RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 CT45A3Q8NHU0 189 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 RTN4IP1Q8WWV3 396 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-207ENST00000461798 PHYHIPQ92561 330 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 SGCDQ92629 289 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 RCC1LQ96I51 464 aaKnown RBP7.23□□□□□ -1.25
BRCA1-207ENST00000461798 SELENOIQ9C0D9 397 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 ABCG5Q9H222 651 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 BANF2Q9H503 90 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 LIN7CQ9NUP9 197 aaKnown RBP7.23□□□□□ -1.25
BRCA1-207ENST00000461798 AURKAIP1Q9NWT8 199 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-207ENST00000461798 TRAPPC2LQ9UL33 140 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 LRRC42Q9Y546 428 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 IGHV3-43A0A0B4J1X8 118 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 PNMA8CA0A1B0GUJ8 204 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 SERPINE3A8MV23 424 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 AP4M1O00189 453 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 SLC31A2O15432 143 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 LANCL1O43813 399 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 PDCD6O75340 191 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 CRTAPO75718 401 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-207ENST00000461798 MOSP00540 346 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 PF4P02776 101 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 IGHV3-43DP0DP04 118 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 RCC1P18754 421 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-207ENST00000461798 REG1BP48304 166 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 RPL23AP62750 156 aaKnown RBP7.22□□□□□ -1.25
BRCA1-207ENST00000461798 SLC35A2P78381 396 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 SLC35B1P78383 322 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 HTD2P86397 168 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 IRF3Q14653 427 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 MORN2Q502X0 79 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 C6orf141Q5SZD1 244 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 OR2W3Q7Z3T1 314 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 SLC35E3Q7Z769 313 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 ZNF329Q86UD4 541 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 LRRTM1Q86UE6 522 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 FOXRED2Q8IWF2 684 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 STPG2Q8N412 459 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 LINC00482Q8N8I6 264 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 RNF152Q8N8N0 203 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 Q8N9W7 124 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 OR4K15Q8NH41 348 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 OR1L1Q8NH94 360 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 UBALD1Q8TB05 177 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 NOL4LQ96MY1 436 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-207ENST00000461798 MND1Q9BWT6 205 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 CST11Q9H112 138 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 VCXQ9H320 206 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 DCLRE1BQ9H816 532 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 TAF9BQ9HBM6 251 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 GNG12Q9UBI6 72 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 ZNF580Q9UK33 172 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 LSM2Q9Y333 95 aaKnown RBP7.22□□□□□ -1.25
BRCA1-207ENST00000461798 DNAH3Q8TD57 4116 aa7.22□□□□□ -1.25
BRCA1-207ENST00000461798 IGHV3-72A0A0B4J1Y9 119 aa7.21□□□□□ -1.26
BRCA1-207ENST00000461798 LINC01548A6NM66 108 aa7.21□□□□□ -1.26
BRCA1-207ENST00000461798 NCBP2LA6PVI3 153 aaKnown RBP7.21□□□□□ -1.26
BRCA1-207ENST00000461798 ZNF736B4DX44 427 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-207ENST00000461798 YPEL1O60688 119 aa7.21□□□□□ -1.26
BRCA1-207ENST00000461798 SRMP19623 302 aa7.21□□□□□ -1.26
BRCA1-207ENST00000461798 MYCNOSP40205 109 aa7.21□□□□□ -1.26
BRCA1-207ENST00000461798 GPR12P47775 334 aa7.21□□□□□ -1.26
BRCA1-207ENST00000461798 THBS3P49746 956 aa7.21□□□□□ -1.26
BRCA1-207ENST00000461798 EGFEM1PQ0D2K5 195 aa7.21□□□□□ -1.26
BRCA1-207ENST00000461798 SPHARQ15513 63 aa7.21□□□□□ -1.26
BRCA1-207ENST00000461798 PNLIPRP3Q17RR3 467 aa7.21□□□□□ -1.26
BRCA1-207ENST00000461798 GLT8D1Q68CQ7 371 aa7.21□□□□□ -1.26
BRCA1-207ENST00000461798 TEX38Q6PEX7 206 aa7.21□□□□□ -1.26
BRCA1-207ENST00000461798 ETV3LQ6ZN32 361 aa7.21□□□□□ -1.26
BRCA1-207ENST00000461798 MRPL41Q8IXM3 137 aaKnown RBP7.21□□□□□ -1.26
BRCA1-207ENST00000461798 OR51D1Q8NGF3 324 aa7.21□□□□□ -1.26
BRCA1-207ENST00000461798 MRPL30Q8TCC3 161 aaKnown RBP7.21□□□□□ -1.26
BRCA1-207ENST00000461798 MRAPQ8TCY5 172 aa7.21□□□□□ -1.26
BRCA1-207ENST00000461798 YPEL2Q96QA6 119 aa7.21□□□□□ -1.26
BRCA1-207ENST00000461798 S1PR3Q99500 378 aa7.21□□□□□ -1.26
BRCA1-207ENST00000461798 P2RX4Q99571 388 aa7.21□□□□□ -1.26
BRCA1-207ENST00000461798 TM2D1Q9BX74 207 aa7.21□□□□□ -1.26
BRCA1-207ENST00000461798 GON7Q9BXV9 100 aa7.21□□□□□ -1.26
BRCA1-207ENST00000461798 GPR61Q9BZJ8 451 aa7.21□□□□□ -1.26
BRCA1-207ENST00000461798 DUSP21Q9H596 190 aa7.21□□□□□ -1.26
BRCA1-207ENST00000461798 KCNIP1Q9NZI2 227 aa7.21□□□□□ -1.26
BRCA1-207ENST00000461798 UBE2QL1A1L167 161 aa7.2□□□□□ -1.26
BRCA1-207ENST00000461798 PTGES3LE9PB15 166 aa7.2□□□□□ -1.26
BRCA1-207ENST00000461798 SLC22A1O15245 554 aa7.2□□□□□ -1.26
BRCA1-207ENST00000461798 IGF1P05019 195 aa7.2□□□□□ -1.26
BRCA1-207ENST00000461798 ELANEP08246 267 aa7.2□□□□□ -1.26
BRCA1-207ENST00000461798 UCHL1P09936 223 aa7.2□□□□□ -1.26
BRCA1-207ENST00000461798 CHATP28329 748 aa7.2□□□□□ -1.26
BRCA1-207ENST00000461798 RPS27AP62979 156 aaKnown RBP7.2□□□□□ -1.26
BRCA1-207ENST00000461798 QRFPP83859 136 aa7.2□□□□□ -1.26
BRCA1-207ENST00000461798 CFHR3Q02985 330 aa7.2□□□□□ -1.26
BRCA1-207ENST00000461798 GABPB1Q06547 395 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-207ENST00000461798 TPBGQ13641 420 aa7.2□□□□□ -1.26
BRCA1-207ENST00000461798 INSL4Q14641 139 aa7.2□□□□□ -1.26
BRCA1-207ENST00000461798 ZNF880Q6PDB4 577 aa7.2□□□□□ -1.26
BRCA1-207ENST00000461798 CEACAM19Q7Z692 300 aa7.2□□□□□ -1.26
BRCA1-207ENST00000461798 ZNF695Q8IW36 515 aa7.2□□□□□ -1.26
BRCA1-207ENST00000461798 ODF3L1Q8IXM7 274 aa7.2□□□□□ -1.26
BRCA1-207ENST00000461798 FAM71E2Q8N5Q1 922 aa7.2□□□□□ -1.26
BRCA1-207ENST00000461798 OR10V1Q8NGI7 309 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms