RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 STMN3Q9NZ72 180 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 STX18Q9P2W9 335 aaKnown RBP1.65□□□□□ -2.15
RFC4-211ENST00000460408 HMGXB4Q9UGU5 601 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 PRO0628Q9UI54 55 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 V9GYY9 64 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 VWA8A3KMH1 1905 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 MYLKQ15746 1914 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 TNRC6BQ9UPQ9 1833 aaKnown RBP1.65□□□□□ -2.15
RFC4-211ENST00000460408 ANK2Q01484 3957 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 ZFC3H1O60293 1989 aaKnown RBP1.65□□□□□ -2.15
RFC4-211ENST00000460408 CUBNO60494 3623 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 MAP1AP78559 2803 aaPredicted RBP1.64□□□□□ -2.15
RFC4-211ENST00000460408 COL4A2P08572 1712 aa1.64□□□□□ -2.15
RFC4-211ENST00000460408 TRAV8-7A0A075B6U6 113 aa1.64□□□□□ -2.15
RFC4-211ENST00000460408 GOLGA6L4A6NEF3 574 aa1.64□□□□□ -2.15
RFC4-211ENST00000460408 TVP23AA6NH52 213 aa1.64□□□□□ -2.15
RFC4-211ENST00000460408 ZNF593O00488 134 aaPredicted RBP1.64□□□□□ -2.15
RFC4-211ENST00000460408 RFXANKO14593 260 aa1.64□□□□□ -2.15
RFC4-211ENST00000460408 PRMT5O14744 637 aaPredicted RBP1.64□□□□□ -2.15
RFC4-211ENST00000460408 VAPBO95292 243 aa1.64□□□□□ -2.15
RFC4-211ENST00000460408 RHOCP08134 193 aa1.64□□□□□ -2.15
RFC4-211ENST00000460408 SEC11BP0C7V7 166 aa1.64□□□□□ -2.15
RFC4-211ENST00000460408 OR12D2P58182 307 aa1.64□□□□□ -2.15
RFC4-211ENST00000460408 IL5RAQ01344 420 aa1.64□□□□□ -2.15
RFC4-211ENST00000460408 DEFA6Q01524 100 aa1.64□□□□□ -2.15
RFC4-211ENST00000460408 EIF3IQ13347 325 aaKnown RBP1.64□□□□□ -2.15
RFC4-211ENST00000460408 ZNF235Q14590 738 aa1.64□□□□□ -2.15
RFC4-211ENST00000460408 KCTD16Q68DU8 428 aa1.64□□□□□ -2.15
RFC4-211ENST00000460408 CLEC19AQ6UXS0 136 aa1.64□□□□□ -2.15
RFC4-211ENST00000460408 PID1Q7Z2X4 250 aa1.64□□□□□ -2.15
RFC4-211ENST00000460408 CALHM3Q86XJ0 350 aa1.64□□□□□ -2.15
RFC4-211ENST00000460408 SGPP2Q8IWX5 399 aa1.64□□□□□ -2.15
RFC4-211ENST00000460408 ASCC1Q8N9N2 400 aaKnown RBP1.64□□□□□ -2.15
RFC4-211ENST00000460408 SGMS2Q8NHU3 365 aa1.64□□□□□ -2.15
RFC4-211ENST00000460408 CIDECQ96AQ7 238 aaPredicted RBP1.64□□□□□ -2.15
RFC4-211ENST00000460408 PEBP4Q96S96 227 aa1.64□□□□□ -2.15
RFC4-211ENST00000460408 PLA2G12AQ9BZM1 189 aa1.64□□□□□ -2.15
RFC4-211ENST00000460408 SHCBP1LQ9BZQ2 653 aa1.64□□□□□ -2.15
RFC4-211ENST00000460408 API5Q9BZZ5 524 aaKnown RBP1.64□□□□□ -2.15
RFC4-211ENST00000460408 AP3M1Q9Y2T2 418 aa1.64□□□□□ -2.15
RFC4-211ENST00000460408 KLF13Q9Y2Y9 288 aaPredicted RBP1.64□□□□□ -2.15
RFC4-211ENST00000460408 ACOT9Q9Y305 439 aa1.64□□□□□ -2.15
RFC4-211ENST00000460408 SHANK1Q9Y566 2161 aa1.64□□□□□ -2.15
RFC4-211ENST00000460408 POLEQ07864 2286 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 APODP05090 189 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 GP1BAP07359 652 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 PTNP21246 168 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 SNAP25P60880 206 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 CEACAM16Q2WEN9 425 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 ZNF404Q494X3 552 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 SYT6Q5T7P8 510 aaPredicted RBP1.63□□□□□ -2.15
RFC4-211ENST00000460408 ZFAND6Q6FIF0 208 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 THOC7Q6I9Y2 204 aaKnown RBP1.63□□□□□ -2.15
RFC4-211ENST00000460408 FAM231DQ6ZW35 169 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 FA2HQ7L5A8 372 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 FAM19A1Q7Z5A9 133 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 ITPRIPQ8IWB1 547 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 GAPTQ8N292 157 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 SYS1Q8N2H4 156 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 ITLN2Q8WWU7 325 aaPredicted RBP1.63□□□□□ -2.15
RFC4-211ENST00000460408 YIPF6Q96EC8 236 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 TCEAL4Q96EI5 215 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 RILPQ96NA2 401 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 UTP23Q9BRU9 249 aaKnown RBP1.63□□□□□ -2.15
RFC4-211ENST00000460408 SHANK2-AS3Q9BTD1 123 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 MRPL20Q9BYC9 149 aaKnown RBP1.63□□□□□ -2.15
RFC4-211ENST00000460408 SYT4Q9H2B2 425 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 ASB7Q9H672 318 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 ANKHQ9HCJ1 492 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 ZNF302Q9NR11 478 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 ZNF492Q9P255 531 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 SLC22A7Q9Y694 548 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 BZW2Q9Y6E2 419 aaKnown RBP1.63□□□□□ -2.15
RFC4-211ENST00000460408 CEP192Q8TEP8 1941 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 BAZ2AQ9UIF9 1905 aaKnown RBP1.63□□□□□ -2.15
RFC4-211ENST00000460408 PLXND1Q9Y4D7 1925 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 ZGRF1Q86YA3 2104 aa1.63□□□□□ -2.15
RFC4-211ENST00000460408 VPS13CQ709C8 3753 aa1.62□□□□□ -2.15
RFC4-211ENST00000460408 DOCK6Q96HP0 2047 aa1.62□□□□□ -2.15
RFC4-211ENST00000460408 SEC16AO15027 2179 aa1.62□□□□□ -2.15
RFC4-211ENST00000460408 PRRC2CQ9Y520 2896 aaKnown RBP1.62□□□□□ -2.15
RFC4-211ENST00000460408 HELZP42694 1942 aaKnown RBP1.62□□□□□ -2.15
RFC4-211ENST00000460408 A0A1W2PNN7 141 aa1.62□□□□□ -2.15
RFC4-211ENST00000460408 SLC5A10A0PJK1 596 aa1.62□□□□□ -2.15
RFC4-211ENST00000460408 OR6C70A6NIJ9 312 aa1.62□□□□□ -2.15
RFC4-211ENST00000460408 RNF113AO15541 343 aaKnown RBP1.62□□□□□ -2.15
RFC4-211ENST00000460408 TRAPPC3O43617 180 aa1.62□□□□□ -2.15
RFC4-211ENST00000460408 DHRS3O75911 302 aa1.62□□□□□ -2.15
RFC4-211ENST00000460408 KCNK2O95069 426 aa1.62□□□□□ -2.15
RFC4-211ENST00000460408 NRASP01111 189 aa1.62□□□□□ -2.15
RFC4-211ENST00000460408 HRASP01112 189 aa1.62□□□□□ -2.15
RFC4-211ENST00000460408 KRASP01116 189 aa1.62□□□□□ -2.15
RFC4-211ENST00000460408 CD8AP01732 235 aa1.62□□□□□ -2.15
RFC4-211ENST00000460408 SNRPAP09012 282 aaKnown RBP1.62□□□□□ -2.15
RFC4-211ENST00000460408 P0C880 135 aa1.62□□□□□ -2.15
RFC4-211ENST00000460408 BGNP21810 368 aa1.62□□□□□ -2.15
RFC4-211ENST00000460408 GPR4P46093 362 aa1.62□□□□□ -2.15
RFC4-211ENST00000460408 RPL10AP62906 217 aaKnown RBP1.62□□□□□ -2.15
RFC4-211ENST00000460408 XIAPP98170 497 aa1.62□□□□□ -2.15
RFC4-211ENST00000460408 SRSF6Q13247 344 aaKnown RBP1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms