RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 CEACAM6P40199 344 aa8.78□□□□□ -1
RTF1-202ENST00000462276 RFX2P48378 723 aa8.78□□□□□ -1
RTF1-202ENST00000462276 RAB7AP51149 207 aa8.78□□□□□ -1
RTF1-202ENST00000462276 ERVFRD-1P60508 538 aa8.78□□□□□ -1
RTF1-202ENST00000462276 LCN2P80188 198 aa8.78□□□□□ -1
RTF1-202ENST00000462276 SURF2Q15527 256 aaPredicted RBP8.78□□□□□ -1
RTF1-202ENST00000462276 RGS21Q2M5E4 152 aa8.78□□□□□ -1
RTF1-202ENST00000462276 IGSF11Q5DX21 431 aa8.78□□□□□ -1
RTF1-202ENST00000462276 ZNF782Q6ZMW2 699 aaPredicted RBP8.78□□□□□ -1
RTF1-202ENST00000462276 H1FOOQ8IZA3 346 aaPredicted RBP8.78□□□□□ -1
RTF1-202ENST00000462276 FGFRL1Q8N441 504 aa8.78□□□□□ -1
RTF1-202ENST00000462276 PRR18Q8N4B5 295 aa8.78□□□□□ -1
RTF1-202ENST00000462276 POC5Q8NA72 575 aa8.78□□□□□ -1
RTF1-202ENST00000462276 OR1L1Q8NH94 360 aa8.78□□□□□ -1
RTF1-202ENST00000462276 RFESDQ8TAC1 157 aa8.78□□□□□ -1
RTF1-202ENST00000462276 MAFIPQ8WZ33 124 aa8.78□□□□□ -1
RTF1-202ENST00000462276 TNFRSF14Q92956 283 aa8.78□□□□□ -1
RTF1-202ENST00000462276 HEXA-AS1Q9H8Q6 139 aa8.78□□□□□ -1
RTF1-202ENST00000462276 MCUBQ9NWR8 336 aa8.78□□□□□ -1
RTF1-202ENST00000462276 GFOD1Q9NXC2 390 aa8.78□□□□□ -1
RTF1-202ENST00000462276 TBC1D24Q9ULP9 559 aa8.78□□□□□ -1
RTF1-202ENST00000462276 OR2W1Q9Y3N9 320 aa8.78□□□□□ -1
RTF1-202ENST00000462276 SESN1Q9Y6P5 492 aa8.78□□□□□ -1
RTF1-202ENST00000462276 MED13LQ71F56 2210 aa8.78□□□□□ -1
RTF1-202ENST00000462276 IGKV1-6A0A0C4DH72 117 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 FAM240BA0A1B0GVZ2 78 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 FAM157AC9JC47 383 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 M0QYG6 137 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 SDCBPO00560 298 aaPredicted RBP8.77□□□□□ -1.01
RTF1-202ENST00000462276 BET1O15155 118 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 ZNF735P0CB33 412 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 IGHV1-8P0DP01 117 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 FCGR2CP31995 323 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 DVL1P1P54792 670 aaPredicted RBP8.77□□□□□ -1.01
RTF1-202ENST00000462276 UCP3P55916 312 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 LOXL3P58215 753 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 HERV-K104P61576 105 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 PAX8Q06710 450 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 HERPUD1Q15011 391 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 MSMO1Q15800 293 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 TMEM249Q2WGJ8 235 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 PLA1AQ53H76 456 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 METTL11BQ5VVY1 283 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 NCR3LG1Q68D85 454 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 ZNF660Q6AZW8 331 aaPredicted RBP8.77□□□□□ -1.01
RTF1-202ENST00000462276 C11orf42Q8N5U0 333 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 TEX29Q8N6K0 151 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 MINDY2Q8NBR6 621 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 DUSP18Q8NEJ0 188 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 WFDC11Q8NEX6 87 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 CYYR1Q96J86 154 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 SLC6A7Q99884 636 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 TINAGL1Q9GZM7 467 aaPredicted RBP8.77□□□□□ -1.01
RTF1-202ENST00000462276 C11orf54Q9H0W9 315 aaPredicted RBP8.77□□□□□ -1.01
RTF1-202ENST00000462276 ZNF69Q9UC07 566 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 INSIG2Q9Y5U4 225 aa8.77□□□□□ -1.01
RTF1-202ENST00000462276 LINC00854A0A1B0GVQ3 168 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 FAM172BPA6NC97 362 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 PPYP01298 95 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 CCL3L1P16619 93 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 S100GP29377 79 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 LUMP51884 338 aaPredicted RBP8.76□□□□□ -1.01
RTF1-202ENST00000462276 PRRX1P54821 245 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 ARF6P62330 175 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 RBMS2Q15434 407 aaKnown RBP8.76□□□□□ -1.01
RTF1-202ENST00000462276 MORN2Q502X0 79 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 CYB5R2Q6BCY4 276 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 IDO2Q6ZQW0 420 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 GLCCI1Q86VQ1 547 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 LHFPL1Q86WI0 220 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 LINC00311Q8N616 119 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 ZBTB34Q8NCN2 500 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 OR2AK2Q8NG84 335 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 OR4D10Q8NGI6 311 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 OR51S1Q8NGJ8 323 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 OR13D1Q8NGV5 346 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 OR56B4Q8NH76 319 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 ENKURQ8TC29 256 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 ZFAND1Q8TCF1 268 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 TMEM186Q96B77 213 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 CREB3L1Q96BA8 519 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 MOB3AQ96BX8 217 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 ZNF2Q9BSG1 426 aaPredicted RBP8.76□□□□□ -1.01
RTF1-202ENST00000462276 TMEM133Q9H2Q1 129 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 DPAGT1Q9H3H5 408 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 RDH8Q9NYR8 311 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 ONECUT1Q9UBC0 465 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 GAB2Q9UQC2 676 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 PRRC2AP48634 2157 aaKnown RBP8.76□□□□□ -1.01
RTF1-202ENST00000462276 OTOGQ6ZRI0 2925 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 PDZD2O15018 2839 aa8.76□□□□□ -1.01
RTF1-202ENST00000462276 NDUFB6O95139 128 aa8.75□□□□□ -1.01
RTF1-202ENST00000462276 NFYBP25208 207 aa8.75□□□□□ -1.01
RTF1-202ENST00000462276 RAG2P55895 527 aa8.75□□□□□ -1.01
RTF1-202ENST00000462276 SCGB2B2Q4G0G5 96 aa8.75□□□□□ -1.01
RTF1-202ENST00000462276 PRAMEF5Q5TYX0 476 aa8.75□□□□□ -1.01
RTF1-202ENST00000462276 DCAF12L2Q5VW00 463 aa8.75□□□□□ -1.01
RTF1-202ENST00000462276 C11orf88Q6PI97 169 aa8.75□□□□□ -1.01
RTF1-202ENST00000462276 SLC38A6Q8IZM9 456 aa8.75□□□□□ -1.01
RTF1-202ENST00000462276 ABHD12Q8N2K0 398 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms