RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 RSRP1Q9BUV0 290 aa12.75□□□□□ -0.37
GYPC-205ENST00000464053 MED28Q9H204 178 aa12.75□□□□□ -0.37
GYPC-205ENST00000464053 OR2S2Q9NQN1 319 aa12.75□□□□□ -0.37
GYPC-205ENST00000464053 OPN4Q9UHM6 478 aa12.75□□□□□ -0.37
GYPC-205ENST00000464053 C14orf166Q9Y224 244 aaKnown RBP12.75□□□□□ -0.37
GYPC-205ENST00000464053 KBTBD11-OT1A0A1B0GTJ5 212 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 C9orf170A2RU37 121 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 SNRPGP15A8MWD9 76 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 SSNA1O43805 119 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 CREBL2O60519 120 aaPredicted RBP12.74□□□□□ -0.37
GYPC-205ENST00000464053 HLA-AP01891 365 aaKnown RBP12.74□□□□□ -0.37
GYPC-205ENST00000464053 WNT2P09544 360 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 GPR6P46095 362 aaPredicted RBP12.74□□□□□ -0.37
GYPC-205ENST00000464053 ERVFRD-1P60508 538 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 SUPT4H1P63272 117 aaKnown RBP12.74□□□□□ -0.37
GYPC-205ENST00000464053 HTD2P86397 168 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 PHLDA2Q53GA4 152 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 TMEM128Q5BJH2 165 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 SLC38A6Q8IZM9 456 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 ZNF431Q8TF32 576 aaPredicted RBP12.74□□□□□ -0.37
GYPC-205ENST00000464053 CCL28Q9NRJ3 127 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 CLN8Q9UBY8 286 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 hADV38S2A0JD32 116 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 F2RL2O00254 374 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 MMP23AO75900 390 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 CCL3L1P16619 93 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 VAMP1P23763 118 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 PIGPP57054 158 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 LOXL3P58215 753 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 TAS2R31P59538 309 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 KRTAP10-9P60411 292 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 FAHD2BQ6P2I3 314 aaPredicted RBP12.74□□□□□ -0.37
GYPC-205ENST00000464053 ZNF818PQ6ZRF7 136 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 LYG2Q86SG7 212 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 OR11H7Q8NGC8 314 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 FAHD2AQ96GK7 314 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 PSMG3-AS1Q96PY0 264 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 SLC5A7Q9GZV3 580 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 TOLLIPQ9H0E2 274 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 MIOXQ9UGB7 285 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 LINC00312Q9Y6C7 94 aa12.74□□□□□ -0.37
GYPC-205ENST00000464053 HSD17B6O14756 317 aa12.73□□□□□ -0.37
GYPC-205ENST00000464053 CXCL3P19876 107 aa12.73□□□□□ -0.37
GYPC-205ENST00000464053 MEF2CQ06413 473 aaPredicted RBP12.73□□□□□ -0.37
GYPC-205ENST00000464053 C2orf68Q2NKX9 166 aa12.73□□□□□ -0.37
GYPC-205ENST00000464053 HIST2H2BCQ6DN03 193 aa12.73□□□□□ -0.37
GYPC-205ENST00000464053 AKAP14Q86UN6 197 aa12.73□□□□□ -0.37
GYPC-205ENST00000464053 FAM185AQ8N0U4 392 aa12.73□□□□□ -0.37
GYPC-205ENST00000464053 NEIL1Q96FI4 390 aaPredicted RBP12.73□□□□□ -0.37
GYPC-205ENST00000464053 GPHA2Q96T91 129 aa12.73□□□□□ -0.37
GYPC-205ENST00000464053 SLC2A9Q9NRM0 540 aa12.73□□□□□ -0.37
GYPC-205ENST00000464053 PRR13Q9NZ81 148 aa12.73□□□□□ -0.37
GYPC-205ENST00000464053 UBE2J1Q9Y385 318 aaPredicted RBP12.73□□□□□ -0.37
GYPC-205ENST00000464053 MALRD1Q5VYJ5 2156 aa12.73□□□□□ -0.37
GYPC-205ENST00000464053 GCN1Q92616 2671 aaKnown RBP12.73□□□□□ -0.37
GYPC-205ENST00000464053 ZNF729A6NN14 1252 aaPredicted RBP12.72□□□□□ -0.37
GYPC-205ENST00000464053 IGLV2-14P01704 120 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 IGHV3-7P01780 117 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 OR8U9P0C7N5 309 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 TRAPPC2P0DI81 140 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 TRAPPC2BP0DI82 140 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 LUMP51884 338 aaPredicted RBP12.72□□□□□ -0.37
GYPC-205ENST00000464053 SLC9A3R2Q15599 337 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 ABCA11PQ4W5N1 156 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 CD276Q5ZPR3 534 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 ZNF787Q6DD87 383 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 SPICQ8N5J4 248 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 UXS1Q8NBZ7 420 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 OR8B3Q8NGG8 313 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 OR8U1Q8NH10 309 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 CASTOR1Q8WTX7 329 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 NINJ1Q92982 152 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 OR8B2Q96RD0 313 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 LINC00574Q9H8X3 128 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 ASH1LQ9NR48 2969 aaKnown RBP12.72□□□□□ -0.37
GYPC-205ENST00000464053 ARID1AO14497 2285 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 CRYM-AS1A6NIL9 109 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 CCNKO75909 580 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 SULT1A3P0DMM9 295 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 SULT1A4P0DMN0 295 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 CD83Q01151 205 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 MORN2Q502X0 79 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 PRAMEF5Q5TYX0 476 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 WDR25Q64LD2 544 aaPredicted RBP12.72□□□□□ -0.37
GYPC-205ENST00000464053 LIN54Q6MZP7 749 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 LEAP2Q969E1 77 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 ST6GAL2Q96JF0 529 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 PATZ1Q9HBE1 687 aaKnown RBP12.72□□□□□ -0.37
GYPC-205ENST00000464053 TAS2R3Q9NYW6 316 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 GNG12Q9UBI6 72 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 JPT1Q9UK76 154 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 RNF150Q9ULK6 438 aa12.72□□□□□ -0.37
GYPC-205ENST00000464053 NBPF19A0A087WUL8 3843 aa12.71□□□□□ -0.37
GYPC-205ENST00000464053 VPS13CQ709C8 3753 aa12.71□□□□□ -0.37
GYPC-205ENST00000464053 F5H0A9 414 aaPredicted RBP12.71□□□□□ -0.38
GYPC-205ENST00000464053 PHF1O43189 567 aaPredicted RBP12.71□□□□□ -0.38
GYPC-205ENST00000464053 SFT2D2O95562 160 aa12.71□□□□□ -0.38
GYPC-205ENST00000464053 ATP5J2P56134 94 aa12.71□□□□□ -0.38
GYPC-205ENST00000464053 LPCAT3Q6P1A2 487 aa12.71□□□□□ -0.38
GYPC-205ENST00000464053 NLRC3Q7RTR2 1065 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms