RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 CCNOP22674 350 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 PAX9P55771 341 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 ARG2P78540 354 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 HTD2P86397 168 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 ZNF154Q13106 437 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 TESK1Q15569 626 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 TMEM249Q2WGJ8 235 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 SMIM21Q3B7S5 101 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 TMEM88Q6PEY1 159 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 SPSB3Q6PJ21 355 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 TMEM182Q6ZP80 229 aaPredicted RBP5.8□□□□□ -1.48
CDHR3-204ENST00000466351 SSX8Q7RTT4 187 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 IQCF2Q8IXL9 164 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 HSD17B11Q8NBQ5 300 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 SCCPDHQ8NBX0 429 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 OR13D1Q8NGV5 346 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 FAM213BQ8TBF2 198 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 RXFP4Q8TDU9 374 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 TCEAL3Q969E4 200 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 HIST1H2BAQ96A08 127 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 GALMQ96C23 342 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 CYYR1Q96J86 154 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 LURAP1Q96LR2 239 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 HES7Q9BYE0 225 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 SMIM3Q9BZL3 60 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 EIF5A2Q9GZV4 153 aaKnown RBP5.8□□□□□ -1.48
CDHR3-204ENST00000466351 CXXC4Q9H2H0 198 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 CCL28Q9NRJ3 127 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 HSPB7Q9UBY9 170 aa5.8□□□□□ -1.48
CDHR3-204ENST00000466351 INTS1Q8N201 2190 aaKnown RBP5.8□□□□□ -1.48
CDHR3-204ENST00000466351 CUL9Q8IWT3 2517 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 FAM24AA6NFZ4 105 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 PRR33A8MZF0 331 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 CHST1O43916 411 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 CEACAM4O75871 244 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 WISP2O76076 250 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 NXPH2O95156 264 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 TMEM50AO95807 157 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 HAND1O96004 215 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 CRYBA1P05813 215 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 IGHV1-2P23083 117 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 CA6P23280 308 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 NOVA1P51513 510 aaKnown RBP5.79□□□□□ -1.48
CDHR3-204ENST00000466351 DYNLT3P51808 116 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 FOXG1P55316 489 aaPredicted RBP5.79□□□□□ -1.48
CDHR3-204ENST00000466351 EIF4EBP1Q13541 118 aaPredicted RBP5.79□□□□□ -1.48
CDHR3-204ENST00000466351 SSX2Q16385 188 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 CR1LQ2VPA4 569 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 LRRC75BQ2VPJ9 315 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 PDLIM3Q53GG5 364 aaPredicted RBP5.79□□□□□ -1.48
CDHR3-204ENST00000466351 CXorf66Q5JRM2 361 aaPredicted RBP5.79□□□□□ -1.48
CDHR3-204ENST00000466351 OR2T2Q6IF00 324 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 BRICD5Q6PL45 260 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 TMEM14EPQ6UXP3 125 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 LINC00696Q6ZRV3 163 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 P4HA3Q7Z4N8 544 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.79□□□□□ -1.48
CDHR3-204ENST00000466351 ODF3L1Q8IXM7 274 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 ZNF525Q8N782 197 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 BOLLQ8N9W6 283 aaKnown RBP5.79□□□□□ -1.48
CDHR3-204ENST00000466351 PPP1R35Q8TAP8 253 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 SFT2D1Q8WV19 159 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 EDARADDQ8WWZ3 215 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 RDH5Q92781 318 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 GPR146Q96CH1 333 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 HSD17B10Q99714 261 aaKnown RBP5.79□□□□□ -1.48
CDHR3-204ENST00000466351 NIPSNAP3BQ9BS92 247 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 AGMATQ9BSE5 352 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 TMUB1Q9BVT8 246 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 SH3BGRL3Q9H299 93 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 TMEM231Q9H6L2 316 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 PLSCR4Q9NRQ2 329 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 CISD1Q9NZ45 108 aaKnown RBP5.79□□□□□ -1.48
CDHR3-204ENST00000466351 SPRR3Q9UBC9 169 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 IL17BQ9UHF5 180 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 PRSS50Q9UI38 385 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 ERRFI1Q9UJM3 462 aaPredicted RBP5.79□□□□□ -1.48
CDHR3-204ENST00000466351 TRAPPC2LQ9UL33 140 aa5.79□□□□□ -1.48
CDHR3-204ENST00000466351 KIAA2026Q5HYC2 2103 aa5.78□□□□□ -1.48
CDHR3-204ENST00000466351 LOC102723971A0A1B0GUV8 181 aa5.78□□□□□ -1.48
CDHR3-204ENST00000466351 C5orf52A6NGY3 159 aa5.78□□□□□ -1.48
CDHR3-204ENST00000466351 ZNF98A6NK75 572 aa5.78□□□□□ -1.48
CDHR3-204ENST00000466351 C9JQL5 133 aa5.78□□□□□ -1.48
CDHR3-204ENST00000466351 TMEM250H0YL14 139 aa5.78□□□□□ -1.48
CDHR3-204ENST00000466351 HSD17B6O14756 317 aa5.78□□□□□ -1.48
CDHR3-204ENST00000466351 RAB29O14966 203 aa5.78□□□□□ -1.48
CDHR3-204ENST00000466351 MPDU1O75352 247 aa5.78□□□□□ -1.48
CDHR3-204ENST00000466351 CLDN14O95500 239 aa5.78□□□□□ -1.48
CDHR3-204ENST00000466351 IGLV2-14P01704 120 aa5.78□□□□□ -1.48
CDHR3-204ENST00000466351 SRP19P09132 144 aaKnown RBP5.78□□□□□ -1.48
CDHR3-204ENST00000466351 BCL2P10415 239 aa5.78□□□□□ -1.48
CDHR3-204ENST00000466351 PSG2P11465 335 aa5.78□□□□□ -1.48
CDHR3-204ENST00000466351 RAB5AP20339 215 aa5.78□□□□□ -1.48
CDHR3-204ENST00000466351 PPP1CCP36873 323 aaKnown RBP5.78□□□□□ -1.48
CDHR3-204ENST00000466351 KIR2DS2P43631 304 aa5.78□□□□□ -1.48
CDHR3-204ENST00000466351 HCFC1P51610 2035 aa5.78□□□□□ -1.48
CDHR3-204ENST00000466351 TNFRSF9Q07011 255 aa5.78□□□□□ -1.48
CDHR3-204ENST00000466351 RSPO4Q2I0M5 234 aaPredicted RBP5.78□□□□□ -1.48
CDHR3-204ENST00000466351 VWC2Q2TAL6 325 aa5.78□□□□□ -1.48
CDHR3-204ENST00000466351 ZNF718Q3SXZ3 478 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms