RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 HLA-DRB5Q30154 266 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 DEFB112Q30KQ8 113 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 ZNF260Q3ZCT1 412 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 C11orf42Q8N5U0 333 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 TMEM86BQ8N661 226 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 SIGLECL1Q8N7X8 197 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 C8orf31Q8N9H6 132 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 OR4A4PQ8NGN8 299 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 OR1L1Q8NH94 360 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 OR10J5Q8NHC4 309 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 MCFD2Q8NI22 146 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 DYNC2LI1Q8TCX1 351 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 SSMEM1Q8WWF3 244 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 TOMM40LQ969M1 308 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 DGCR14Q96DF8 476 aaKnown RBP5.2□□□□□ -1.58
SF3B1-206ENST00000462613 SLC25A38Q96DW6 304 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 YPEL2Q96QA6 119 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 OCSTAMPQ9BR26 566 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 DCUN1D5Q9BTE7 237 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 ST6GALNAC5Q9BVH7 336 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 GHITMQ9H3K2 345 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 Q9N2K0 584 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 RAB18Q9NP72 206 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 GFOD1Q9NXC2 390 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 DPM3Q9P2X0 92 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 SLC23A1Q9UHI7 598 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 PITPNC1Q9UKF7 332 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 PSG11Q9UQ72 335 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 MRPS7Q9Y2R9 242 aaKnown RBP5.2□□□□□ -1.58
SF3B1-206ENST00000462613 CEPT1Q9Y6K0 416 aa5.2□□□□□ -1.58
SF3B1-206ENST00000462613 IGHV3-43A0A0B4J1X8 118 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 ODF3BA8MYP8 253 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 C15orf65H3BRN8 121 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 BUB1B-PAK6H3BSN5 160 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 BET1O15155 118 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 HPGDSO60760 199 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 MMP23AO75900 390 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 GAPDHP04406 335 aaKnown RBP5.19□□□□□ -1.58
SF3B1-206ENST00000462613 MELTFP08582 738 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 IGHV3-43DP0DP04 118 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 OR3A3P47888 321 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 DLX1P56177 255 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 TAS2R46P59540 309 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 TAS2R20P59543 309 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 ACTBP60709 375 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 RPL15P61313 204 aaKnown RBP5.19□□□□□ -1.58
SF3B1-206ENST00000462613 ACTG1P63261 375 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 MRPS10P82664 201 aaKnown RBP5.19□□□□□ -1.58
SF3B1-206ENST00000462613 PRB3Q04118 309 aaPredicted RBP5.19□□□□□ -1.58
SF3B1-206ENST00000462613 AANATQ16613 207 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 MORN2Q502X0 79 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 LY6G6FQ5SQ64 297 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 ZNF880Q6PDB4 577 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 CNIH2Q6PI25 160 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 Q6YL49 198 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 Q6ZS49 121 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 LDLRAD3Q86YD5 345 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 IZUMO1Q8IYV9 350 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 BCL6BQ8N143 479 aaPredicted RBP5.19□□□□□ -1.58
SF3B1-206ENST00000462613 OR8H3Q8N146 312 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 LYG1Q8N1E2 194 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 PIP4P2Q8N4L2 257 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 LINC00311Q8N616 119 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 BEST4Q8NFU0 473 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 OR10V1Q8NGI7 309 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 UBALD1Q8TB05 177 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 FAM216AQ8WUB2 273 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 ZFAND2BQ8WV99 257 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 NUDCD2Q8WVJ2 157 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 GCDHQ92947 438 aaPredicted RBP5.19□□□□□ -1.58
SF3B1-206ENST00000462613 DIRAS2Q96HU8 199 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 AKR1E2Q96JD6 320 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 S1PR3Q99500 378 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 SSX3Q99909 188 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 HDHD3Q9BSH5 251 aaPredicted RBP5.19□□□□□ -1.58
SF3B1-206ENST00000462613 ABHD14AQ9BUJ0 271 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 MMP27Q9H306 513 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 AUNIPQ9H7T9 357 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 SCPEP1Q9HB40 452 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 BATF3Q9NR55 127 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 PIPOXQ9P0Z9 390 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 ZNRD1Q9P1U0 126 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 EXTL2Q9UBQ6 330 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 ZNF221Q9UK13 617 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 KCNK7Q9Y2U2 307 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 HILPDAQ9Y5L2 63 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 A3GALT2U3KPV4 340 aa5.19□□□□□ -1.58
SF3B1-206ENST00000462613 VPS13CQ709C8 3753 aa5.18□□□□□ -1.58
SF3B1-206ENST00000462613 NIPBLQ6KC79 2804 aaeCLIP5.18□□□□□ -1.58
SF3B1-206ENST00000462613 DNAJC9-AS1A6NH13 148 aa5.18□□□□□ -1.58
SF3B1-206ENST00000462613 H3BUX3 64 aa5.18□□□□□ -1.58
SF3B1-206ENST00000462613 CLDN34H7C241 214 aa5.18□□□□□ -1.58
SF3B1-206ENST00000462613 SULT1C2O00338 296 aa5.18□□□□□ -1.58
SF3B1-206ENST00000462613 ITGB1BP1O14713 200 aa5.18□□□□□ -1.58
SF3B1-206ENST00000462613 HSD17B6O14756 317 aa5.18□□□□□ -1.58
SF3B1-206ENST00000462613 RAB29O14966 203 aa5.18□□□□□ -1.58
SF3B1-206ENST00000462613 HOXA3O43365 443 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-206ENST00000462613 RBBP9O75884 186 aa5.18□□□□□ -1.58
SF3B1-206ENST00000462613 IGLV1-47P01700 117 aa5.18□□□□□ -1.58
SF3B1-206ENST00000462613 IGHV3-7P01780 117 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms