RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 KCNJ16Q9NPI9 418 aa15.11■□□□□ 0.01
MCF2L-221ENST00000469415 TAAR3PQ9P1P4 343 aa15.11■□□□□ 0.01
MCF2L-221ENST00000469415 A0A1W2PPE2 198 aa15.11■□□□□ 0.01
MCF2L-221ENST00000469415 HMGB3O15347 200 aaKnown RBP15.11■□□□□ 0.01
MCF2L-221ENST00000469415 KRASP01116 189 aa15.11■□□□□ 0.01
MCF2L-221ENST00000469415 SEC11BP0C7V7 166 aa15.11■□□□□ 0.01
MCF2L-221ENST00000469415 OR3A1P47881 315 aa15.11■□□□□ 0.01
MCF2L-221ENST00000469415 ZNF816Q0VGE8 651 aaPredicted RBP15.11■□□□□ 0.01
MCF2L-221ENST00000469415 EDDM3AQ14507 147 aa15.11■□□□□ 0.01
MCF2L-221ENST00000469415 SLC16A13Q7RTY0 426 aa15.11■□□□□ 0.01
MCF2L-221ENST00000469415 OR10V1Q8NGI7 309 aa15.11■□□□□ 0.01
MCF2L-221ENST00000469415 OR1L1Q8NH94 360 aa15.11■□□□□ 0.01
MCF2L-221ENST00000469415 NANPQ8TBE9 248 aa15.11■□□□□ 0.01
MCF2L-221ENST00000469415 SPIN2AQ99865 258 aa15.11■□□□□ 0.01
MCF2L-221ENST00000469415 SPIN2BQ9BPZ2 258 aa15.11■□□□□ 0.01
MCF2L-221ENST00000469415 RTL8AQ9BWD3 113 aa15.11■□□□□ 0.01
MCF2L-221ENST00000469415 PLEKHF2Q9H8W4 249 aa15.11■□□□□ 0.01
MCF2L-221ENST00000469415 DUSP13Q9UII6 198 aa15.11■□□□□ 0.01
MCF2L-221ENST00000469415 hCG_1809904A0A1W2PP81 198 aa15.1■□□□□ 0.01
MCF2L-221ENST00000469415 A0A1W2PR64 198 aa15.1■□□□□ 0.01
MCF2L-221ENST00000469415 A0A1W2PRV1 198 aa15.1■□□□□ 0.01
MCF2L-221ENST00000469415 RBMXL2O75526 392 aaKnown RBP15.1■□□□□ 0.01
MCF2L-221ENST00000469415 ZNF324BQ6AW86 544 aaPredicted RBP15.1■□□□□ 0.01
MCF2L-221ENST00000469415 PLSCR2Q9NRY7 297 aa15.1■□□□□ 0.01
MCF2L-221ENST00000469415 A0A1W2PPH5 198 aa15.1■□□□□ 0.01
MCF2L-221ENST00000469415 C7orf77A4D0Y5 90 aa15.1■□□□□ 0.01
MCF2L-221ENST00000469415 OR5B21A6NL26 309 aa15.1■□□□□ 0.01
MCF2L-221ENST00000469415 J3QT63 122 aa15.1■□□□□ 0.01
MCF2L-221ENST00000469415 GABRA2P47869 451 aa15.1■□□□□ 0.01
MCF2L-221ENST00000469415 OR2B8PP59922 312 aa15.1■□□□□ 0.01
MCF2L-221ENST00000469415 SPANXN5Q5MJ07 72 aa15.1■□□□□ 0.01
MCF2L-221ENST00000469415 FAM24BQ8N5W8 94 aa15.1■□□□□ 0.01
MCF2L-221ENST00000469415 OR52L2PQ8NGH6 319 aa15.1■□□□□ 0.01
MCF2L-221ENST00000469415 TMEM56Q96MV1 263 aa15.1■□□□□ 0.01
MCF2L-221ENST00000469415 GINS3Q9BRX5 216 aa15.1■□□□□ 0.01
MCF2L-221ENST00000469415 FAM234AQ9H0X4 552 aa15.1■□□□□ 0.01
MCF2L-221ENST00000469415 URGCP-MRPS24S4R325 110 aa15.1■□□□□ 0.01
MCF2L-221ENST00000469415 TMEM56-RWDD3S4R434 201 aa15.1■□□□□ 0.01
MCF2L-221ENST00000469415 COX5BP10606 129 aa15.09■□□□□ 0.01
MCF2L-221ENST00000469415 FGF8P55075 233 aaPredicted RBP15.09■□□□□ 0.01
MCF2L-221ENST00000469415 NMSQ5H8A3 153 aa15.09■□□□□ 0.01
MCF2L-221ENST00000469415 DHRS7BQ6IAN0 325 aaPredicted RBP15.09■□□□□ 0.01
MCF2L-221ENST00000469415 OR8G2PQ6IF36 304 aa15.09■□□□□ 0.01
MCF2L-221ENST00000469415 MRGPRDQ8TDS7 321 aa15.09■□□□□ 0.01
MCF2L-221ENST00000469415 UCP1P25874 307 aa15.09■□□□□ 0.01
MCF2L-221ENST00000469415 HOXC12P31275 282 aa15.09■□□□□ 0.01
MCF2L-221ENST00000469415 UCP2P55851 309 aa15.09■□□□□ 0.01
MCF2L-221ENST00000469415 TGFBR3Q03167 851 aa15.09■□□□□ 0.01
MCF2L-221ENST00000469415 ADAM5Q6NVV9 412 aa15.09■□□□□ 0.01
MCF2L-221ENST00000469415 ODF3L1Q8IXM7 274 aa15.09■□□□□ 0.01
MCF2L-221ENST00000469415 KLF14Q8TD94 323 aaPredicted RBP15.09■□□□□ 0.01
MCF2L-221ENST00000469415 S100GP29377 79 aa15.09■□□□□ 0.01
MCF2L-221ENST00000469415 LCN15Q6UWW0 184 aa15.09■□□□□ 0.01
MCF2L-221ENST00000469415 LILRB2Q8N423 598 aa15.09■□□□□ 0.01
MCF2L-221ENST00000469415 RNF122Q9H9V4 155 aa15.09■□□□□ 0.01
MCF2L-221ENST00000469415 METRNQ9UJH8 293 aa15.09■□□□□ 0.01
MCF2L-221ENST00000469415 IGKV1-39P01597 117 aa15.08■□□□□ 0
MCF2L-221ENST00000469415 IGKV1D-39P04432 117 aa15.08■□□□□ 0
MCF2L-221ENST00000469415 MRPL49Q13405 166 aaKnown RBP15.08■□□□□ 0
MCF2L-221ENST00000469415 Q6P435 159 aa15.08■□□□□ 0
MCF2L-221ENST00000469415 BEND4Q6ZU67 534 aa15.08■□□□□ 0
MCF2L-221ENST00000469415 C9orf106Q8NAJ2 232 aa15.08■□□□□ 0
MCF2L-221ENST00000469415 LYRM2Q9NU23 88 aaPredicted RBP15.08■□□□□ 0
MCF2L-221ENST00000469415 NDRG3Q9UGV2 375 aa15.08■□□□□ 0
MCF2L-221ENST00000469415 MUC6Q6W4X9 2439 aa15.08■□□□□ 0
MCF2L-221ENST00000469415 ZNF727A8MUV8 499 aa15.08■□□□□ 0
MCF2L-221ENST00000469415 TIMM8AO60220 97 aaPredicted RBP15.08■□□□□ 0
MCF2L-221ENST00000469415 H2AFB1P0C5Y9 115 aa15.08■□□□□ 0
MCF2L-221ENST00000469415 ELLP55199 621 aaPredicted RBP15.08■□□□□ 0
MCF2L-221ENST00000469415 SRPXP78539 464 aa15.08■□□□□ 0
MCF2L-221ENST00000469415 IL24Q13007 206 aa15.08■□□□□ 0
MCF2L-221ENST00000469415 FAM185AQ8N0U4 392 aa15.08■□□□□ 0
MCF2L-221ENST00000469415 Q8NFD4 153 aa15.08■□□□□ 0
MCF2L-221ENST00000469415 OPN3Q9H1Y3 402 aaPredicted RBP15.08■□□□□ 0
MCF2L-221ENST00000469415 TREM2Q9NZC2 230 aa15.08■□□□□ 0
MCF2L-221ENST00000469415 KIAA1324LA8MWY0 1029 aaPredicted RBP15.07■□□□□ 0
MCF2L-221ENST00000469415 FAM157AC9JC47 383 aa15.07■□□□□ 0
MCF2L-221ENST00000469415 RAMP3O60896 148 aa15.07■□□□□ 0
MCF2L-221ENST00000469415 ZNF14P17017 642 aaPredicted RBP15.07■□□□□ 0
MCF2L-221ENST00000469415 TESK1Q15569 626 aa15.07■□□□□ 0
MCF2L-221ENST00000469415 C10orf91Q5T1B1 145 aa15.07■□□□□ 0
MCF2L-221ENST00000469415 AKR1C8PQ5T2L2 129 aa15.07■□□□□ 0
MCF2L-221ENST00000469415 AVPI1Q5T686 147 aa15.07■□□□□ 0
MCF2L-221ENST00000469415 SAXO1Q8IYX7 474 aa15.07■□□□□ 0
MCF2L-221ENST00000469415 NUDT19A8MXV4 375 aa15.07■□□□□ 0
MCF2L-221ENST00000469415 SS18L1O75177 396 aaPredicted RBP15.07■□□□□ 0
MCF2L-221ENST00000469415 PAX9P55771 341 aa15.07■□□□□ 0
MCF2L-221ENST00000469415 ZNF266Q14584 549 aa15.07■□□□□ 0
MCF2L-221ENST00000469415 H1FOOQ8IZA3 346 aaPredicted RBP15.07■□□□□ 0
MCF2L-221ENST00000469415 SLC25A31Q9H0C2 315 aa15.07■□□□□ 0
MCF2L-221ENST00000469415 VSIRQ9H7M9 311 aa15.07■□□□□ 0
MCF2L-221ENST00000469415 PRELID3BQ9Y3B1 194 aa15.07■□□□□ 0
MCF2L-221ENST00000469415 FAM90A10PA6NDY2 464 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 FAM90A18PA6NE21 464 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 FAM90A16PA6NEW6 464 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 FAM90A20PA6NIJ5 464 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 FAM90A8PA6NJQ4 464 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 FAM90A7PA6NKC0 464 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 ZFP92A6NM28 416 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 FAM90A22PA8MWA6 464 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms