RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 CTF1Q16619 201 aa9.39□□□□□ -0.91
CUX1-207ENST00000465461 CT45A1Q5HYN5 189 aa9.39□□□□□ -0.91
CUX1-207ENST00000465461 TRAT1Q6PIZ9 186 aa9.39□□□□□ -0.91
CUX1-207ENST00000465461 GPR141Q7Z602 305 aa9.39□□□□□ -0.91
CUX1-207ENST00000465461 ANKRD13BQ86YJ7 626 aa9.39□□□□□ -0.91
CUX1-207ENST00000465461 OR52M1Q8NGK5 317 aa9.39□□□□□ -0.91
CUX1-207ENST00000465461 CT45A3Q8NHU0 189 aa9.39□□□□□ -0.91
CUX1-207ENST00000465461 PTX4Q96A99 478 aa9.39□□□□□ -0.91
CUX1-207ENST00000465461 SLC25A38Q96DW6 304 aa9.39□□□□□ -0.91
CUX1-207ENST00000465461 Q9N2K0 584 aa9.39□□□□□ -0.91
CUX1-207ENST00000465461 ABCB10Q9NRK6 738 aa9.39□□□□□ -0.91
CUX1-207ENST00000465461 TRBV6-6A0A0A6YYG2 114 aa9.38□□□□□ -0.91
CUX1-207ENST00000465461 CD3GP09693 182 aa9.38□□□□□ -0.91
CUX1-207ENST00000465461 MDKP21741 143 aaPredicted RBP9.38□□□□□ -0.91
CUX1-207ENST00000465461 ARFRP1Q13795 201 aa9.38□□□□□ -0.91
CUX1-207ENST00000465461 CDNFQ49AH0 187 aa9.38□□□□□ -0.91
CUX1-207ENST00000465461 MORN2Q502X0 79 aa9.38□□□□□ -0.91
CUX1-207ENST00000465461 AWAT1Q58HT5 328 aa9.38□□□□□ -0.91
CUX1-207ENST00000465461 ZNF439Q8NDP4 499 aa9.38□□□□□ -0.91
CUX1-207ENST00000465461 OR10X1Q8NGY0 326 aa9.38□□□□□ -0.91
CUX1-207ENST00000465461 OR5R1Q8NH85 324 aa9.38□□□□□ -0.91
CUX1-207ENST00000465461 TOMM40LQ969M1 308 aa9.38□□□□□ -0.91
CUX1-207ENST00000465461 RPEQ96AT9 228 aa9.38□□□□□ -0.91
CUX1-207ENST00000465461 GALMQ96C23 342 aa9.38□□□□□ -0.91
CUX1-207ENST00000465461 PARP12Q9H0J9 701 aaKnown RBP9.38□□□□□ -0.91
CUX1-207ENST00000465461 C12orf4Q9NQ89 552 aa9.38□□□□□ -0.91
CUX1-207ENST00000465461 RHBDL2Q9NX52 303 aa9.38□□□□□ -0.91
CUX1-207ENST00000465461 OR1A1Q9P1Q5 309 aa9.38□□□□□ -0.91
CUX1-207ENST00000465461 IGKV1-6A0A0C4DH72 117 aa9.37□□□□□ -0.91
CUX1-207ENST00000465461 A6NDX4 124 aa9.37□□□□□ -0.91
CUX1-207ENST00000465461 VGLL3A8MV65 326 aa9.37□□□□□ -0.91
CUX1-207ENST00000465461 GABARAPO95166 117 aa9.37□□□□□ -0.91
CUX1-207ENST00000465461 FCGR3AP08637 254 aa9.37□□□□□ -0.91
CUX1-207ENST00000465461 PTHLHP12272 177 aa9.37□□□□□ -0.91
CUX1-207ENST00000465461 RAG2P55895 527 aa9.37□□□□□ -0.91
CUX1-207ENST00000465461 HLA-DRB3P79483 266 aa9.37□□□□□ -0.91
CUX1-207ENST00000465461 ZNF260Q3ZCT1 412 aa9.37□□□□□ -0.91
CUX1-207ENST00000465461 DHRS7BQ6IAN0 325 aaPredicted RBP9.37□□□□□ -0.91
CUX1-207ENST00000465461 C12orf54Q6X4T0 127 aa9.37□□□□□ -0.91
CUX1-207ENST00000465461 Q6ZSV7 163 aa9.37□□□□□ -0.91
CUX1-207ENST00000465461 CLVS1Q8IUQ0 354 aaPredicted RBP9.37□□□□□ -0.91
CUX1-207ENST00000465461 SLC25A46Q96AG3 418 aa9.37□□□□□ -0.91
CUX1-207ENST00000465461 RIMS4Q9H426 269 aaPredicted RBP9.37□□□□□ -0.91
CUX1-207ENST00000465461 ABRACLQ9P1F3 81 aa9.37□□□□□ -0.91
CUX1-207ENST00000465461 SPATA2Q9UM82 520 aa9.37□□□□□ -0.91
CUX1-207ENST00000465461 TCF19Q9Y242 345 aa9.37□□□□□ -0.91
CUX1-207ENST00000465461 SIGLEC9Q9Y336 463 aa9.37□□□□□ -0.91
CUX1-207ENST00000465461 AMMECR1Q9Y4X0 333 aaPredicted RBP9.37□□□□□ -0.91
CUX1-207ENST00000465461 TRAV18A0A075B6X5 111 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 IGKV1D-8A0A087WSZ0 117 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 IGHV3-72A0A0B4J1Y9 119 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 A0A1W2PPI3 338 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 TMEM235A6NFC5 223 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 TRDCB7Z8K6 153 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 HSD17B6O14756 317 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 ST8SIA5O15466 376 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 FCER2P06734 321 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 GSTT2P0CG29 244 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 GSTT2BP0CG30 244 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 CEACAM3P40198 252 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 CEACAM6P40199 344 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 MRPS15P82914 257 aaKnown RBP9.36□□□□□ -0.91
CUX1-207ENST00000465461 HTD2P86397 168 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 MADCAM1Q13477 382 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 SPCS2Q15005 226 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 AANATQ16613 207 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 SLC25A48Q6ZT89 311 aaKnown RBP9.36□□□□□ -0.91
CUX1-207ENST00000465461 LYG1Q8N1E2 194 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 DRAM1Q8N682 238 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 OR56B4Q8NH76 319 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 SPATA3Q8NHX4 192 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 NUDCD2Q8WVJ2 157 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 CAPSLQ8WWF8 208 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 OCSTAMPQ9BR26 566 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 ST6GALNAC5Q9BVH7 336 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 DCSTAMPQ9H295 470 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 RAB9BQ9NP90 201 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 COMMD3Q9UBI1 195 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 SLC23A1Q9UHI7 598 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 JPT1Q9UK76 154 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 ETV7Q9Y603 341 aa9.36□□□□□ -0.91
CUX1-207ENST00000465461 SH2D7A6NKC9 451 aaPredicted RBP9.35□□□□□ -0.91
CUX1-207ENST00000465461 SERPINE3A8MV23 424 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 COL6A5A8TX70 2615 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 ZNF736B4DX44 427 aaPredicted RBP9.35□□□□□ -0.91
CUX1-207ENST00000465461 TIMM23O14925 209 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 SSX5O60225 188 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 YPEL1O60688 119 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 SNRNP70P08621 437 aaKnown RBP9.35□□□□□ -0.91
CUX1-207ENST00000465461 TALDO1P37837 337 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 MNDAP41218 407 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 OR3A3P47888 321 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 DYNLT3P51808 116 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 SRSF4Q08170 494 aaKnown RBP9.35□□□□□ -0.91
CUX1-207ENST00000465461 FOXL1Q12952 345 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 HNF4GQ14541 408 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 HERPUD1Q15011 391 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 IGSF11Q5DX21 431 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 HACD4Q5VWC8 232 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 Q6ZS46 218 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms