RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 UTF1Q5T230 341 aa17.54■□□□□ 0.4
SSNA1-202ENST00000459860 IDNKQ5T6J7 187 aa17.54■□□□□ 0.4
SSNA1-202ENST00000459860 C3orf56Q8N813 242 aa17.54■□□□□ 0.4
SSNA1-202ENST00000459860 C8orf31Q8N9H6 132 aa17.54■□□□□ 0.4
SSNA1-202ENST00000459860 OR13F1Q8NGS4 319 aa17.54■□□□□ 0.4
SSNA1-202ENST00000459860 LGALS14Q8TCE9 139 aa17.54■□□□□ 0.4
SSNA1-202ENST00000459860 FUNDC2Q9BWH2 189 aa17.54■□□□□ 0.4
SSNA1-202ENST00000459860 BEX1Q9HBH7 125 aa17.54■□□□□ 0.4
SSNA1-202ENST00000459860 OR2S2Q9NQN1 319 aa17.54■□□□□ 0.4
SSNA1-202ENST00000459860 JPT1Q9UK76 154 aa17.54■□□□□ 0.4
SSNA1-202ENST00000459860 TCF19Q9Y242 345 aa17.54■□□□□ 0.4
SSNA1-202ENST00000459860 TRBV6-6A0A0A6YYG2 114 aa17.53■□□□□ 0.4
SSNA1-202ENST00000459860 A0A1B0GUS0 222 aa17.53■□□□□ 0.4
SSNA1-202ENST00000459860 POM121CA8CG34 1229 aa17.53■□□□□ 0.4
SSNA1-202ENST00000459860 RGS11O94810 467 aa17.53■□□□□ 0.4
SSNA1-202ENST00000459860 SNRPBP14678 240 aaKnown RBP17.53■□□□□ 0.4
SSNA1-202ENST00000459860 RAB13P51153 203 aa17.53■□□□□ 0.4
SSNA1-202ENST00000459860 HTD2P86397 168 aa17.53■□□□□ 0.4
SSNA1-202ENST00000459860 HMGN3Q15651 99 aa17.53■□□□□ 0.4
SSNA1-202ENST00000459860 PLAC9Q5JTB6 97 aa17.53■□□□□ 0.4
SSNA1-202ENST00000459860 LINC00311Q8N616 119 aa17.53■□□□□ 0.4
SSNA1-202ENST00000459860 OR10V1Q8NGI7 309 aa17.53■□□□□ 0.4
SSNA1-202ENST00000459860 ETV7Q9Y603 341 aa17.53■□□□□ 0.4
SSNA1-202ENST00000459860 A0A075B6Q4 140 aa17.52■□□□□ 0.4
SSNA1-202ENST00000459860 A0A1W2PPE3 182 aa17.52■□□□□ 0.4
SSNA1-202ENST00000459860 LPLP06858 475 aa17.52■□□□□ 0.4
SSNA1-202ENST00000459860 RAB7AP51149 207 aa17.52■□□□□ 0.4
SSNA1-202ENST00000459860 MOGAT2Q3SYC2 334 aa17.52■□□□□ 0.4
SSNA1-202ENST00000459860 ZNF880Q6PDB4 577 aa17.52■□□□□ 0.4
SSNA1-202ENST00000459860 SGMS2Q8NHU3 365 aa17.52■□□□□ 0.4
SSNA1-202ENST00000459860 PIFOQ8TCI5 191 aa17.52■□□□□ 0.4
SSNA1-202ENST00000459860 IL1F10Q8WWZ1 152 aa17.52■□□□□ 0.4
SSNA1-202ENST00000459860 PHF21AQ96BD5 680 aa17.52■□□□□ 0.4
SSNA1-202ENST00000459860 OCSTAMPQ9BR26 566 aa17.52■□□□□ 0.4
SSNA1-202ENST00000459860 HDHD3Q9BSH5 251 aaPredicted RBP17.52■□□□□ 0.4
SSNA1-202ENST00000459860 SERPINE3A8MV23 424 aa17.51■□□□□ 0.39
SSNA1-202ENST00000459860 LY6LH3BQJ8 138 aa17.51■□□□□ 0.39
SSNA1-202ENST00000459860 RAB27BO00194 218 aa17.51■□□□□ 0.39
SSNA1-202ENST00000459860 HIST1H1DP16402 221 aaKnown RBP17.51■□□□□ 0.39
SSNA1-202ENST00000459860 HLA-DRB3P79483 266 aa17.51■□□□□ 0.39
SSNA1-202ENST00000459860 STEAP3Q658P3 488 aa17.51■□□□□ 0.39
SSNA1-202ENST00000459860 DTX3Q8N9I9 347 aa17.51■□□□□ 0.39
SSNA1-202ENST00000459860 OR4C13Q8NGP0 309 aa17.51■□□□□ 0.39
SSNA1-202ENST00000459860 TAF15Q92804 592 aaKnown RBP eCLIP17.51■□□□□ 0.39
SSNA1-202ENST00000459860 RHBDL2Q9NX52 303 aa17.51■□□□□ 0.39
SSNA1-202ENST00000459860 MFNGO00587 321 aa17.5■□□□□ 0.39
SSNA1-202ENST00000459860 HSD17B6O14756 317 aa17.5■□□□□ 0.39
SSNA1-202ENST00000459860 GNB3P16520 340 aa17.5■□□□□ 0.39
SSNA1-202ENST00000459860 MDKP21741 143 aaPredicted RBP17.5■□□□□ 0.39
SSNA1-202ENST00000459860 TGFBR1P36897 503 aa17.5■□□□□ 0.39
SSNA1-202ENST00000459860 TALDO1P37837 337 aa17.5■□□□□ 0.39
SSNA1-202ENST00000459860 SERPINB10P48595 397 aa17.5■□□□□ 0.39
SSNA1-202ENST00000459860 RELBQ01201 579 aa17.5■□□□□ 0.39
SSNA1-202ENST00000459860 ARFRP1Q13795 201 aa17.5■□□□□ 0.39
SSNA1-202ENST00000459860 OLFML2AQ68BL7 652 aa17.5■□□□□ 0.39
SSNA1-202ENST00000459860 OR8H3Q8N146 312 aa17.5■□□□□ 0.39
SSNA1-202ENST00000459860 OR52L2PQ8NGH6 319 aa17.5■□□□□ 0.39
SSNA1-202ENST00000459860 CAPSLQ8WWF8 208 aa17.5■□□□□ 0.39
SSNA1-202ENST00000459860 NPFFR1Q9GZQ6 430 aa17.5■□□□□ 0.39
SSNA1-202ENST00000459860 MMP24Q9Y5R2 645 aa17.5■□□□□ 0.39
SSNA1-202ENST00000459860 MGAM2Q2M2H8 2515 aa17.5■□□□□ 0.39
SSNA1-202ENST00000459860 A6NDX4 124 aa17.49■□□□□ 0.39
SSNA1-202ENST00000459860 SLC25A48Q6ZT89 311 aaKnown RBP17.49■□□□□ 0.39
SSNA1-202ENST00000459860 GPR141Q7Z602 305 aa17.49■□□□□ 0.39
SSNA1-202ENST00000459860 TMEM219Q86XT9 240 aa17.49■□□□□ 0.39
SSNA1-202ENST00000459860 AKR1E2Q96JD6 320 aa17.49■□□□□ 0.39
SSNA1-202ENST00000459860 ABHD14AQ9BUJ0 271 aa17.49■□□□□ 0.39
SSNA1-202ENST00000459860 RANBP3Q9H6Z4 567 aaPredicted RBP17.49■□□□□ 0.39
SSNA1-202ENST00000459860 Q9N2K0 584 aa17.49■□□□□ 0.39
SSNA1-202ENST00000459860 TRRAPQ9Y4A5 3859 aa17.48■□□□□ 0.39
SSNA1-202ENST00000459860 CLPSL1A2RUU4 121 aa17.48■□□□□ 0.39
SSNA1-202ENST00000459860 YPEL1O60688 119 aa17.48■□□□□ 0.39
SSNA1-202ENST00000459860 GAPDHP04406 335 aaKnown RBP17.48■□□□□ 0.39
SSNA1-202ENST00000459860 PPP1CCP36873 323 aaKnown RBP17.48■□□□□ 0.39
SSNA1-202ENST00000459860 RPS19P39019 145 aaKnown RBP17.48■□□□□ 0.39
SSNA1-202ENST00000459860 GNMTQ14749 295 aa17.48■□□□□ 0.39
SSNA1-202ENST00000459860 MORN2Q502X0 79 aa17.48■□□□□ 0.39
SSNA1-202ENST00000459860 FAM53AQ6NSI3 398 aaPredicted RBP17.48■□□□□ 0.39
SSNA1-202ENST00000459860 Q6ZSV7 163 aa17.48■□□□□ 0.39
SSNA1-202ENST00000459860 ZNF439Q8NDP4 499 aa17.48■□□□□ 0.39
SSNA1-202ENST00000459860 OR2AK2Q8NG84 335 aa17.48■□□□□ 0.39
SSNA1-202ENST00000459860 YPEL2Q96QA6 119 aa17.48■□□□□ 0.39
SSNA1-202ENST00000459860 SLC31A2O15432 143 aa17.47■□□□□ 0.39
SSNA1-202ENST00000459860 HSPA12AO43301 675 aa17.47■□□□□ 0.39
SSNA1-202ENST00000459860 TXNL1O43396 289 aa17.47■□□□□ 0.39
SSNA1-202ENST00000459860 CHST1O43916 411 aa17.47■□□□□ 0.39
SSNA1-202ENST00000459860 KIR2DS4P43632 304 aa17.47■□□□□ 0.39
SSNA1-202ENST00000459860 VBP1P61758 197 aa17.47■□□□□ 0.39
SSNA1-202ENST00000459860 NCS1P62166 190 aa17.47■□□□□ 0.39
SSNA1-202ENST00000459860 ZNF816Q0VGE8 651 aaPredicted RBP17.47■□□□□ 0.39
SSNA1-202ENST00000459860 KIR2DS1Q14954 304 aa17.47■□□□□ 0.39
SSNA1-202ENST00000459860 LY6G6FQ5SQ64 297 aa17.47■□□□□ 0.39
SSNA1-202ENST00000459860 Q6ZPA2 131 aa17.47■□□□□ 0.39
SSNA1-202ENST00000459860 C16orf82Q7Z2V1 217 aa17.47■□□□□ 0.39
SSNA1-202ENST00000459860 SPATA2Q9UM82 520 aa17.47■□□□□ 0.39
SSNA1-202ENST00000459860 KCNK7Q9Y2U2 307 aa17.47■□□□□ 0.39
SSNA1-202ENST00000459860 A0A1W2PPI3 338 aa17.46■□□□□ 0.39
SSNA1-202ENST00000459860 TRDCB7Z8K6 153 aa17.46■□□□□ 0.39
SSNA1-202ENST00000459860 TIMM23O14925 209 aa17.46■□□□□ 0.39
SSNA1-202ENST00000459860 TSPAN9O75954 239 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms