RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 SPRNQ5BIV9 151 aa6.09□□□□□ -1.43
UBE4B-204ENST00000462658 HIST2H2BDQ6DRA6 164 aa6.09□□□□□ -1.43
UBE4B-204ENST00000462658 STEAP1BQ6NZ63 245 aa6.09□□□□□ -1.43
UBE4B-204ENST00000462658 GVQW1Q8N7I0 195 aa6.09□□□□□ -1.43
UBE4B-204ENST00000462658 DUSP18Q8NEJ0 188 aa6.09□□□□□ -1.43
UBE4B-204ENST00000462658 ITLN1Q8WWA0 313 aa6.09□□□□□ -1.43
UBE4B-204ENST00000462658 DEDD2Q8WXF8 326 aa6.09□□□□□ -1.43
UBE4B-204ENST00000462658 DHRS9Q9BPW9 319 aa6.09□□□□□ -1.43
UBE4B-204ENST00000462658 CMSS1Q9BQ75 279 aaKnown RBP6.09□□□□□ -1.43
UBE4B-204ENST00000462658 SULT4A1Q9BR01 284 aa6.09□□□□□ -1.43
UBE4B-204ENST00000462658 TMEM204Q9BSN7 226 aa6.09□□□□□ -1.43
UBE4B-204ENST00000462658 ST6GALNAC5Q9BVH7 336 aa6.09□□□□□ -1.43
UBE4B-204ENST00000462658 FN3KRPQ9HA64 309 aa6.09□□□□□ -1.43
UBE4B-204ENST00000462658 HES4Q9HCC6 221 aa6.09□□□□□ -1.43
UBE4B-204ENST00000462658 OR6C3Q9NZP0 311 aa6.09□□□□□ -1.43
UBE4B-204ENST00000462658 ZNF107Q9UII5 783 aaPredicted RBP6.09□□□□□ -1.43
UBE4B-204ENST00000462658 AK3Q9UIJ7 227 aa6.09□□□□□ -1.43
UBE4B-204ENST00000462658 LSM4Q9Y4Z0 139 aaKnown RBP6.09□□□□□ -1.43
UBE4B-204ENST00000462658 CELSR2Q9HCU4 2923 aa6.09□□□□□ -1.43
UBE4B-204ENST00000462658 ITPR2Q14571 2701 aa6.09□□□□□ -1.43
UBE4B-204ENST00000462658 UNC79Q9P2D8 2635 aa6.09□□□□□ -1.44
UBE4B-204ENST00000462658 ZNF469Q96JG9 3925 aaPredicted RBP6.08□□□□□ -1.44
UBE4B-204ENST00000462658 CSMD2Q7Z408 3487 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 VPS13CQ709C8 3753 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 ZNF736B4DX44 427 aaPredicted RBP6.08□□□□□ -1.44
UBE4B-204ENST00000462658 MCRIP1C9JLW8 97 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 C19orf84I3L1E1 186 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 M0R233 179 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 HS3ST1O14792 307 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 SH2D1BO14796 132 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 WNT9BO14905 357 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 RAB3DO95716 219 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 GLAP06280 429 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 CD55P08174 381 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 ZNF44P15621 663 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 GLRA1P23415 457 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 GIFP27352 417 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 HLA-DMAP28067 261 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 BTCP35070 178 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 CFHR2P36980 270 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 ZNF146Q15072 292 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 SPIN3Q5JUX0 258 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 Q6P435 159 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 FIP1L1Q6UN15 594 aaKnown RBP6.08□□□□□ -1.44
UBE4B-204ENST00000462658 PLET1Q6UQ28 207 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 ACP7Q6ZNF0 438 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 HOGA1Q86XE5 327 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 SUMF2Q8NBJ7 301 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 OR4S1Q8NGB4 309 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 OR4C16Q8NGL9 310 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 OR10Z1Q8NGY1 313 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 FAM222BQ8WU58 562 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 LRRC29Q8WV35 223 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 HDHD3Q9BSH5 251 aaPredicted RBP6.08□□□□□ -1.44
UBE4B-204ENST00000462658 CACNG6Q9BXT2 260 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 WDR13Q9H1Z4 485 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 MMP28Q9H239 520 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 DPAGT1Q9H3H5 408 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 SPACA1Q9HBV2 294 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 DYNLRB1Q9NP97 96 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 MCUBQ9NWR8 336 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 RASL12Q9NYN1 266 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 RCC2Q9P258 522 aaKnown RBP6.08□□□□□ -1.44
UBE4B-204ENST00000462658 GLS2Q9UI32 602 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 ANAPC10Q9UM13 185 aa6.08□□□□□ -1.44
UBE4B-204ENST00000462658 CENPEQ02224 2701 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 TRAV24A0A0B4J272 114 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 SRRM5B3KS81 715 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 SIRPB1O00241 398 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 OR2H2O95918 312 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 HAND1O96004 215 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 LHBP01229 141 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 CD74P04233 296 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 TCRBP04435 133 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 DTYMKP23919 212 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 RBMXP38159 391 aaKnown RBP6.07□□□□□ -1.44
UBE4B-204ENST00000462658 CCR6P51684 374 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 CCL8P80075 99 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 RBM39Q14498 530 aaKnown RBP6.07□□□□□ -1.44
UBE4B-204ENST00000462658 MEF2DQ14814 521 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 SMIM21Q3B7S5 101 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 RNASE10Q5GAN6 216 aaKnown RBP6.07□□□□□ -1.44
UBE4B-204ENST00000462658 OR52W1Q6IF63 320 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 FAAP20Q6NZ36 180 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 ZCCHC24Q8N2G6 241 aaKnown RBP6.07□□□□□ -1.44
UBE4B-204ENST00000462658 MUC15Q8N387 334 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 BPIFB2Q8N4F0 458 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 GCSAMQ8N6F7 178 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 BEST4Q8NFU0 473 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 OR4D10Q8NGI6 311 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 OR11L1Q8NGX0 322 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 OR4K15Q8NH41 348 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 OR56B4Q8NH76 319 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 NEK7Q8TDX7 302 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 DYRK2Q92630 601 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 RDH5Q92781 318 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 EGLN1Q9GZT9 426 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 CHST6Q9GZX3 395 aa6.07□□□□□ -1.44
UBE4B-204ENST00000462658 ZNF701Q9NV72 531 aaPredicted RBP6.07□□□□□ -1.44
UBE4B-204ENST00000462658 FAIMQ9NVQ4 179 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms