RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 IGKV1D-17A0A075B6S4 117 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 F5H0A9 414 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-208ENST00000468300 HSPB6O14558 160 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 HS3ST1O14792 307 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 ARPC1BO15143 372 aaKnown RBP6.92□□□□□ -1.3
BRCA1-208ENST00000468300 AMY2AP04746 511 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 AMY2BP19961 511 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 ANXA7P20073 488 aaKnown RBP6.92□□□□□ -1.3
BRCA1-208ENST00000468300 FGF8P55075 233 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-208ENST00000468300 HERPUD1Q15011 391 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 EFNB3Q15768 340 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 SPIN3Q5JUX0 258 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 ATAD3CQ5T2N8 411 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 C17orf107Q6ZR85 190 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 ERASQ7Z444 233 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 Q8TCH9 128 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 RNASE8Q8TDE3 154 aaKnown RBP6.92□□□□□ -1.3
BRCA1-208ENST00000468300 FAM222BQ8WU58 562 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 C14orf144Q96I85 54 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 RHOVQ96L33 236 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 CMSS1Q9BQ75 279 aaKnown RBP6.92□□□□□ -1.3
BRCA1-208ENST00000468300 NDRG3Q9UGV2 375 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 NAGKQ9UJ70 344 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 ANXA10Q9UJ72 324 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 ZDHHC8Q9ULC8 765 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 CACNA1DQ01668 2161 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 TRBV6-6A0A0A6YYG2 114 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 IGKV1-6A0A0C4DH72 117 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 C17orf100A8MU93 164 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 H7C2Y5 167 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 TBPP20226 339 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 SRSF1Q07955 248 aaKnown RBP eCLIP6.92□□□□□ -1.3
BRCA1-208ENST00000468300 RBMS2Q15434 407 aaKnown RBP6.92□□□□□ -1.3
BRCA1-208ENST00000468300 SRSF7Q16629 238 aaKnown RBP eCLIP6.92□□□□□ -1.3
BRCA1-208ENST00000468300 ZNF672Q499Z4 452 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-208ENST00000468300 LRRC29Q8WV35 223 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 ST6GAL2Q96JF0 529 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 GINS4Q9BRT9 223 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 TOLLIPQ9H0E2 274 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 Q9N2K0 584 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 ZNF222Q9UK12 451 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 ARFGEF3Q5TH69 2177 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 SDCBPO00560 298 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-208ENST00000468300 FCN3O75636 299 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 HAND1O96004 215 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 CSN2P05814 226 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 HEXAP06865 529 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 CD3EP07766 207 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 SSTR2P30874 369 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 MEF2DQ14814 521 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 FAM201AQ5SY85 155 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 CLEC9AQ6UXN8 241 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 ZNF497Q6ZNH5 498 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 OR6F1Q8NGZ6 308 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 RDH5Q92781 318 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 BEX2Q9BXY8 128 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 BEX1Q9HBH7 125 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 SIRT7Q9NRC8 400 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 GSKIPQ9P0R6 139 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 PLSCR5A0PG75 271 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 DEGS1O15121 323 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 RBMXL2O75526 392 aaKnown RBP6.91□□□□□ -1.3
BRCA1-208ENST00000468300 ZNF205O95201 554 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 FAUP35544 74 aaKnown RBP6.91□□□□□ -1.3
BRCA1-208ENST00000468300 ID1P41134 155 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 LBHQ53QV2 105 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-208ENST00000468300 RNASE10Q5GAN6 216 aaKnown RBP6.91□□□□□ -1.3
BRCA1-208ENST00000468300 GPR157Q5UAW9 335 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 DHRS11Q6UWP2 260 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 GLDNQ6ZMI3 551 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-208ENST00000468300 PEG10Q86TG7 708 aaKnown RBP6.91□□□□□ -1.3
BRCA1-208ENST00000468300 LDLRAD3Q86YD5 345 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 ZNF701Q9NV72 531 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-208ENST00000468300 TREM2Q9NZC2 230 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 OPN4Q9UHM6 478 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 RNF115Q9Y4L5 304 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 OR5H14A6NHG9 310 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 SIRPB1O00241 398 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 ZNF737O75373 536 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 KNG1P01042 644 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 CD8AP01732 235 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 PSG2P11465 335 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 APOBEC3AP31941 199 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-208ENST00000468300 TNFAIP6P98066 277 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-208ENST00000468300 DMRTA1Q5VZB9 504 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 SPAG16Q8N0X2 631 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 OR11H7Q8NGC8 314 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 OR5T2Q8NGG2 359 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 OR52B4Q8NGK2 314 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 COQ2Q96H96 371 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 ELOVL1Q9BW60 279 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 PRDM13Q9H4Q3 707 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 SEBOXQ9HB31 216 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-208ENST00000468300 RASL12Q9NYN1 266 aa6.91□□□□□ -1.3
BRCA1-208ENST00000468300 DIDO1Q9BTC0 2240 aaKnown RBP6.9□□□□□ -1.3
BRCA1-208ENST00000468300 CSMD2Q7Z408 3487 aa6.9□□□□□ -1.3
BRCA1-208ENST00000468300 A0A1B0GW55 424 aa6.9□□□□□ -1.3
BRCA1-208ENST00000468300 EIF3GO75821 320 aaKnown RBP eCLIP6.9□□□□□ -1.3
BRCA1-208ENST00000468300 DUX4L2P0CJ85 424 aa6.9□□□□□ -1.3
BRCA1-208ENST00000468300 DUX4L3P0CJ86 424 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms