585 IGKV1D-17A0A075B6S4 117 aa5.07□□□□□ -1.6
PTCD3-208ENST00000469585 TRBV5-5A0A0J9YX44 114 aa5.07□□□□□ -1.6
PTCD3-208ENST00000469585 A0A1W2PPK0 400 aa5.07□□□□□ -1.6
PTCD3-208ENST00000469585 A0A1W2PS18 150 aa5.07□□□□□ -1.6
PTCD3-208ENST00000469585 K7N7A8 449 aa5.07□□□□□ -1.6
PTCD3-208ENST00000469585 SCGNO76038 276 aa5.07□□□□□ -1.6
PTCD3-208ENST00000469585 OR2H2O95918 312 aa5.07□□□□□ -1.6
PTCD3-208ENST00000469585 RBP4P02753 201 aa5.07□□□□□ -1.6
PTCD3-208ENST00000469585 GALP22466 123 aa5.07□□□□□ -1.6
PTCD3-208ENST00000469585 GADD45AP24522 165 aa5.07□□□□□ -1.6
PTCD3-208ENST00000469585 CALRP27797 417 aaKnown RBP5.07□□□□□ -1.6
PTCD3-208ENST00000469585 HTR2CP28335 458 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms