RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 VAX2Q9UIW0 290 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 CNOT4O95628 575 aaKnown RBP10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 BMP5P22003 454 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 OR8G2PQ6IF36 304 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 RPP25LQ8N5L8 163 aaKnown RBP10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 MBD3L1Q8WWY6 194 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 DNASE2BQ8WZ79 361 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 LHX4Q969G2 390 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 PPP1R3CQ9UQK1 317 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 H0Y980 276 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 SYNGR1O43759 233 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 CST2P09228 141 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 PMS2P11Q13670 270 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 GUSBP11Q6P575 273 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 DPPA3Q6W0C5 159 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 AAED1Q7RTV5 226 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 OR51G1Q8NGK1 321 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 NEU1Q99519 415 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 FOXB1Q99853 325 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 NDUFAF3Q9BU61 184 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 OR1A1Q9P1Q5 309 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 A0A096LPE4 126 aa10.72□□□□□ -0.69
CLCNKA-204ENST00000464764 A0A1W2PPZ6 126 aa10.72□□□□□ -0.69
CLCNKA-204ENST00000464764 A0A1W2PQM1 296 aa10.72□□□□□ -0.69
CLCNKA-204ENST00000464764 CXCL13O43927 109 aa10.72□□□□□ -0.69
CLCNKA-204ENST00000464764 GALR1P47211 349 aa10.72□□□□□ -0.69
CLCNKA-204ENST00000464764 IDH3GP51553 393 aaPredicted RBP10.72□□□□□ -0.69
CLCNKA-204ENST00000464764 NUBP1P53384 320 aa10.72□□□□□ -0.69
CLCNKA-204ENST00000464764 SPCS3P61009 180 aa10.72□□□□□ -0.69
CLCNKA-204ENST00000464764 RPL23P62829 140 aaKnown RBP10.72□□□□□ -0.69
CLCNKA-204ENST00000464764 TMEM241Q24JQ0 296 aa10.72□□□□□ -0.69
CLCNKA-204ENST00000464764 DNLZQ5SXM8 178 aa10.72□□□□□ -0.69
CLCNKA-204ENST00000464764 SLC25A22Q9H936 323 aa10.72□□□□□ -0.69
CLCNKA-204ENST00000464764 RARRES3Q9UL19 164 aa10.72□□□□□ -0.69
CLCNKA-204ENST00000464764 UBE2L5PA0A1B0GUS4 154 aa10.72□□□□□ -0.69
CLCNKA-204ENST00000464764 SYNGR2O43760 224 aa10.72□□□□□ -0.69
CLCNKA-204ENST00000464764 CD33P20138 364 aa10.72□□□□□ -0.69
CLCNKA-204ENST00000464764 MLF1P58340 268 aa10.72□□□□□ -0.69
CLCNKA-204ENST00000464764 BSXQ3C1V8 233 aa10.72□□□□□ -0.69
CLCNKA-204ENST00000464764 MRGPRGQ86SM5 289 aa10.72□□□□□ -0.69
CLCNKA-204ENST00000464764 CARFQ8N187 725 aa10.72□□□□□ -0.69
CLCNKA-204ENST00000464764 ABHD14BQ96IU4 210 aa10.72□□□□□ -0.69
CLCNKA-204ENST00000464764 HIPK2Q9H2X6 1198 aa10.72□□□□□ -0.69
CLCNKA-204ENST00000464764 CBLN4Q9NTU7 201 aa10.72□□□□□ -0.69
CLCNKA-204ENST00000464764 SLC39A9Q9NUM3 307 aa10.72□□□□□ -0.69
CLCNKA-204ENST00000464764 OCIAD1Q9NX40 245 aa10.72□□□□□ -0.69
CLCNKA-204ENST00000464764 PPP5D1E7EU14 171 aa10.71□□□□□ -0.69
CLCNKA-204ENST00000464764 IGKV1-5P01602 117 aa10.71□□□□□ -0.69
CLCNKA-204ENST00000464764 EGR1P18146 543 aa10.71□□□□□ -0.69
CLCNKA-204ENST00000464764 MAP1BP46821 2468 aaKnown RBP10.71□□□□□ -0.69
CLCNKA-204ENST00000464764 DSCR4P56555 118 aaPredicted RBP10.71□□□□□ -0.69
CLCNKA-204ENST00000464764 FAM3BP58499 235 aaPredicted RBP10.71□□□□□ -0.69
CLCNKA-204ENST00000464764 FOXO1Q12778 655 aa10.71□□□□□ -0.69
CLCNKA-204ENST00000464764 PCOLCEQ15113 449 aa10.71□□□□□ -0.69
CLCNKA-204ENST00000464764 TRIM61Q5EBN2 209 aa10.71□□□□□ -0.69
CLCNKA-204ENST00000464764 KMT5CQ86Y97 462 aa10.71□□□□□ -0.69
CLCNKA-204ENST00000464764 ACTR3CQ9C0K3 210 aaPredicted RBP10.71□□□□□ -0.69
CLCNKA-204ENST00000464764 FSCN3Q9NQT6 498 aa10.71□□□□□ -0.69
CLCNKA-204ENST00000464764 TP53TG5Q9Y2B4 290 aa10.71□□□□□ -0.69
CLCNKA-204ENST00000464764 ATP23Q9Y6H3 246 aa10.71□□□□□ -0.69
CLCNKA-204ENST00000464764 H7BYZ3 331 aa10.71□□□□□ -0.69
CLCNKA-204ENST00000464764 CCL7P80098 99 aa10.71□□□□□ -0.69
CLCNKA-204ENST00000464764 PRDX4Q13162 271 aa10.71□□□□□ -0.69
CLCNKA-204ENST00000464764 TEX38Q6PEX7 206 aa10.71□□□□□ -0.69
CLCNKA-204ENST00000464764 RNASEH2CQ8TDP1 164 aaKnown RBP10.71□□□□□ -0.69
CLCNKA-204ENST00000464764 ABHD3Q8WU67 409 aa10.71□□□□□ -0.69
CLCNKA-204ENST00000464764 SNHG12Q9BXW3 62 aa10.71□□□□□ -0.69
CLCNKA-204ENST00000464764 MRPL37Q9BZE1 423 aaKnown RBP10.71□□□□□ -0.69
CLCNKA-204ENST00000464764 NAT8Q9UHE5 227 aa10.71□□□□□ -0.69
CLCNKA-204ENST00000464764 RFPL3SP0C7P2 107 aa10.71□□□□□ -0.7
CLCNKA-204ENST00000464764 CARD18P57730 90 aa10.71□□□□□ -0.7
CLCNKA-204ENST00000464764 NUTF2P61970 127 aaKnown RBP10.71□□□□□ -0.7
CLCNKA-204ENST00000464764 SLC10A1Q14973 349 aa10.71□□□□□ -0.7
CLCNKA-204ENST00000464764 LRRC75BQ2VPJ9 315 aa10.71□□□□□ -0.7
CLCNKA-204ENST00000464764 MRPL41Q8IXM3 137 aaKnown RBP10.71□□□□□ -0.7
CLCNKA-204ENST00000464764 RAB40CQ96S21 281 aa10.71□□□□□ -0.7
CLCNKA-204ENST00000464764 CD300LBA8K4G0 201 aa10.7□□□□□ -0.7
CLCNKA-204ENST00000464764 FKBP2P26885 142 aaKnown RBP10.7□□□□□ -0.7
CLCNKA-204ENST00000464764 RAC1P63000 192 aa10.7□□□□□ -0.7
CLCNKA-204ENST00000464764 ZNF324BQ6AW86 544 aaPredicted RBP10.7□□□□□ -0.7
CLCNKA-204ENST00000464764 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.7□□□□□ -0.7
CLCNKA-204ENST00000464764 SMRP1Q8NCR6 262 aa10.7□□□□□ -0.7
CLCNKA-204ENST00000464764 MRPL30Q8TCC3 161 aaKnown RBP10.7□□□□□ -0.7
CLCNKA-204ENST00000464764 RAB24Q969Q5 203 aa10.7□□□□□ -0.7
CLCNKA-204ENST00000464764 ZNF845Q96IR2 970 aaPredicted RBP10.7□□□□□ -0.7
CLCNKA-204ENST00000464764 SGCZQ96LD1 299 aa10.7□□□□□ -0.7
CLCNKA-204ENST00000464764 CTDSP1Q9GZU7 261 aa10.7□□□□□ -0.7
CLCNKA-204ENST00000464764 PARLQ9H300 379 aa10.7□□□□□ -0.7
CLCNKA-204ENST00000464764 OR51B6Q9H340 312 aa10.7□□□□□ -0.7
CLCNKA-204ENST00000464764 IGHV3-64DA0A0J9YX35 117 aa10.7□□□□□ -0.7
CLCNKA-204ENST00000464764 ZNF716A6NP11 495 aa10.7□□□□□ -0.7
CLCNKA-204ENST00000464764 LILRA1O75019 489 aa10.7□□□□□ -0.7
CLCNKA-204ENST00000464764 CHRNA7P36544 502 aa10.7□□□□□ -0.7
CLCNKA-204ENST00000464764 FOXG1P55316 489 aaPredicted RBP10.7□□□□□ -0.7
CLCNKA-204ENST00000464764 PMP22Q01453 160 aa10.7□□□□□ -0.7
CLCNKA-204ENST00000464764 MEF2BQ02080 365 aaPredicted RBP10.7□□□□□ -0.7
CLCNKA-204ENST00000464764 PAX5Q02548 391 aa10.7□□□□□ -0.7
CLCNKA-204ENST00000464764 KRTAP27-1Q3LI81 207 aa10.7□□□□□ -0.7
CLCNKA-204ENST00000464764 TMEM41BQ5BJD5 291 aa10.7□□□□□ -0.7
CLCNKA-204ENST00000464764 ACSM6Q6P461 480 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms