RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 DIAPH2-AS1Q14236 149 aa15.17■□□□□ 0.02
COL7A1-207ENST00000467985 INSL4Q14641 139 aa15.17■□□□□ 0.02
COL7A1-207ENST00000467985 HSD17B12Q53GQ0 312 aa15.17■□□□□ 0.02
COL7A1-207ENST00000467985 UNQ9370/PRO34162Q6UXP9 181 aa15.17■□□□□ 0.02
COL7A1-207ENST00000467985 TMEM104Q8NE00 496 aa15.17■□□□□ 0.02
COL7A1-207ENST00000467985 OR13F1Q8NGS4 319 aa15.17■□□□□ 0.02
COL7A1-207ENST00000467985 CHCHD6Q9BRQ6 235 aa15.17■□□□□ 0.02
COL7A1-207ENST00000467985 IGHV1-3A0A0C4DH29 117 aa15.16■□□□□ 0.02
COL7A1-207ENST00000467985 TRDV1A0A1B0GX56 115 aa15.16■□□□□ 0.02
COL7A1-207ENST00000467985 IGKV1D-33P01593 117 aa15.16■□□□□ 0.02
COL7A1-207ENST00000467985 IGKV1-33P01594 117 aa15.16■□□□□ 0.02
COL7A1-207ENST00000467985 MYL9P24844 172 aa15.16■□□□□ 0.02
COL7A1-207ENST00000467985 ALDH3B2P48448 385 aa15.16■□□□□ 0.02
COL7A1-207ENST00000467985 EBI3Q14213 229 aa15.16■□□□□ 0.02
COL7A1-207ENST00000467985 GLT8D1Q68CQ7 371 aa15.16■□□□□ 0.02
COL7A1-207ENST00000467985 MOB3BQ86TA1 216 aa15.16■□□□□ 0.02
COL7A1-207ENST00000467985 ZNF554Q86TJ5 538 aa15.16■□□□□ 0.02
COL7A1-207ENST00000467985 C5orf56Q8N8D9 126 aa15.16■□□□□ 0.02
COL7A1-207ENST00000467985 OR51E2Q9H255 320 aa15.16■□□□□ 0.02
COL7A1-207ENST00000467985 GNG12Q9UBI6 72 aa15.16■□□□□ 0.02
COL7A1-207ENST00000467985 A0A1W2PRX2 142 aa15.15■□□□□ 0.02
COL7A1-207ENST00000467985 SH2D7A6NKC9 451 aaPredicted RBP15.15■□□□□ 0.02
COL7A1-207ENST00000467985 TXNL1O43396 289 aa15.15■□□□□ 0.02
COL7A1-207ENST00000467985 AIREO43918 545 aa15.15■□□□□ 0.02
COL7A1-207ENST00000467985 NOL3O60936 208 aaKnown RBP15.15■□□□□ 0.02
COL7A1-207ENST00000467985 PDCD6O75340 191 aa15.15■□□□□ 0.02
COL7A1-207ENST00000467985 PF4V1P10720 104 aa15.15■□□□□ 0.02
COL7A1-207ENST00000467985 GALP22466 123 aa15.15■□□□□ 0.02
COL7A1-207ENST00000467985 CALRP27797 417 aaKnown RBP15.15■□□□□ 0.02
COL7A1-207ENST00000467985 HNF4GQ14541 408 aa15.15■□□□□ 0.02
COL7A1-207ENST00000467985 TCTEX1D4Q5JR98 221 aa15.15■□□□□ 0.02
COL7A1-207ENST00000467985 FAM27D1Q5T7N8 215 aa15.15■□□□□ 0.02
COL7A1-207ENST00000467985 STEAP3Q658P3 488 aa15.15■□□□□ 0.02
COL7A1-207ENST00000467985 C22orf42Q6IC83 251 aa15.15■□□□□ 0.02
COL7A1-207ENST00000467985 TMEM91Q6ZNR0 172 aa15.15■□□□□ 0.02
COL7A1-207ENST00000467985 REC114Q7Z4M0 266 aa15.15■□□□□ 0.02
COL7A1-207ENST00000467985 IZUMO1Q8IYV9 350 aa15.15■□□□□ 0.02
COL7A1-207ENST00000467985 OR4K15Q8NH41 348 aa15.15■□□□□ 0.02
COL7A1-207ENST00000467985 UBALD1Q8TB05 177 aa15.15■□□□□ 0.02
COL7A1-207ENST00000467985 YIPF6Q96EC8 236 aa15.15■□□□□ 0.02
COL7A1-207ENST00000467985 FUNDC2Q9BWH2 189 aa15.15■□□□□ 0.02
COL7A1-207ENST00000467985 KCNIP1Q9NZI2 227 aa15.15■□□□□ 0.02
COL7A1-207ENST00000467985 IGHV3-43A0A0B4J1X8 118 aa15.14■□□□□ 0.01
COL7A1-207ENST00000467985 HBZP02008 142 aa15.14■□□□□ 0.01
COL7A1-207ENST00000467985 UCHL1P09936 223 aa15.14■□□□□ 0.01
COL7A1-207ENST00000467985 IGHV3-43DP0DP04 118 aa15.14■□□□□ 0.01
COL7A1-207ENST00000467985 CD1BP29016 333 aa15.14■□□□□ 0.01
COL7A1-207ENST00000467985 C1orf100Q5SVJ3 147 aa15.14■□□□□ 0.01
COL7A1-207ENST00000467985 GPR107Q5VW38 600 aa15.14■□□□□ 0.01
COL7A1-207ENST00000467985 SLC25A48Q6ZT89 311 aaKnown RBP15.14■□□□□ 0.01
COL7A1-207ENST00000467985 OR2T10Q8NGZ9 312 aa15.14■□□□□ 0.01
COL7A1-207ENST00000467985 CHPT1Q8WUD6 406 aa15.14■□□□□ 0.01
COL7A1-207ENST00000467985 RTN4IP1Q8WWV3 396 aaPredicted RBP15.14■□□□□ 0.01
COL7A1-207ENST00000467985 ST6GALNAC6Q969X2 333 aa15.14■□□□□ 0.01
COL7A1-207ENST00000467985 FAM46BQ96A09 425 aa15.14■□□□□ 0.01
COL7A1-207ENST00000467985 UBE2QL1A1L167 161 aa15.13■□□□□ 0.01
COL7A1-207ENST00000467985 PSMB11A5LHX3 300 aa15.13■□□□□ 0.01
COL7A1-207ENST00000467985 RCC1P18754 421 aaPredicted RBP15.13■□□□□ 0.01
COL7A1-207ENST00000467985 SRMP19623 302 aa15.13■□□□□ 0.01
COL7A1-207ENST00000467985 REG1BP48304 166 aa15.13■□□□□ 0.01
COL7A1-207ENST00000467985 ZNF137PP52743 207 aa15.13■□□□□ 0.01
COL7A1-207ENST00000467985 SIGIRRQ6IA17 410 aa15.13■□□□□ 0.01
COL7A1-207ENST00000467985 CD200R1LQ6Q8B3 271 aa15.13■□□□□ 0.01
COL7A1-207ENST00000467985 LRRTM1Q86UE6 522 aa15.13■□□□□ 0.01
COL7A1-207ENST00000467985 PRR18Q8N4B5 295 aa15.13■□□□□ 0.01
COL7A1-207ENST00000467985 WFDC9Q8NEX5 89 aa15.13■□□□□ 0.01
COL7A1-207ENST00000467985 KCNG3Q8TAE7 436 aa15.13■□□□□ 0.01
COL7A1-207ENST00000467985 EAF1Q96JC9 268 aaPredicted RBP15.13■□□□□ 0.01
COL7A1-207ENST00000467985 NEDD4LQ96PU5 975 aa15.13■□□□□ 0.01
COL7A1-207ENST00000467985 TAF9BQ9HBM6 251 aa15.13■□□□□ 0.01
COL7A1-207ENST00000467985 MBNL3Q9NUK0 354 aaKnown RBP15.13■□□□□ 0.01
COL7A1-207ENST00000467985 TXNL4BQ9NX01 149 aaKnown RBP15.13■□□□□ 0.01
COL7A1-207ENST00000467985 CCDC160A6NGH7 325 aa15.12■□□□□ 0.01
COL7A1-207ENST00000467985 SERPINE3A8MV23 424 aa15.12■□□□□ 0.01
COL7A1-207ENST00000467985 MPIG6BO95866 241 aa15.12■□□□□ 0.01
COL7A1-207ENST00000467985 IGHG2P01859 326 aa15.12■□□□□ 0.01
COL7A1-207ENST00000467985 PF4P02776 101 aa15.12■□□□□ 0.01
COL7A1-207ENST00000467985 CD33P20138 364 aa15.12■□□□□ 0.01
COL7A1-207ENST00000467985 LSM3P62310 102 aaKnown RBP15.12■□□□□ 0.01
COL7A1-207ENST00000467985 TGIF2LXQ8IUE1 241 aa15.12■□□□□ 0.01
COL7A1-207ENST00000467985 CLVS1Q8IUQ0 354 aaPredicted RBP15.12■□□□□ 0.01
COL7A1-207ENST00000467985 FOXRED2Q8IWF2 684 aa15.12■□□□□ 0.01
COL7A1-207ENST00000467985 ZNF439Q8NDP4 499 aa15.12■□□□□ 0.01
COL7A1-207ENST00000467985 OR1L1Q8NH94 360 aa15.12■□□□□ 0.01
COL7A1-207ENST00000467985 KCTD7Q96MP8 289 aa15.12■□□□□ 0.01
COL7A1-207ENST00000467985 TMEM59Q9BXS4 323 aa15.12■□□□□ 0.01
COL7A1-207ENST00000467985 NCBP2LA6PVI3 153 aaKnown RBP15.11■□□□□ 0.01
COL7A1-207ENST00000467985 PDCD5O14737 125 aa15.11■□□□□ 0.01
COL7A1-207ENST00000467985 MOSP00540 346 aa15.11■□□□□ 0.01
COL7A1-207ENST00000467985 VSIG8P0DPA2 414 aa15.11■□□□□ 0.01
COL7A1-207ENST00000467985 FGF9P31371 208 aaPredicted RBP15.11■□□□□ 0.01
COL7A1-207ENST00000467985 RPS27AP62979 156 aaKnown RBP15.11■□□□□ 0.01
COL7A1-207ENST00000467985 SLC35B1P78383 322 aa15.11■□□□□ 0.01
COL7A1-207ENST00000467985 HTD2P86397 168 aa15.11■□□□□ 0.01
COL7A1-207ENST00000467985 OXLD1Q5BKU9 147 aa15.11■□□□□ 0.01
COL7A1-207ENST00000467985 CT45A1Q5HYN5 189 aa15.11■□□□□ 0.01
COL7A1-207ENST00000467985 KHDC1LQ5JSQ8 128 aa15.11■□□□□ 0.01
COL7A1-207ENST00000467985 SLC35E3Q7Z769 313 aa15.11■□□□□ 0.01
COL7A1-207ENST00000467985 COMMD1Q8N668 190 aa15.11■□□□□ 0.01
COL7A1-207ENST00000467985 Q8N6K4 173 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms