RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 ZNF554Q86TJ5 538 aa14.96□□□□□ -0.01
VARS-220ENST00000461874 MRPL30Q8TCC3 161 aaKnown RBP14.96□□□□□ -0.01
VARS-220ENST00000461874 PLSCR3Q9NRY6 295 aa14.96□□□□□ -0.01
VARS-220ENST00000461874 SCN3BQ9NY72 215 aa14.96□□□□□ -0.01
VARS-220ENST00000461874 KCNIP1Q9NZI2 227 aa14.96□□□□□ -0.01
VARS-220ENST00000461874 LINC00527Q9UJ94 153 aa14.96□□□□□ -0.01
VARS-220ENST00000461874 LINC01548A6NM66 108 aa14.95□□□□□ -0.02
VARS-220ENST00000461874 ZNF736B4DX44 427 aaPredicted RBP14.95□□□□□ -0.02
VARS-220ENST00000461874 TXNL1O43396 289 aa14.95□□□□□ -0.02
VARS-220ENST00000461874 MPIG6BO95866 241 aa14.95□□□□□ -0.02
VARS-220ENST00000461874 MOSP00540 346 aa14.95□□□□□ -0.02
VARS-220ENST00000461874 CD37P11049 281 aa14.95□□□□□ -0.02
VARS-220ENST00000461874 RPL23AP62750 156 aaKnown RBP14.95□□□□□ -0.02
VARS-220ENST00000461874 SLC35A2P78381 396 aa14.95□□□□□ -0.02
VARS-220ENST00000461874 IRF3Q14653 427 aa14.95□□□□□ -0.02
VARS-220ENST00000461874 OR10K2Q6IF99 312 aa14.95□□□□□ -0.02
VARS-220ENST00000461874 CEACAM19Q7Z692 300 aa14.95□□□□□ -0.02
VARS-220ENST00000461874 FOXRED2Q8IWF2 684 aa14.95□□□□□ -0.02
VARS-220ENST00000461874 STPG2Q8N412 459 aa14.95□□□□□ -0.02
VARS-220ENST00000461874 Q8N9W7 124 aa14.95□□□□□ -0.02
VARS-220ENST00000461874 NRG4Q8WWG1 115 aa14.95□□□□□ -0.02
VARS-220ENST00000461874 ABCG5Q9H222 651 aa14.95□□□□□ -0.02
VARS-220ENST00000461874 OR2S2Q9NQN1 319 aa14.95□□□□□ -0.02
VARS-220ENST00000461874 LIN7CQ9NUP9 197 aaKnown RBP14.95□□□□□ -0.02
VARS-220ENST00000461874 AURKAIP1Q9NWT8 199 aaPredicted RBP14.95□□□□□ -0.02
VARS-220ENST00000461874 VSIG8P0DPA2 414 aa14.94□□□□□ -0.02
VARS-220ENST00000461874 SRMP19623 302 aa14.94□□□□□ -0.02
VARS-220ENST00000461874 CHATP28329 748 aa14.94□□□□□ -0.02
VARS-220ENST00000461874 GPR12P47775 334 aa14.94□□□□□ -0.02
VARS-220ENST00000461874 AQP4P55087 323 aa14.94□□□□□ -0.02
VARS-220ENST00000461874 SLC35B1P78383 322 aa14.94□□□□□ -0.02
VARS-220ENST00000461874 MED22Q15528 200 aa14.94□□□□□ -0.02
VARS-220ENST00000461874 MORN2Q502X0 79 aa14.94□□□□□ -0.02
VARS-220ENST00000461874 NKAPLQ5M9Q1 402 aa14.94□□□□□ -0.02
VARS-220ENST00000461874 RBM48Q5RL73 367 aaKnown RBP14.94□□□□□ -0.02
VARS-220ENST00000461874 OR2W3Q7Z3T1 314 aa14.94□□□□□ -0.02
VARS-220ENST00000461874 COMMD1Q8N668 190 aa14.94□□□□□ -0.02
VARS-220ENST00000461874 MRAPQ8TCY5 172 aa14.94□□□□□ -0.02
VARS-220ENST00000461874 RCC1LQ96I51 464 aaKnown RBP14.94□□□□□ -0.02
VARS-220ENST00000461874 NEDD4LQ96PU5 975 aa14.94□□□□□ -0.02
VARS-220ENST00000461874 SULT4A1Q9BR01 284 aa14.94□□□□□ -0.02
VARS-220ENST00000461874 ZFP57Q9NU63 452 aa14.94□□□□□ -0.02
VARS-220ENST00000461874 AP4M1O00189 453 aa14.93□□□□□ -0.02
VARS-220ENST00000461874 LANCL1O43813 399 aa14.93□□□□□ -0.02
VARS-220ENST00000461874 UCHL1P09936 223 aa14.93□□□□□ -0.02
VARS-220ENST00000461874 RPS27AP62979 156 aaKnown RBP14.93□□□□□ -0.02
VARS-220ENST00000461874 HSD17B12Q53GQ0 312 aa14.93□□□□□ -0.02
VARS-220ENST00000461874 ETV3LQ6ZN32 361 aa14.93□□□□□ -0.02
VARS-220ENST00000461874 C5orf24Q7Z6I8 188 aa14.93□□□□□ -0.02
VARS-220ENST00000461874 LINC00482Q8N8I6 264 aa14.93□□□□□ -0.02
VARS-220ENST00000461874 OR51D1Q8NGF3 324 aa14.93□□□□□ -0.02
VARS-220ENST00000461874 OR8H1Q8NGG4 311 aa14.93□□□□□ -0.02
VARS-220ENST00000461874 OR52L2PQ8NGH6 319 aa14.93□□□□□ -0.02
VARS-220ENST00000461874 S1PR3Q99500 378 aa14.93□□□□□ -0.02
VARS-220ENST00000461874 TMEM59Q9BXS4 323 aa14.93□□□□□ -0.02
VARS-220ENST00000461874 DUSP21Q9H596 190 aa14.93□□□□□ -0.02
VARS-220ENST00000461874 JPT1Q9UK76 154 aa14.93□□□□□ -0.02
VARS-220ENST00000461874 SLC22A1O15245 554 aa14.92□□□□□ -0.02
VARS-220ENST00000461874 DUS4LO95620 317 aaKnown RBP14.92□□□□□ -0.02
VARS-220ENST00000461874 HTR2CP28335 458 aa14.92□□□□□ -0.02
VARS-220ENST00000461874 QRFPP83859 136 aa14.92□□□□□ -0.02
VARS-220ENST00000461874 HTD2P86397 168 aa14.92□□□□□ -0.02
VARS-220ENST00000461874 GNMTQ14749 295 aa14.92□□□□□ -0.02
VARS-220ENST00000461874 LIPKQ5VXJ0 399 aa14.92□□□□□ -0.02
VARS-220ENST00000461874 C18orf65Q6ZTR6 163 aa14.92□□□□□ -0.02
VARS-220ENST00000461874 MRPL41Q8IXM3 137 aaKnown RBP14.92□□□□□ -0.02
VARS-220ENST00000461874 KCNG3Q8TAE7 436 aa14.92□□□□□ -0.02
VARS-220ENST00000461874 UFD1Q92890 307 aa14.92□□□□□ -0.02
VARS-220ENST00000461874 RBMXL1Q96E39 390 aaKnown RBP14.92□□□□□ -0.02
VARS-220ENST00000461874 RASL11BQ9BPW5 248 aa14.92□□□□□ -0.02
VARS-220ENST00000461874 FAAP24Q9BTP7 215 aa14.92□□□□□ -0.02
VARS-220ENST00000461874 TM2D1Q9BX74 207 aa14.92□□□□□ -0.02
VARS-220ENST00000461874 TPRKBQ9Y3C4 175 aa14.92□□□□□ -0.02
VARS-220ENST00000461874 LRRC42Q9Y546 428 aa14.92□□□□□ -0.02
VARS-220ENST00000461874 YPEL1O60688 119 aa14.91□□□□□ -0.02
VARS-220ENST00000461874 MYF6P23409 242 aa14.91□□□□□ -0.02
VARS-220ENST00000461874 SLC6A1P30531 599 aa14.91□□□□□ -0.02
VARS-220ENST00000461874 PPP1CCP36873 323 aaKnown RBP14.91□□□□□ -0.02
VARS-220ENST00000461874 F2RL1P55085 397 aa14.91□□□□□ -0.02
VARS-220ENST00000461874 UNC119Q13432 240 aa14.91□□□□□ -0.02
VARS-220ENST00000461874 TPBGQ13641 420 aa14.91□□□□□ -0.02
VARS-220ENST00000461874 LY6G6FQ5SQ64 297 aa14.91□□□□□ -0.02
VARS-220ENST00000461874 TEX38Q6PEX7 206 aa14.91□□□□□ -0.02
VARS-220ENST00000461874 C6orf201Q7Z4U5 140 aa14.91□□□□□ -0.02
VARS-220ENST00000461874 FAM71E2Q8N5Q1 922 aa14.91□□□□□ -0.02
VARS-220ENST00000461874 TMEM203Q969S6 136 aa14.91□□□□□ -0.02
VARS-220ENST00000461874 GALMQ96C23 342 aa14.91□□□□□ -0.02
VARS-220ENST00000461874 YPEL2Q96QA6 119 aa14.91□□□□□ -0.02
VARS-220ENST00000461874 ABHD14AQ9BUJ0 271 aa14.91□□□□□ -0.02
VARS-220ENST00000461874 KCNK15Q9H427 330 aa14.91□□□□□ -0.02
VARS-220ENST00000461874 TMEM14DPA8MWL7 114 aa14.9□□□□□ -0.02
VARS-220ENST00000461874 THBS3P49746 956 aa14.9□□□□□ -0.02
VARS-220ENST00000461874 LSAMPQ13449 338 aa14.9□□□□□ -0.02
VARS-220ENST00000461874 HMGN3Q15651 99 aa14.9□□□□□ -0.02
VARS-220ENST00000461874 PNLIPRP3Q17RR3 467 aa14.9□□□□□ -0.02
VARS-220ENST00000461874 TMEM91Q6ZNR0 172 aa14.9□□□□□ -0.02
VARS-220ENST00000461874 C8orf86Q6ZUL3 223 aa14.9□□□□□ -0.02
VARS-220ENST00000461874 ODF3L1Q8IXM7 274 aa14.9□□□□□ -0.02
VARS-220ENST00000461874 OR6M1Q8NGM8 313 aa14.9□□□□□ -0.02
VARS-220ENST00000461874 NICN1Q9BSH3 213 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms