RNA–Protein interactions for RNA: ENST00000460593.1

CPSF3-202, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 1 (best) BASIC

Gene CPSF3, Length 3,157 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-202ENST00000460593 FGFBP3Q8TAT2 258 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 MRGPRX4Q96LA9 322 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 TMEM204Q9BSN7 226 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 KIR2DL5BA0A0G2JN68 375 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 KIR2DL5BA0A0G2JPC4 375 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 DHHO43323 396 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 UCP1P25874 307 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 SRPXP78539 464 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 ACSM6Q6P461 480 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 KIR2DL5AQ8N109 375 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 MBD3L1Q8WWY6 194 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 IL1F10Q8WWZ1 152 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 SPTSSAQ969W0 71 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 ACY3Q96HD9 319 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 DERL1Q9BUN8 251 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 MRPS18CQ9Y3D5 142 aaKnown RBP10□□□□□ -0.81
CPSF3-202ENST00000460593 CBY1Q9Y3M2 126 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 AQP7P3A6NL99 342 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 PAGE4O60829 102 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 GNRH1P01148 92 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 BCL3P20749 454 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 CTSSP25774 331 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 UBE2G2P60604 165 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 C1orf53Q5VUE5 145 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 C20orf204Q6ZNR8 217 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 SPSB1Q96BD6 273 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 ULBP2Q9BZM5 246 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 TRAPPC1Q9Y5R8 145 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 KIAA1324LA8MWY0 1029 aaPredicted RBP9.99□□□□□ -0.81
CPSF3-202ENST00000460593 F2Z2F3 143 aa9.99□□□□□ -0.81
CPSF3-202ENST00000460593 TLX3O43711 291 aaPredicted RBP9.99□□□□□ -0.81
CPSF3-202ENST00000460593 NPPCP23582 126 aa9.99□□□□□ -0.81
CPSF3-202ENST00000460593 CNN3Q15417 329 aaKnown RBP9.99□□□□□ -0.81
CPSF3-202ENST00000460593 ZNF488Q96MN9 340 aa9.99□□□□□ -0.81
CPSF3-202ENST00000460593 ALKBH3Q96Q83 286 aaPredicted RBP9.99□□□□□ -0.81
CPSF3-202ENST00000460593 MANBALQ9NQG1 85 aa9.99□□□□□ -0.81
CPSF3-202ENST00000460593 IGKV1-39P01597 117 aa9.99□□□□□ -0.81
CPSF3-202ENST00000460593 IGKV1D-39P04432 117 aa9.99□□□□□ -0.81
CPSF3-202ENST00000460593 CELA2AP08217 269 aa9.99□□□□□ -0.81
CPSF3-202ENST00000460593 C1QTNF9P0C862 333 aa9.99□□□□□ -0.81
CPSF3-202ENST00000460593 BRS3P32247 399 aa9.99□□□□□ -0.81
CPSF3-202ENST00000460593 NTF4P34130 210 aa9.99□□□□□ -0.81
CPSF3-202ENST00000460593 FASLGP48023 281 aa9.99□□□□□ -0.81
CPSF3-202ENST00000460593 DPPA3Q6W0C5 159 aa9.99□□□□□ -0.81
CPSF3-202ENST00000460593 WDR5BQ86VZ2 330 aa9.99□□□□□ -0.81
CPSF3-202ENST00000460593 VN1R17PQ8TDU5 208 aa9.99□□□□□ -0.81
CPSF3-202ENST00000460593 OR5P3Q8WZ94 311 aa9.99□□□□□ -0.81
CPSF3-202ENST00000460593 PATZ1Q9HBE1 687 aaKnown RBP9.99□□□□□ -0.81
CPSF3-202ENST00000460593 PPP1R3CQ9UQK1 317 aa9.99□□□□□ -0.81
CPSF3-202ENST00000460593 NPIPA2E9PIF3 369 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 NPIPA3F8WFD2 350 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 IGHV3-9P01782 118 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 SERPINE2P07093 398 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 OTX1P32242 354 aaPredicted RBP9.98□□□□□ -0.81
CPSF3-202ENST00000460593 TMEM41BQ5BJD5 291 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 Q6ZWC4 215 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 ZNF114Q8NC26 417 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 OR2M3Q8NG83 312 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 PPP1R14DQ9NXH3 145 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 R4GN57 208 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 DOCK7Q96N67 2140 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 A0A1B0GX78 115 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 HS3ST1O14792 307 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 TOX3O15405 576 aaPredicted RBP9.98□□□□□ -0.81
CPSF3-202ENST00000460593 TIAF1O95411 115 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 PDGFBP01127 241 aaPredicted RBP9.98□□□□□ -0.81
CPSF3-202ENST00000460593 FRMD6-AS1P0C7T7 363 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 CCL2P13500 99 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 ZNF32P17041 273 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 CCNOP22674 350 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 CD38P28907 300 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 SPINK9Q5DT21 86 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 KIAA0895LQ68EN5 471 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 TMEM211Q6ICI0 200 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 SLC23A3Q6PIS1 610 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 ANKRD37Q7Z713 158 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 ZNF573Q86YE8 665 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 TGIF2LYQ8IUE0 185 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 ZNF501Q96CX3 271 aaPredicted RBP9.98□□□□□ -0.81
CPSF3-202ENST00000460593 P2RX4Q99571 388 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 FGF21Q9NSA1 209 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 RNF114Q9Y508 228 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 SIAH2O43255 324 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 SYNGR2O43760 224 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 OR10J1P30954 320 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 MPLP40238 635 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 LHFPL2Q6ZUX7 228 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 RDH5Q92781 318 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 HLA-CQ95604 372 aa9.98□□□□□ -0.81
CPSF3-202ENST00000460593 ERRFI1Q9UJM3 462 aaPredicted RBP9.98□□□□□ -0.81
CPSF3-202ENST00000460593 IFNA1P01562 189 aa9.97□□□□□ -0.81
CPSF3-202ENST00000460593 F2RP25116 425 aa9.97□□□□□ -0.81
CPSF3-202ENST00000460593 CCKARP32238 428 aa9.97□□□□□ -0.81
CPSF3-202ENST00000460593 ADMP35318 185 aa9.97□□□□□ -0.81
CPSF3-202ENST00000460593 BLKP51451 505 aa9.97□□□□□ -0.81
CPSF3-202ENST00000460593 LRRC75BQ2VPJ9 315 aa9.97□□□□□ -0.81
CPSF3-202ENST00000460593 NFAM1Q8NET5 270 aaPredicted RBP9.97□□□□□ -0.81
CPSF3-202ENST00000460593 SGCZQ96LD1 299 aa9.97□□□□□ -0.81
CPSF3-202ENST00000460593 WDR61Q9GZS3 305 aaKnown RBP9.97□□□□□ -0.81
CPSF3-202ENST00000460593 OR1A1Q9P1Q5 309 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms