RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 ARL6IP1Q15041 203 aa16.39■□□□□ 0.21
SKA3-205ENST00000465471 TPTE2P1Q5T6R2 138 aa16.39■□□□□ 0.21
SKA3-205ENST00000465471 PRR18Q8N4B5 295 aa16.39■□□□□ 0.21
SKA3-205ENST00000465471 JPT1Q9UK76 154 aa16.39■□□□□ 0.21
SKA3-205ENST00000465471 MGAT4AQ9UM21 535 aa16.39■□□□□ 0.21
SKA3-205ENST00000465471 AMMECR1Q9Y4X0 333 aaPredicted RBP16.39■□□□□ 0.21
SKA3-205ENST00000465471 HILPDAQ9Y5L2 63 aa16.39■□□□□ 0.21
SKA3-205ENST00000465471 FAM181BA6NEQ2 426 aa16.38■□□□□ 0.21
SKA3-205ENST00000465471 OOSP1A8MZH6 123 aa16.38■□□□□ 0.21
SKA3-205ENST00000465471 HKR1P10072 659 aa16.38■□□□□ 0.21
SKA3-205ENST00000465471 CEACAM3P40198 252 aa16.38■□□□□ 0.21
SKA3-205ENST00000465471 HLA-DRB3P79483 266 aa16.38■□□□□ 0.21
SKA3-205ENST00000465471 LY6G6FQ5SQ64 297 aa16.38■□□□□ 0.21
SKA3-205ENST00000465471 SLC25A48Q6ZT89 311 aaKnown RBP16.38■□□□□ 0.21
SKA3-205ENST00000465471 KCTD12Q96CX2 325 aaKnown RBP16.38■□□□□ 0.21
SKA3-205ENST00000465471 GNG12Q9UBI6 72 aa16.38■□□□□ 0.21
SKA3-205ENST00000465471 ANK2Q01484 3957 aa16.37■□□□□ 0.21
SKA3-205ENST00000465471 FCGR3AP08637 254 aa16.37■□□□□ 0.21
SKA3-205ENST00000465471 CD3GP09693 182 aa16.37■□□□□ 0.21
SKA3-205ENST00000465471 COMPP49747 757 aaPredicted RBP16.37■□□□□ 0.21
SKA3-205ENST00000465471 ACTG1P63261 375 aa16.37■□□□□ 0.21
SKA3-205ENST00000465471 GNMTQ14749 295 aa16.37■□□□□ 0.21
SKA3-205ENST00000465471 OR52L2PQ8NGH6 319 aa16.37■□□□□ 0.21
SKA3-205ENST00000465471 GALMQ96C23 342 aa16.37■□□□□ 0.21
SKA3-205ENST00000465471 OCSTAMPQ9BR26 566 aa16.37■□□□□ 0.21
SKA3-205ENST00000465471 ABCG5Q9H222 651 aa16.37■□□□□ 0.21
SKA3-205ENST00000465471 OR2S2Q9NQN1 319 aa16.37■□□□□ 0.21
SKA3-205ENST00000465471 STAB1Q9NY15 2570 aa16.37■□□□□ 0.21
SKA3-205ENST00000465471 A0A075B6Q4 140 aa16.36■□□□□ 0.21
SKA3-205ENST00000465471 A0A0A6YYH2 397 aa16.36■□□□□ 0.21
SKA3-205ENST00000465471 A0A1W2PPE3 182 aa16.36■□□□□ 0.21
SKA3-205ENST00000465471 A6NJ64 397 aa16.36■□□□□ 0.21
SKA3-205ENST00000465471 SLC31A2O15432 143 aa16.36■□□□□ 0.21
SKA3-205ENST00000465471 GSTP1P09211 210 aaKnown RBP16.36■□□□□ 0.21
SKA3-205ENST00000465471 ZNF134P52741 427 aa16.36■□□□□ 0.21
SKA3-205ENST00000465471 MADCAM1Q13477 382 aa16.36■□□□□ 0.21
SKA3-205ENST00000465471 ZNF260Q3ZCT1 412 aa16.36■□□□□ 0.21
SKA3-205ENST00000465471 CDNFQ49AH0 187 aa16.36■□□□□ 0.21
SKA3-205ENST00000465471 MORN2Q502X0 79 aa16.36■□□□□ 0.21
SKA3-205ENST00000465471 PLA1AQ53H76 456 aa16.36■□□□□ 0.21
SKA3-205ENST00000465471 STEAP3Q658P3 488 aa16.36■□□□□ 0.21
SKA3-205ENST00000465471 OR10V1Q8NGI7 309 aa16.36■□□□□ 0.21
SKA3-205ENST00000465471 SPATA3Q8NHX4 192 aa16.36■□□□□ 0.21
SKA3-205ENST00000465471 SETD6Q8TBK2 473 aa16.36■□□□□ 0.21
SKA3-205ENST00000465471 ELF5Q9UKW6 265 aaPredicted RBP16.36■□□□□ 0.21
SKA3-205ENST00000465471 TCF19Q9Y242 345 aa16.36■□□□□ 0.21
SKA3-205ENST00000465471 TENM1Q9UKZ4 2725 aa16.36■□□□□ 0.21
SKA3-205ENST00000465471 YPEL1O60688 119 aa16.35■□□□□ 0.21
SKA3-205ENST00000465471 RAB13P51153 203 aa16.35■□□□□ 0.21
SKA3-205ENST00000465471 ZNF137PP52743 207 aa16.35■□□□□ 0.21
SKA3-205ENST00000465471 RELBQ01201 579 aa16.35■□□□□ 0.21
SKA3-205ENST00000465471 SRSF7Q16629 238 aaKnown RBP eCLIP16.35■□□□□ 0.21
SKA3-205ENST00000465471 CT45A1Q5HYN5 189 aa16.35■□□□□ 0.21
SKA3-205ENST00000465471 HACD4Q5VWC8 232 aa16.35■□□□□ 0.21
SKA3-205ENST00000465471 LIAT1Q6ZQX7 453 aa16.35■□□□□ 0.21
SKA3-205ENST00000465471 Q6ZS49 121 aa16.35■□□□□ 0.21
SKA3-205ENST00000465471 OR10X1Q8NGY0 326 aa16.35■□□□□ 0.21
SKA3-205ENST00000465471 CT45A3Q8NHU0 189 aa16.35■□□□□ 0.21
SKA3-205ENST00000465471 ST6GALNAC6Q969X2 333 aa16.35■□□□□ 0.21
SKA3-205ENST00000465471 YPEL2Q96QA6 119 aa16.35■□□□□ 0.21
SKA3-205ENST00000465471 BCL7BQ9BQE9 202 aa16.35■□□□□ 0.21
SKA3-205ENST00000465471 DCSTAMPQ9H295 470 aa16.35■□□□□ 0.21
SKA3-205ENST00000465471 C1RLQ9NZP8 487 aa16.35■□□□□ 0.21
SKA3-205ENST00000465471 A0A1W2PPI3 338 aa16.34■□□□□ 0.21
SKA3-205ENST00000465471 A6NDX4 124 aa16.34■□□□□ 0.21
SKA3-205ENST00000465471 NDUFA7O95182 113 aa16.34■□□□□ 0.21
SKA3-205ENST00000465471 SCTP09683 121 aa16.34■□□□□ 0.21
SKA3-205ENST00000465471 PPP1CCP36873 323 aaKnown RBP16.34■□□□□ 0.21
SKA3-205ENST00000465471 TMBIM6P55061 237 aa16.34■□□□□ 0.21
SKA3-205ENST00000465471 MRPS15P82914 257 aaKnown RBP16.34■□□□□ 0.21
SKA3-205ENST00000465471 ZNF816Q0VGE8 651 aaPredicted RBP16.34■□□□□ 0.21
SKA3-205ENST00000465471 DIAPH2-AS1Q14236 149 aa16.34■□□□□ 0.21
SKA3-205ENST00000465471 UBE2NLQ5JXB2 153 aa16.34■□□□□ 0.21
SKA3-205ENST00000465471 CCDC144NLQ6NUI1 221 aa16.34■□□□□ 0.21
SKA3-205ENST00000465471 CCBE1Q6UXH8 406 aaPredicted RBP16.34■□□□□ 0.21
SKA3-205ENST00000465471 CLVS1Q8IUQ0 354 aaPredicted RBP16.34■□□□□ 0.21
SKA3-205ENST00000465471 RAB2BQ8WUD1 216 aa16.34■□□□□ 0.21
SKA3-205ENST00000465471 TAF15Q92804 592 aaKnown RBP eCLIP16.34■□□□□ 0.21
SKA3-205ENST00000465471 TOMM40LQ969M1 308 aa16.34■□□□□ 0.21
SKA3-205ENST00000465471 RPEQ96AT9 228 aa16.34■□□□□ 0.21
SKA3-205ENST00000465471 ABCB10Q9NRK6 738 aa16.34■□□□□ 0.21
SKA3-205ENST00000465471 SCOCQ9UIL1 159 aa16.34■□□□□ 0.21
SKA3-205ENST00000465471 IGKV1-6A0A0C4DH72 117 aa16.33■□□□□ 0.2
SKA3-205ENST00000465471 TMEM235A6NFC5 223 aa16.33■□□□□ 0.2
SKA3-205ENST00000465471 TRDCB7Z8K6 153 aa16.33■□□□□ 0.2
SKA3-205ENST00000465471 RGS11O94810 467 aa16.33■□□□□ 0.2
SKA3-205ENST00000465471 DTYMKP23919 212 aa16.33■□□□□ 0.2
SKA3-205ENST00000465471 RAB7AP51149 207 aa16.33■□□□□ 0.2
SKA3-205ENST00000465471 RORCP51449 518 aa16.33■□□□□ 0.2
SKA3-205ENST00000465471 ARFRP1Q13795 201 aa16.33■□□□□ 0.2
SKA3-205ENST00000465471 HERPUD1Q15011 391 aa16.33■□□□□ 0.2
SKA3-205ENST00000465471 LY6EQ16553 131 aa16.33■□□□□ 0.2
SKA3-205ENST00000465471 PNLIPRP3Q17RR3 467 aa16.33■□□□□ 0.2
SKA3-205ENST00000465471 IL1F10Q8WWZ1 152 aa16.33■□□□□ 0.2
SKA3-205ENST00000465471 CFHR4Q92496 578 aa16.33■□□□□ 0.2
SKA3-205ENST00000465471 GCDHQ92947 438 aaPredicted RBP16.33■□□□□ 0.2
SKA3-205ENST00000465471 FAM90A9PA6NNJ1 464 aa16.32■□□□□ 0.2
SKA3-205ENST00000465471 HSD17B6O14756 317 aa16.32■□□□□ 0.2
SKA3-205ENST00000465471 CHST1O43916 411 aa16.32■□□□□ 0.2
SKA3-205ENST00000465471 SSX5O60225 188 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 180.3 ms