RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 CCL1P22362 96 aa11.37□□□□□ -0.59
HDAC6-214ENST00000465269 DCKP27707 260 aa11.37□□□□□ -0.59
HDAC6-214ENST00000465269 CD1BP29016 333 aa11.37□□□□□ -0.59
HDAC6-214ENST00000465269 ETV1P50549 477 aa11.37□□□□□ -0.59
HDAC6-214ENST00000465269 MTCP1P56278 107 aa11.37□□□□□ -0.59
HDAC6-214ENST00000465269 NDPQ00604 133 aa11.37□□□□□ -0.59
HDAC6-214ENST00000465269 STX19Q8N4C7 294 aa11.37□□□□□ -0.59
HDAC6-214ENST00000465269 RNF166Q96A37 237 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-214ENST00000465269 ALG8Q9BVK2 526 aa11.37□□□□□ -0.59
HDAC6-214ENST00000465269 ELOVL1Q9BW60 279 aa11.37□□□□□ -0.59
HDAC6-214ENST00000465269 CHST5Q9GZS9 411 aa11.37□□□□□ -0.59
HDAC6-214ENST00000465269 COMMD4Q9H0A8 199 aa11.37□□□□□ -0.59
HDAC6-214ENST00000465269 ERVK13-1Q9NX77 482 aa11.37□□□□□ -0.59
HDAC6-214ENST00000465269 CLEC2DQ9UHP7 191 aa11.37□□□□□ -0.59
HDAC6-214ENST00000465269 ZNF580Q9UK33 172 aa11.37□□□□□ -0.59
HDAC6-214ENST00000465269 TPRKBQ9Y3C4 175 aa11.37□□□□□ -0.59
HDAC6-214ENST00000465269 A3GALT2U3KPV4 340 aa11.37□□□□□ -0.59
HDAC6-214ENST00000465269 IGHV7-81A0A0B4J1V7 117 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 IGHV3-43A0A0B4J1X8 118 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 A0A1W2PN81 502 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 METTL15A6NJ78 407 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 DHRS7CA6NNS2 312 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 NPIPB11E5RHQ5 1161 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 DEGS1O15121 323 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 SYT7O43581 403 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 RGS11O94810 467 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 CYB5AP00167 134 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 HSPB1P04792 205 aaKnown RBP11.36□□□□□ -0.59
HDAC6-214ENST00000465269 IGHV3-43DP0DP04 118 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 CRHBPP24387 322 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 C21orf33P30042 268 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-214ENST00000465269 CHRNA7P36544 502 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 RBP2P50120 134 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 ATP1B3P54709 279 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 PDZK1IP1Q13113 114 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 GALEQ14376 348 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 CDK5R1Q15078 307 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 GTSCR1Q86UQ5 136 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 DEFB125Q8N687 156 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 MINDY2Q8NBR6 621 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 OR51T1Q8NGJ9 327 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 PLPPR1Q8TBJ4 325 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 MS4A10Q96PG2 267 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 ISG20L2Q9H9L3 353 aaKnown RBP11.36□□□□□ -0.59
HDAC6-214ENST00000465269 FKBP14Q9NWM8 211 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 PAK1IP1Q9NWT1 392 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-214ENST00000465269 CNOT2Q9NZN8 540 aaKnown RBP11.36□□□□□ -0.59
HDAC6-214ENST00000465269 GNG8Q9UK08 70 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 ADAM30Q9UKF2 790 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 DIMT1Q9UNQ2 313 aaKnown RBP11.36□□□□□ -0.59
HDAC6-214ENST00000465269 MRPS28Q9Y2Q9 187 aaKnown RBP11.36□□□□□ -0.59
HDAC6-214ENST00000465269 PKD1P98161 4303 aa11.36□□□□□ -0.59
HDAC6-214ENST00000465269 GATBO75879 557 aaKnown RBP11.35□□□□□ -0.59
HDAC6-214ENST00000465269 CDK1P06493 297 aa11.35□□□□□ -0.59
HDAC6-214ENST00000465269 LIMS3P0CW19 117 aa11.35□□□□□ -0.59
HDAC6-214ENST00000465269 LIMS4P0CW20 117 aa11.35□□□□□ -0.59
HDAC6-214ENST00000465269 MYL12AP19105 171 aa11.35□□□□□ -0.59
HDAC6-214ENST00000465269 MMDQ15546 238 aa11.35□□□□□ -0.59
HDAC6-214ENST00000465269 RBM48Q5RL73 367 aaKnown RBP11.35□□□□□ -0.59
HDAC6-214ENST00000465269 IL34Q6ZMJ4 242 aa11.35□□□□□ -0.59
HDAC6-214ENST00000465269 RDH10Q8IZV5 341 aa11.35□□□□□ -0.59
HDAC6-214ENST00000465269 ZNF565Q8N9K5 539 aa11.35□□□□□ -0.59
HDAC6-214ENST00000465269 ADAT3Q96EY9 351 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-214ENST00000465269 C4orf36Q96KX1 117 aa11.35□□□□□ -0.59
HDAC6-214ENST00000465269 MOB1AQ9H8S9 216 aa11.35□□□□□ -0.59
HDAC6-214ENST00000465269 LINC00574Q9H8X3 128 aa11.35□□□□□ -0.59
HDAC6-214ENST00000465269 CHCHD3Q9NX63 227 aaKnown RBP11.35□□□□□ -0.59
HDAC6-214ENST00000465269 ZNF581Q9P0T4 197 aa11.35□□□□□ -0.59
HDAC6-214ENST00000465269 EXOSC1Q9Y3B2 195 aaKnown RBP11.35□□□□□ -0.59
HDAC6-214ENST00000465269 SNX5Q9Y5X3 404 aa11.35□□□□□ -0.59
HDAC6-214ENST00000465269 HSPG2P98160 4391 aa11.35□□□□□ -0.59
HDAC6-214ENST00000465269 SULT1C4O75897 302 aa11.34□□□□□ -0.59
HDAC6-214ENST00000465269 PRR20EP86478 221 aa11.34□□□□□ -0.59
HDAC6-214ENST00000465269 PRR20CP86479 221 aa11.34□□□□□ -0.59
HDAC6-214ENST00000465269 PRR20DP86480 221 aa11.34□□□□□ -0.59
HDAC6-214ENST00000465269 PRR20BP86481 221 aa11.34□□□□□ -0.59
HDAC6-214ENST00000465269 PRR20AP86496 221 aa11.34□□□□□ -0.59
HDAC6-214ENST00000465269 PAN3Q58A45 887 aaKnown RBP11.34□□□□□ -0.59
HDAC6-214ENST00000465269 OR2G6Q5TZ20 316 aa11.34□□□□□ -0.59
HDAC6-214ENST00000465269 CEMP1Q6PRD7 247 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-214ENST00000465269 FAM220AQ7Z4H9 259 aa11.34□□□□□ -0.59
HDAC6-214ENST00000465269 KCTD20Q7Z5Y7 419 aa11.34□□□□□ -0.59
HDAC6-214ENST00000465269 OR8H1Q8NGG4 311 aa11.34□□□□□ -0.59
HDAC6-214ENST00000465269 MRPL48Q96GC5 212 aaKnown RBP11.34□□□□□ -0.59
HDAC6-214ENST00000465269 NR1H4Q96RI1 486 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-214ENST00000465269 CCDC90BQ9GZT6 254 aa11.34□□□□□ -0.59
HDAC6-214ENST00000465269 DUSP21Q9H596 190 aa11.34□□□□□ -0.59
HDAC6-214ENST00000465269 TRAV24A0A0B4J272 114 aa11.33□□□□□ -0.6
HDAC6-214ENST00000465269 SHISA3A0PJX4 238 aa11.33□□□□□ -0.6
HDAC6-214ENST00000465269 RGS10O43665 173 aa11.33□□□□□ -0.6
HDAC6-214ENST00000465269 KDM4BO94953 1096 aa11.33□□□□□ -0.6
HDAC6-214ENST00000465269 CD81P60033 236 aa11.33□□□□□ -0.6
HDAC6-214ENST00000465269 C19orf54Q5BKX5 351 aa11.33□□□□□ -0.6
HDAC6-214ENST00000465269 RSBN1Q5VWQ0 802 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-214ENST00000465269 FLYWCH2Q96CP2 140 aaKnown RBP11.33□□□□□ -0.6
HDAC6-214ENST00000465269 PELI1Q96FA3 418 aa11.33□□□□□ -0.6
HDAC6-214ENST00000465269 JAM3Q9BX67 310 aa11.33□□□□□ -0.6
HDAC6-214ENST00000465269 NUPR2A6NF83 97 aa11.32□□□□□ -0.6
HDAC6-214ENST00000465269 E9PI62 339 aa11.32□□□□□ -0.6
HDAC6-214ENST00000465269 SERPINA3P01011 423 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms