RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 MCRIP1C9JLW8 97 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 ZNF878C9JN71 531 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 F5H768 121 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 SLC17A2O00624 439 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 CHEK1O14757 476 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 LYRM1O43325 122 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 TIMM8AO60220 97 aaPredicted RBP2.61□□□□□ -1.99
VPS13D-203ENST00000466732 SCGNO76038 276 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 IFNA1P01562 189 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 ORM1P02763 201 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 OPN1SWP03999 348 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 CD74P04233 296 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 ISG15P05161 165 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 OR5G3P0C626 314 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 FABP4P15090 132 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 CELP19835 753 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 NFYAP23511 347 aaPredicted RBP2.61□□□□□ -1.99
VPS13D-203ENST00000466732 NFYBP25208 207 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 PSMA1P25786 263 aaKnown RBP2.61□□□□□ -1.99
VPS13D-203ENST00000466732 PSMB9P28065 219 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 IMPA1P29218 277 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 GABRA2P47869 451 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 OR3A4PP47883 348 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 CAV2P51636 162 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 ACLYP53396 1101 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 S100A10P60903 97 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 SELENOWP63302 87 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 RUNX1Q01196 453 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 FABP5Q01469 135 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 ST3GAL4Q11206 333 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 ZNF154Q13106 437 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 GNMTQ14749 295 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 ZIC1Q15915 447 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 GABRA6Q16445 453 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 MRPL23Q16540 153 aaKnown RBP2.61□□□□□ -1.99
VPS13D-203ENST00000466732 PRSS8Q16651 343 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 ASPHD2Q6ICH7 369 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 RPL22L1Q6P5R6 122 aaKnown RBP2.61□□□□□ -1.99
VPS13D-203ENST00000466732 KCNIP4Q6PIL6 250 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 CD200R1LQ6Q8B3 271 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 ALKAL1Q6UXT8 129 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 B3GLCTQ6Y288 498 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 IL34Q6ZMJ4 242 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 TMEM25Q86YD3 366 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 ARIH2OSQ8N7S6 290 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 SLC35G3Q8N808 338 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 LRRC75AQ8NAA5 344 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 ZNF555Q8NEP9 628 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 LFNGQ8NES3 379 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 TSTD1Q8NFU3 115 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 OR4F6Q8NGB9 312 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 OR4K5Q8NGD3 323 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 OR52L1Q8NGH7 329 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 OR4D11Q8NGI4 311 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 OR5A2Q8NGI9 324 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 OR51G2Q8NGK0 314 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 OR1N2Q8NGR9 330 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 RFESDQ8TAC1 157 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 FAM110BQ8TC76 370 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 GPR119Q8TDV5 335 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 EEF1AKMT1Q8WVE0 214 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 CANT1Q8WVQ1 401 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 SPRYD4Q8WW59 207 aaPredicted RBP2.61□□□□□ -1.99
VPS13D-203ENST00000466732 UPRTQ96BW1 309 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 OR10C1Q96KK4 312 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 GPR82Q96P67 336 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 CLCC1Q96S66 551 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 COPS8Q99627 209 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 MRPL57Q9BQC6 102 aaKnown RBP2.61□□□□□ -1.99
VPS13D-203ENST00000466732 ZNF649Q9BS31 505 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 PSMG3Q9BT73 122 aaPredicted RBP2.61□□□□□ -1.99
VPS13D-203ENST00000466732 ADAT1Q9BUB4 502 aaKnown RBP2.61□□□□□ -1.99
VPS13D-203ENST00000466732 NMNAT2Q9BZQ4 307 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 SELENOIQ9C0D9 397 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 SLC25A31Q9H0C2 315 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 SLC25A51Q9H1U9 297 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 SYT4Q9H2B2 425 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 PATZ1Q9HBE1 687 aaKnown RBP2.61□□□□□ -1.99
VPS13D-203ENST00000466732 GPATCH2LQ9NWQ4 482 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 OR5AC2Q9NZP5 309 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 HSPB8Q9UJY1 196 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 OR10H1Q9Y4A9 318 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 RFNGQ9Y644 331 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 IGSF9BQ9UPX0 1349 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 LAMB2P55268 1798 aa2.61□□□□□ -1.99
VPS13D-203ENST00000466732 XIRP1Q702N8 1843 aaKnown RBP2.61□□□□□ -1.99
VPS13D-203ENST00000466732 SBF1O95248 1867 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 USP6P35125 1406 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 ADAMTS13Q76LX8 1427 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 HELZP42694 1942 aaKnown RBP2.6□□□□□ -1.99
VPS13D-203ENST00000466732 MON2Q7Z3U7 1717 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 SHANK3Q9BYB0 1731 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 IGLV8-61A0A075B6I0 122 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 A0A0U1RRA0 63 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 A0A1B0GUS0 222 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 OR5B21A6NL26 309 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 IFITM5A6NNB3 132 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 DHRS7CA6NNS2 312 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 ZNF705GA8MUZ8 300 aaPredicted RBP2.6□□□□□ -1.99
VPS13D-203ENST00000466732 G3V3Q6 166 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms