RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 FAM27D1Q5T7N8 215 aa17.18■□□□□ 0.34
TTC28-204ENST00000468807 LYPD6Q86Y78 171 aa17.18■□□□□ 0.34
TTC28-204ENST00000468807 MRPL41Q8IXM3 137 aaKnown RBP17.18■□□□□ 0.34
TTC28-204ENST00000468807 Q8N6K4 173 aa17.18■□□□□ 0.34
TTC28-204ENST00000468807 Q8N9W7 124 aa17.18■□□□□ 0.34
TTC28-204ENST00000468807 ZNF439Q8NDP4 499 aa17.18■□□□□ 0.34
TTC28-204ENST00000468807 ABCG5Q9H222 651 aa17.18■□□□□ 0.34
TTC28-204ENST00000468807 LIN7CQ9NUP9 197 aaKnown RBP17.18■□□□□ 0.34
TTC28-204ENST00000468807 FKBP14Q9NWM8 211 aa17.18■□□□□ 0.34
TTC28-204ENST00000468807 HOXD3P31249 432 aaPredicted RBP17.17■□□□□ 0.34
TTC28-204ENST00000468807 THBS3P49746 956 aa17.17■□□□□ 0.34
TTC28-204ENST00000468807 RBM48Q5RL73 367 aaKnown RBP17.17■□□□□ 0.34
TTC28-204ENST00000468807 SIGIRRQ6IA17 410 aa17.17■□□□□ 0.34
TTC28-204ENST00000468807 ETV3LQ6ZN32 361 aa17.17■□□□□ 0.34
TTC28-204ENST00000468807 OR52L2PQ8NGH6 319 aa17.17■□□□□ 0.34
TTC28-204ENST00000468807 DPF1Q92782 380 aa17.17■□□□□ 0.34
TTC28-204ENST00000468807 S1PR3Q99500 378 aa17.17■□□□□ 0.34
TTC28-204ENST00000468807 ZFP57Q9NU63 452 aa17.17■□□□□ 0.34
TTC28-204ENST00000468807 GHRLQ9UBU3 117 aa17.17■□□□□ 0.34
TTC28-204ENST00000468807 SC5DO75845 299 aa17.16■□□□□ 0.34
TTC28-204ENST00000468807 GLAP06280 429 aa17.16■□□□□ 0.34
TTC28-204ENST00000468807 CDK1P06493 297 aa17.16■□□□□ 0.34
TTC28-204ENST00000468807 GNMTQ14749 295 aa17.16■□□□□ 0.34
TTC28-204ENST00000468807 GLT8D1Q68CQ7 371 aa17.16■□□□□ 0.34
TTC28-204ENST00000468807 OR10K2Q6IF99 312 aa17.16■□□□□ 0.34
TTC28-204ENST00000468807 TEX38Q6PEX7 206 aa17.16■□□□□ 0.34
TTC28-204ENST00000468807 C5orf24Q7Z6I8 188 aa17.16■□□□□ 0.34
TTC28-204ENST00000468807 GAPTQ8N292 157 aa17.16■□□□□ 0.34
TTC28-204ENST00000468807 MS4A15Q8N5U1 240 aa17.16■□□□□ 0.34
TTC28-204ENST00000468807 COMMD1Q8N668 190 aa17.16■□□□□ 0.34
TTC28-204ENST00000468807 NEDD4LQ96PU5 975 aa17.16■□□□□ 0.34
TTC28-204ENST00000468807 H0YHG0 523 aa17.15■□□□□ 0.34
TTC28-204ENST00000468807 UBBP0CG47 229 aa17.15■□□□□ 0.34
TTC28-204ENST00000468807 PPP1CCP36873 323 aaKnown RBP17.15■□□□□ 0.34
TTC28-204ENST00000468807 RAB25P57735 213 aa17.15■□□□□ 0.34
TTC28-204ENST00000468807 MED22Q15528 200 aa17.15■□□□□ 0.34
TTC28-204ENST00000468807 MRPL30Q8TCC3 161 aaKnown RBP17.15■□□□□ 0.34
TTC28-204ENST00000468807 DUX3Q96PT4 197 aa17.15■□□□□ 0.34
TTC28-204ENST00000468807 ABHD14AQ9BUJ0 271 aa17.15■□□□□ 0.34
TTC28-204ENST00000468807 GON7Q9BXV9 100 aa17.15■□□□□ 0.34
TTC28-204ENST00000468807 PLSCR3Q9NRY6 295 aa17.15■□□□□ 0.34
TTC28-204ENST00000468807 SCN3BQ9NY72 215 aa17.15■□□□□ 0.34
TTC28-204ENST00000468807 RRP9O43818 475 aaKnown RBP17.14■□□□□ 0.33
TTC28-204ENST00000468807 ZNF137PP52743 207 aa17.14■□□□□ 0.33
TTC28-204ENST00000468807 F2RL1P55085 397 aa17.14■□□□□ 0.33
TTC28-204ENST00000468807 KRTAP10-11P60412 298 aa17.14■□□□□ 0.33
TTC28-204ENST00000468807 SPHARQ15513 63 aa17.14■□□□□ 0.33
TTC28-204ENST00000468807 PNLIPRP3Q17RR3 467 aa17.14■□□□□ 0.33
TTC28-204ENST00000468807 MORN2Q502X0 79 aa17.14■□□□□ 0.33
TTC28-204ENST00000468807 DEFB121Q5J5C9 76 aa17.14■□□□□ 0.33
TTC28-204ENST00000468807 C6orf141Q5SZD1 244 aa17.14■□□□□ 0.33
TTC28-204ENST00000468807 CEACAM19Q7Z692 300 aa17.14■□□□□ 0.33
TTC28-204ENST00000468807 ZNF695Q8IW36 515 aa17.14■□□□□ 0.33
TTC28-204ENST00000468807 OR8H1Q8NGG4 311 aa17.14■□□□□ 0.33
TTC28-204ENST00000468807 HSPB9Q9BQS6 159 aa17.14■□□□□ 0.33
TTC28-204ENST00000468807 GPR61Q9BZJ8 451 aa17.14■□□□□ 0.33
TTC28-204ENST00000468807 MBNL3Q9NUK0 354 aaKnown RBP17.14■□□□□ 0.33
TTC28-204ENST00000468807 JPT1Q9UK76 154 aa17.14■□□□□ 0.33
TTC28-204ENST00000468807 K7EIL1 84 aa17.13■□□□□ 0.33
TTC28-204ENST00000468807 RPLP1P05386 114 aaKnown RBP17.13■□□□□ 0.33
TTC28-204ENST00000468807 VSIG8P0DPA2 414 aa17.13■□□□□ 0.33
TTC28-204ENST00000468807 SLC2A2P11168 524 aaPredicted RBP17.13■□□□□ 0.33
TTC28-204ENST00000468807 MYF6P23409 242 aa17.13■□□□□ 0.33
TTC28-204ENST00000468807 SLC6A1P30531 599 aa17.13■□□□□ 0.33
TTC28-204ENST00000468807 SOX6P35712 828 aa17.13■□□□□ 0.33
TTC28-204ENST00000468807 MYCNOSP40205 109 aa17.13■□□□□ 0.33
TTC28-204ENST00000468807 GP2P55259 537 aaKnown RBP17.13■□□□□ 0.33
TTC28-204ENST00000468807 LSAMPQ13449 338 aa17.13■□□□□ 0.33
TTC28-204ENST00000468807 HSD17B12Q53GQ0 312 aa17.13■□□□□ 0.33
TTC28-204ENST00000468807 CXorf66Q5JRM2 361 aaPredicted RBP17.13■□□□□ 0.33
TTC28-204ENST00000468807 UNQ9370/PRO34162Q6UXP9 181 aa17.13■□□□□ 0.33
TTC28-204ENST00000468807 LCNL1Q6ZST4 164 aa17.13■□□□□ 0.33
TTC28-204ENST00000468807 LRRTM1Q86UE6 522 aa17.13■□□□□ 0.33
TTC28-204ENST00000468807 SULT4A1Q9BR01 284 aa17.13■□□□□ 0.33
TTC28-204ENST00000468807 FAAP24Q9BTP7 215 aa17.13■□□□□ 0.33
TTC28-204ENST00000468807 TMEM59Q9BXS4 323 aa17.13■□□□□ 0.33
TTC28-204ENST00000468807 KCNK15Q9H427 330 aa17.13■□□□□ 0.33
TTC28-204ENST00000468807 CHMP1AQ9HD42 196 aaPredicted RBP17.13■□□□□ 0.33
TTC28-204ENST00000468807 LANCL1O43813 399 aa17.12■□□□□ 0.33
TTC28-204ENST00000468807 VDAC1P21796 283 aa17.12■□□□□ 0.33
TTC28-204ENST00000468807 MMDQ15546 238 aa17.12■□□□□ 0.33
TTC28-204ENST00000468807 RNLSQ5VYX0 342 aa17.12■□□□□ 0.33
TTC28-204ENST00000468807 STEAP3Q658P3 488 aa17.12■□□□□ 0.33
TTC28-204ENST00000468807 C6orf201Q7Z4U5 140 aa17.12■□□□□ 0.33
TTC28-204ENST00000468807 SETD6Q8TBK2 473 aa17.12■□□□□ 0.33
TTC28-204ENST00000468807 IL1F10Q8WWZ1 152 aa17.12■□□□□ 0.33
TTC28-204ENST00000468807 PHYHIPQ92561 330 aa17.12■□□□□ 0.33
TTC28-204ENST00000468807 GALMQ96C23 342 aa17.12■□□□□ 0.33
TTC28-204ENST00000468807 NKX1-2Q9UD57 310 aaPredicted RBP17.12■□□□□ 0.33
TTC28-204ENST00000468807 WI2-2373I1.2A0A1W2PRP0 233 aa17.11■□□□□ 0.33
TTC28-204ENST00000468807 RGS11O94810 467 aa17.11■□□□□ 0.33
TTC28-204ENST00000468807 SRMP19623 302 aa17.11■□□□□ 0.33
TTC28-204ENST00000468807 CHATP28329 748 aa17.11■□□□□ 0.33
TTC28-204ENST00000468807 RPS27AP62979 156 aaKnown RBP17.11■□□□□ 0.33
TTC28-204ENST00000468807 LIPKQ5VXJ0 399 aa17.11■□□□□ 0.33
TTC28-204ENST00000468807 ZNF554Q86TJ5 538 aa17.11■□□□□ 0.33
TTC28-204ENST00000468807 FAM71E2Q8N5Q1 922 aa17.11■□□□□ 0.33
TTC28-204ENST00000468807 UFD1Q92890 307 aa17.11■□□□□ 0.33
TTC28-204ENST00000468807 TMEM203Q969S6 136 aa17.11■□□□□ 0.33
TTC28-204ENST00000468807 NICN1Q9BSH3 213 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms