RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 IGKV1-9A0A0C4DH69 117 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 CLEC18AA5D8T8 446 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 DHRS7CA6NNS2 312 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 CD300LBA8K4G0 201 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 DEFB108AA8MXU0 73 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 IQCF6A8MYZ5 107 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 SHISA9B4DS77 424 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 CASKO14936 926 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 RS1O15537 224 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 SULT1B1O43704 296 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 ARL6IP5O75915 188 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 CRYAAP02489 173 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 MAS1P04201 325 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 CD2P06729 351 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 SLC2A2P11168 524 aaPredicted RBP3.84□□□□□ -1.79
CSMD3-205ENST00000462254 ANXA3P12429 323 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 PLA2G2AP14555 144 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 ZNF12P17014 697 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 RAB3BP20337 219 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 MYL9P24844 172 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 HTR2BP41595 481 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 ATP1B3P54709 279 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 BRWD1-AS2P59051 145 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 EWSR1Q01844 656 aaKnown RBP eCLIP3.84□□□□□ -1.79
CSMD3-205ENST00000462254 PAX5Q02548 391 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 PSG7Q13046 419 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 KLF9Q13886 244 aaPredicted RBP3.84□□□□□ -1.79
CSMD3-205ENST00000462254 ATXN7L3Q14CW9 347 aaPredicted RBP3.84□□□□□ -1.79
CSMD3-205ENST00000462254 UBE2V2Q15819 145 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 HAGHQ16775 308 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 KIAA2026Q5HYC2 2103 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 TMEM42Q69YG0 159 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 OR2T2Q6IF00 324 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 ADAM5Q6NVV9 412 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 CLEC18BQ6UXF7 455 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 PAMR1Q6UXH9 720 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 UNQ6126/PRO20091Q6UXV3 157 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 Q6ZTK2 550 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 SSX8Q7RTT4 187 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 MOB3BQ86TA1 216 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 LRP11Q86VZ4 500 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 LYPD6Q86Y78 171 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 LINC00518Q8N0U6 118 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 CENPSQ8N2Z9 138 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 FAM89BQ8N5H3 189 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 POC1AQ8NBT0 407 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 ACBD4Q8NC06 268 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 CLEC18CQ8NCF0 446 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 CCDC54Q8NEL0 328 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 OR1M1Q8NGA1 313 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 OR5L1Q8NGL2 311 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 KLF14Q8TD94 323 aaPredicted RBP3.84□□□□□ -1.79
CSMD3-205ENST00000462254 CD300LFQ8TDQ1 290 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 SSC4DQ8WTU2 575 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 NPRL2Q8WTW4 380 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 HPSE2Q8WWQ2 592 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 NEUROG1Q92886 237 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 SLC25A46Q96AG3 418 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 CMBLQ96DG6 245 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 SPACA5Q96QH8 159 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 BCL2L14Q9BZR8 327 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 CHST5Q9GZS9 411 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 SLIRPQ9GZT3 109 aaKnown RBP3.84□□□□□ -1.79
CSMD3-205ENST00000462254 FGF23Q9GZV9 251 aaPredicted RBP3.84□□□□□ -1.79
CSMD3-205ENST00000462254 TPK1Q9H3S4 243 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 PLEKHA1Q9HB21 404 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 HIF1ANQ9NWT6 349 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 MYEF2Q9P2K5 600 aaKnown RBP3.84□□□□□ -1.79
CSMD3-205ENST00000462254 MBD2Q9UBB5 411 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 EIF3KQ9UBQ5 218 aaKnown RBP3.84□□□□□ -1.79
CSMD3-205ENST00000462254 ELF5Q9UKW6 265 aaPredicted RBP3.84□□□□□ -1.79
CSMD3-205ENST00000462254 AK6Q9Y3D8 172 aaKnown RBP3.84□□□□□ -1.79
CSMD3-205ENST00000462254 ANKHD1Q8IWZ3 2542 aaKnown RBP3.84□□□□□ -1.8
CSMD3-205ENST00000462254 CHD6Q8TD26 2715 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 IGLV3-9A0A075B6K5 115 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 IGKV1-27A0A075B6S5 117 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 ZNF816-ZNF321PA0A0X1KG74 233 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 A0A1W2PPR1 153 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 GGT3PA6NGU5 568 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 ZNF850A8MQ14 1090 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 E7EQL1 145 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 SPRY3O43610 288 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 GMDSO60547 372 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 NRASP01111 189 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 CD37P11049 281 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 ZNF250P15622 560 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 ATF1P18846 271 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 RAB3AP20336 220 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 KITLGP21583 273 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 CA6P23280 308 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 CFL1P23528 166 aaKnown RBP3.83□□□□□ -1.8
CSMD3-205ENST00000462254 CD80P33681 288 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 GLRXP35754 106 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 P2RY1P47900 373 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 FHITP49789 147 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 FABP6P51161 128 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 RIPPLY1Q0D2K3 151 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 HNRNPA0Q13151 305 aaKnown RBP3.83□□□□□ -1.8
CSMD3-205ENST00000462254 PRDX4Q13162 271 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 SRSF9Q13242 221 aaKnown RBP eCLIP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms