RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 TAF9BQ9HBM6 251 aa19.18■□□□□ 0.66
PTCH1-210ENST00000468211 CRTAPO75718 401 aaPredicted RBP19.17■□□□□ 0.66
PTCH1-210ENST00000468211 CELP19835 753 aa19.17■□□□□ 0.66
PTCH1-210ENST00000468211 RAB25P57735 213 aa19.17■□□□□ 0.66
PTCH1-210ENST00000468211 INSL4Q14641 139 aa19.17■□□□□ 0.66
PTCH1-210ENST00000468211 RNF152Q8N8N0 203 aa19.17■□□□□ 0.66
PTCH1-210ENST00000468211 OR52L2PQ8NGH6 319 aa19.17■□□□□ 0.66
PTCH1-210ENST00000468211 TFAP2CQ92754 450 aa19.17■□□□□ 0.66
PTCH1-210ENST00000468211 PSORS1C1Q9UIG5 152 aa19.17■□□□□ 0.66
PTCH1-210ENST00000468211 FAM90A10PA6NDY2 464 aa19.16■□□□□ 0.66
PTCH1-210ENST00000468211 EFCAB10A6NFE3 127 aa19.16■□□□□ 0.66
PTCH1-210ENST00000468211 FAM90A7PA6NKC0 464 aa19.16■□□□□ 0.66
PTCH1-210ENST00000468211 FAM90A23PA8MXZ1 464 aa19.16■□□□□ 0.66
PTCH1-210ENST00000468211 TXNL1O43396 289 aa19.16■□□□□ 0.66
PTCH1-210ENST00000468211 FUT3P21217 361 aa19.16■□□□□ 0.66
PTCH1-210ENST00000468211 CAPGP40121 348 aa19.16■□□□□ 0.66
PTCH1-210ENST00000468211 TAS2R43P59537 309 aa19.16■□□□□ 0.66
PTCH1-210ENST00000468211 FOXE3Q13461 319 aa19.16■□□□□ 0.66
PTCH1-210ENST00000468211 MORN2Q502X0 79 aa19.16■□□□□ 0.66
PTCH1-210ENST00000468211 CXorf66Q5JRM2 361 aaPredicted RBP19.16■□□□□ 0.66
PTCH1-210ENST00000468211 AHSA2Q719I0 299 aa19.16■□□□□ 0.66
PTCH1-210ENST00000468211 PACRGLQ8N7B6 248 aa19.16■□□□□ 0.66
PTCH1-210ENST00000468211 OR8H1Q8NGG4 311 aa19.16■□□□□ 0.66
PTCH1-210ENST00000468211 MRPL30Q8TCC3 161 aaKnown RBP19.16■□□□□ 0.66
PTCH1-210ENST00000468211 FAM46BQ96A09 425 aa19.16■□□□□ 0.66
PTCH1-210ENST00000468211 RITA1Q96K30 269 aa19.16■□□□□ 0.66
PTCH1-210ENST00000468211 MBNL3Q9NUK0 354 aaKnown RBP19.16■□□□□ 0.66
PTCH1-210ENST00000468211 LANCL1O43813 399 aa19.15■□□□□ 0.66
PTCH1-210ENST00000468211 SOX6P35712 828 aa19.15■□□□□ 0.66
PTCH1-210ENST00000468211 CDX1P47902 265 aaPredicted RBP19.15■□□□□ 0.66
PTCH1-210ENST00000468211 LUMP51884 338 aaPredicted RBP19.15■□□□□ 0.66
PTCH1-210ENST00000468211 LSAMPQ13449 338 aa19.15■□□□□ 0.66
PTCH1-210ENST00000468211 TMEM30BQ3MIR4 351 aa19.15■□□□□ 0.66
PTCH1-210ENST00000468211 ODF3L1Q8IXM7 274 aa19.15■□□□□ 0.66
PTCH1-210ENST00000468211 B9D2Q9BPU9 175 aa19.15■□□□□ 0.66
PTCH1-210ENST00000468211 GON7Q9BXV9 100 aa19.15■□□□□ 0.66
PTCH1-210ENST00000468211 OR2S2Q9NQN1 319 aa19.15■□□□□ 0.66
PTCH1-210ENST00000468211 CNOT2Q9NZN8 540 aaKnown RBP19.15■□□□□ 0.66
PTCH1-210ENST00000468211 CA11O75493 328 aa19.14■□□□□ 0.65
PTCH1-210ENST00000468211 IGHG4P01861 327 aa19.14■□□□□ 0.65
PTCH1-210ENST00000468211 CD1AP06126 327 aa19.14■□□□□ 0.65
PTCH1-210ENST00000468211 ELANEP08246 267 aa19.14■□□□□ 0.65
PTCH1-210ENST00000468211 SLC2A2P11168 524 aaPredicted RBP19.14■□□□□ 0.65
PTCH1-210ENST00000468211 PPP1CCP36873 323 aaKnown RBP19.14■□□□□ 0.65
PTCH1-210ENST00000468211 GP2P55259 537 aaKnown RBP19.14■□□□□ 0.65
PTCH1-210ENST00000468211 WNT4P56705 351 aa19.14■□□□□ 0.65
PTCH1-210ENST00000468211 CD69Q07108 199 aa19.14■□□□□ 0.65
PTCH1-210ENST00000468211 KIR2DS1Q14954 304 aa19.14■□□□□ 0.65
PTCH1-210ENST00000468211 STEAP3Q658P3 488 aa19.14■□□□□ 0.65
PTCH1-210ENST00000468211 TRAT1Q6PIZ9 186 aa19.14■□□□□ 0.65
PTCH1-210ENST00000468211 FBLIM1Q8WUP2 373 aa19.14■□□□□ 0.65
PTCH1-210ENST00000468211 RAB9BQ9NP90 201 aa19.14■□□□□ 0.65
PTCH1-210ENST00000468211 TENM3Q9P273 2699 aa19.14■□□□□ 0.65
PTCH1-210ENST00000468211 RRP9O43818 475 aaKnown RBP19.13■□□□□ 0.65
PTCH1-210ENST00000468211 PDCD6O75340 191 aa19.13■□□□□ 0.65
PTCH1-210ENST00000468211 GLAP06280 429 aa19.13■□□□□ 0.65
PTCH1-210ENST00000468211 MYF6P23409 242 aa19.13■□□□□ 0.65
PTCH1-210ENST00000468211 CNTFRP26992 372 aa19.13■□□□□ 0.65
PTCH1-210ENST00000468211 DGCR2P98153 550 aa19.13■□□□□ 0.65
PTCH1-210ENST00000468211 RCN1Q15293 331 aa19.13■□□□□ 0.65
PTCH1-210ENST00000468211 FAM27D1Q5T7N8 215 aa19.13■□□□□ 0.65
PTCH1-210ENST00000468211 OR10K2Q6IF99 312 aa19.13■□□□□ 0.65
PTCH1-210ENST00000468211 C8orf59Q8N0T1 100 aaPredicted RBP19.13■□□□□ 0.65
PTCH1-210ENST00000468211 NANOGP1Q8N7R0 232 aa19.13■□□□□ 0.65
PTCH1-210ENST00000468211 OR8U1Q8NH10 309 aa19.13■□□□□ 0.65
PTCH1-210ENST00000468211 KCTD7Q96MP8 289 aa19.13■□□□□ 0.65
PTCH1-210ENST00000468211 C8orf4Q9NR00 106 aa19.13■□□□□ 0.65
PTCH1-210ENST00000468211 PLCXD1Q9NUJ7 323 aa19.13■□□□□ 0.65
PTCH1-210ENST00000468211 MYL12BO14950 172 aa19.12■□□□□ 0.65
PTCH1-210ENST00000468211 IGF1P05019 195 aa19.12■□□□□ 0.65
PTCH1-210ENST00000468211 PSMB8P28062 276 aa19.12■□□□□ 0.65
PTCH1-210ENST00000468211 C6orf141Q5SZD1 244 aa19.12■□□□□ 0.65
PTCH1-210ENST00000468211 UNQ9370/PRO34162Q6UXP9 181 aa19.12■□□□□ 0.65
PTCH1-210ENST00000468211 NKAIN3Q8N8D7 197 aa19.12■□□□□ 0.65
PTCH1-210ENST00000468211 BPIFB6Q8NFQ5 453 aa19.12■□□□□ 0.65
PTCH1-210ENST00000468211 UQCC2Q9BRT2 126 aa19.12■□□□□ 0.65
PTCH1-210ENST00000468211 ABHD14AQ9BUJ0 271 aa19.12■□□□□ 0.65
PTCH1-210ENST00000468211 MRPL20Q9BYC9 149 aaKnown RBP19.12■□□□□ 0.65
PTCH1-210ENST00000468211 FKBP14Q9NWM8 211 aa19.12■□□□□ 0.65
PTCH1-210ENST00000468211 ZNF107Q9UII5 783 aaPredicted RBP19.12■□□□□ 0.65
PTCH1-210ENST00000468211 VDAC1P21796 283 aa19.11■□□□□ 0.65
PTCH1-210ENST00000468211 MMDQ15546 238 aa19.11■□□□□ 0.65
PTCH1-210ENST00000468211 NKAPLQ5M9Q1 402 aa19.11■□□□□ 0.65
PTCH1-210ENST00000468211 NABP2Q9BQ15 211 aa19.11■□□□□ 0.65
PTCH1-210ENST00000468211 SULT4A1Q9BR01 284 aa19.11■□□□□ 0.65
PTCH1-210ENST00000468211 KCNK15Q9H427 330 aa19.11■□□□□ 0.65
PTCH1-210ENST00000468211 KCNIP1Q9NZI2 227 aa19.11■□□□□ 0.65
PTCH1-210ENST00000468211 OR3A3P47888 321 aa19.1■□□□□ 0.65
PTCH1-210ENST00000468211 ACTBP60709 375 aa19.1■□□□□ 0.65
PTCH1-210ENST00000468211 LRRTM1Q86UE6 522 aa19.1■□□□□ 0.65
PTCH1-210ENST00000468211 C4orf3Q8WVX3 66 aa19.1■□□□□ 0.65
PTCH1-210ENST00000468211 KLK15Q9H2R5 256 aa19.1■□□□□ 0.65
PTCH1-210ENST00000468211 ZNF580Q9UK33 172 aa19.1■□□□□ 0.65
PTCH1-210ENST00000468211 JPT1Q9UK76 154 aa19.1■□□□□ 0.65
PTCH1-210ENST00000468211 WSB1Q9Y6I7 421 aa19.1■□□□□ 0.65
PTCH1-210ENST00000468211 G3V318 75 aa19.09■□□□□ 0.65
PTCH1-210ENST00000468211 VSIG8P0DPA2 414 aa19.09■□□□□ 0.65
PTCH1-210ENST00000468211 CHATP28329 748 aa19.09■□□□□ 0.65
PTCH1-210ENST00000468211 PPIFP30405 207 aaKnown RBP19.09■□□□□ 0.65
PTCH1-210ENST00000468211 HTD2P86397 168 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms