RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 RAB18Q9NP72 206 aa15.77■□□□□ 0.12
SMC4-209ENST00000468653 OR2S2Q9NQN1 319 aa15.77■□□□□ 0.12
SMC4-209ENST00000468653 RAI1Q7Z5J4 1906 aaPredicted RBP15.77■□□□□ 0.12
SMC4-209ENST00000468653 EPG5Q9HCE0 2579 aa15.77■□□□□ 0.12
SMC4-209ENST00000468653 C13orf42A0A1B0GVH6 325 aa15.77■□□□□ 0.11
SMC4-209ENST00000468653 CR1LQ2VPA4 569 aa15.77■□□□□ 0.11
SMC4-209ENST00000468653 Q5BKY6 102 aa15.77■□□□□ 0.11
SMC4-209ENST00000468653 GSG1LQ6UXU4 331 aa15.77■□□□□ 0.11
SMC4-209ENST00000468653 TBC1D26Q86UD7 250 aa15.77■□□□□ 0.11
SMC4-209ENST00000468653 SUCNR1Q9BXA5 334 aa15.77■□□□□ 0.11
SMC4-209ENST00000468653 METTL8Q9H825 291 aaKnown RBP15.77■□□□□ 0.11
SMC4-209ENST00000468653 TRGV10A0A0A0MS01 117 aa15.76■□□□□ 0.11
SMC4-209ENST00000468653 A0A1W2PPR1 153 aa15.76■□□□□ 0.11
SMC4-209ENST00000468653 A6NNC1 897 aa15.76■□□□□ 0.11
SMC4-209ENST00000468653 LYNX1G3V0Z9 82 aa15.76■□□□□ 0.11
SMC4-209ENST00000468653 ADAM20O43506 726 aa15.76■□□□□ 0.11
SMC4-209ENST00000468653 OR8U9P0C7N5 309 aa15.76■□□□□ 0.11
SMC4-209ENST00000468653 DANCRP0C864 163 aa15.76■□□□□ 0.11
SMC4-209ENST00000468653 LYNX1P0DP58 116 aa15.76■□□□□ 0.11
SMC4-209ENST00000468653 NDUFB7P17568 137 aa15.76■□□□□ 0.11
SMC4-209ENST00000468653 COL8A2P25067 703 aa15.76■□□□□ 0.11
SMC4-209ENST00000468653 DTX2Q86UW9 622 aa15.76■□□□□ 0.11
SMC4-209ENST00000468653 LDLRAD3Q86YD5 345 aa15.76■□□□□ 0.11
SMC4-209ENST00000468653 OR11H4Q8NGC9 324 aa15.76■□□□□ 0.11
SMC4-209ENST00000468653 OR8U1Q8NH10 309 aa15.76■□□□□ 0.11
SMC4-209ENST00000468653 SEC22AQ96IW7 307 aa15.76■□□□□ 0.11
SMC4-209ENST00000468653 PARP12Q9H0J9 701 aaKnown RBP15.76■□□□□ 0.11
SMC4-209ENST00000468653 UBTD1Q9HAC8 227 aa15.76■□□□□ 0.11
SMC4-209ENST00000468653 SLC25A10Q9UBX3 287 aaPredicted RBP15.76■□□□□ 0.11
SMC4-209ENST00000468653 KCNS2Q9ULS6 477 aa15.76■□□□□ 0.11
SMC4-209ENST00000468653 C3orf85A0A1B0GTC6 90 aa15.75■□□□□ 0.11
SMC4-209ENST00000468653 PHF1O43189 567 aaPredicted RBP15.75■□□□□ 0.11
SMC4-209ENST00000468653 ADAP1O75689 374 aa15.75■□□□□ 0.11
SMC4-209ENST00000468653 RGS11O94810 467 aa15.75■□□□□ 0.11
SMC4-209ENST00000468653 HTD2P86397 168 aa15.75■□□□□ 0.11
SMC4-209ENST00000468653 TMEM187Q14656 261 aa15.75■□□□□ 0.11
SMC4-209ENST00000468653 GNMTQ14749 295 aa15.75■□□□□ 0.11
SMC4-209ENST00000468653 LTC4SQ16873 150 aa15.75■□□□□ 0.11
SMC4-209ENST00000468653 TANC2Q9HCD6 1990 aa15.75■□□□□ 0.11
SMC4-209ENST00000468653 RAB9BQ9NP90 201 aa15.75■□□□□ 0.11
SMC4-209ENST00000468653 LAMP3Q9UQV4 416 aa15.75■□□□□ 0.11
SMC4-209ENST00000468653 IGHV3-43A0A0B4J1X8 118 aa15.75■□□□□ 0.11
SMC4-209ENST00000468653 G3V3Q6 166 aa15.75■□□□□ 0.11
SMC4-209ENST00000468653 NDUFA2O43678 99 aa15.75■□□□□ 0.11
SMC4-209ENST00000468653 HOXB5P09067 269 aa15.75■□□□□ 0.11
SMC4-209ENST00000468653 IGHV3-43DP0DP04 118 aa15.75■□□□□ 0.11
SMC4-209ENST00000468653 PPP1CCP36873 323 aaKnown RBP15.75■□□□□ 0.11
SMC4-209ENST00000468653 SRSF4Q08170 494 aaKnown RBP15.75■□□□□ 0.11
SMC4-209ENST00000468653 BVESQ8NE79 360 aa15.75■□□□□ 0.11
SMC4-209ENST00000468653 NEU4Q8WWR8 484 aaPredicted RBP15.75■□□□□ 0.11
SMC4-209ENST00000468653 TMEM246Q9BRR3 403 aa15.75■□□□□ 0.11
SMC4-209ENST00000468653 CALYQ9NYX4 217 aa15.75■□□□□ 0.11
SMC4-209ENST00000468653 TNFRSF13BO14836 293 aaPredicted RBP15.74■□□□□ 0.11
SMC4-209ENST00000468653 TNFSF12O43508 249 aa15.74■□□□□ 0.11
SMC4-209ENST00000468653 NDUFB3O43676 98 aa15.74■□□□□ 0.11
SMC4-209ENST00000468653 PGLYRP1O75594 196 aaPredicted RBP15.74■□□□□ 0.11
SMC4-209ENST00000468653 FAM53AQ6NSI3 398 aaPredicted RBP15.74■□□□□ 0.11
SMC4-209ENST00000468653 LYPD2Q6UXB3 125 aa15.74■□□□□ 0.11
SMC4-209ENST00000468653 LIAT1Q6ZQX7 453 aa15.74■□□□□ 0.11
SMC4-209ENST00000468653 FGFRL1Q8N441 504 aa15.74■□□□□ 0.11
SMC4-209ENST00000468653 GRPEL2Q8TAA5 225 aa15.74■□□□□ 0.11
SMC4-209ENST00000468653 AKR1E2Q96JD6 320 aa15.74■□□□□ 0.11
SMC4-209ENST00000468653 TP53RKQ96S44 253 aa15.74■□□□□ 0.11
SMC4-209ENST00000468653 TOLLIPQ9H0E2 274 aa15.74■□□□□ 0.11
SMC4-209ENST00000468653 UBE2J1Q9Y385 318 aaPredicted RBP15.74■□□□□ 0.11
SMC4-209ENST00000468653 LRRC10Q5BKY1 277 aa15.73■□□□□ 0.11
SMC4-209ENST00000468653 LGI3Q8N145 548 aa15.73■□□□□ 0.11
SMC4-209ENST00000468653 GLYATL2Q8WU03 294 aa15.73■□□□□ 0.11
SMC4-209ENST00000468653 GPHA2Q96T91 129 aa15.73■□□□□ 0.11
SMC4-209ENST00000468653 COMMD9Q9P000 198 aa15.73■□□□□ 0.11
SMC4-209ENST00000468653 GNG12Q9UBI6 72 aa15.73■□□□□ 0.11
SMC4-209ENST00000468653 BOLA1Q9Y3E2 137 aa15.73■□□□□ 0.11
SMC4-209ENST00000468653 hADV38S2A0JD32 116 aa15.72■□□□□ 0.11
SMC4-209ENST00000468653 IFNA21P01568 189 aa15.72■□□□□ 0.11
SMC4-209ENST00000468653 CYCSP99999 105 aaKnown RBP15.72■□□□□ 0.11
SMC4-209ENST00000468653 FGL1Q08830 312 aa15.72■□□□□ 0.11
SMC4-209ENST00000468653 KAAG1Q9UBP8 84 aa15.72■□□□□ 0.11
SMC4-209ENST00000468653 JPT1Q9UK76 154 aa15.72■□□□□ 0.11
SMC4-209ENST00000468653 RALYQ9UKM9 306 aaKnown RBP15.72■□□□□ 0.11
SMC4-209ENST00000468653 RNF150Q9ULK6 438 aa15.72■□□□□ 0.11
SMC4-209ENST00000468653 HSPB11Q9Y547 144 aa15.72■□□□□ 0.11
SMC4-209ENST00000468653 KBTBD11-OT1A0A1B0GTJ5 212 aa15.72■□□□□ 0.11
SMC4-209ENST00000468653 F2RL2O00254 374 aa15.72■□□□□ 0.11
SMC4-209ENST00000468653 RNF224P0DH78 156 aa15.72■□□□□ 0.11
SMC4-209ENST00000468653 CGB3P0DN86 165 aa15.72■□□□□ 0.11
SMC4-209ENST00000468653 CGB7P0DN87 165 aa15.72■□□□□ 0.11
SMC4-209ENST00000468653 SRPXP78539 464 aa15.72■□□□□ 0.11
SMC4-209ENST00000468653 MSI2Q96DH6 328 aaKnown RBP15.72■□□□□ 0.11
SMC4-209ENST00000468653 TMEM222Q9H0R3 208 aa15.72■□□□□ 0.11
SMC4-209ENST00000468653 OR2D2Q9H210 308 aa15.72■□□□□ 0.11
SMC4-209ENST00000468653 PLSCR3Q9NRY6 295 aa15.72■□□□□ 0.11
SMC4-209ENST00000468653 CLN8Q9UBY8 286 aa15.72■□□□□ 0.11
SMC4-209ENST00000468653 ZNF729A6NN14 1252 aaPredicted RBP15.71■□□□□ 0.11
SMC4-209ENST00000468653 RP2O75695 350 aa15.71■□□□□ 0.11
SMC4-209ENST00000468653 OMGP23515 440 aa15.71■□□□□ 0.11
SMC4-209ENST00000468653 C17orf58Q2M2W7 97 aa15.71■□□□□ 0.11
SMC4-209ENST00000468653 LAMTOR1Q6IAA8 161 aa15.71■□□□□ 0.11
SMC4-209ENST00000468653 C9orf62Q8N4C0 152 aa15.71■□□□□ 0.11
SMC4-209ENST00000468653 ZNF645Q8N7E2 425 aa15.71■□□□□ 0.11
SMC4-209ENST00000468653 LRTM2Q8N967 370 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms